RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 TMEM14BQ9NUH8 114 aa9.49□□□□□ -0.89
SYNGAP1-201ENST00000293748 MLANAQ16655 118 aa9.49□□□□□ -0.89
SYNGAP1-201ENST00000293748 CYYR1Q96J86 154 aa9.49□□□□□ -0.89
SYNGAP1-201ENST00000293748 GAFA1Q96PS6 74 aa9.49□□□□□ -0.89
SYNGAP1-201ENST00000293748 LINC00205P59089 165 aa9.48□□□□□ -0.89
SYNGAP1-201ENST00000293748 IL15RAQ13261 267 aa9.48□□□□□ -0.89
SYNGAP1-201ENST00000293748 LYPD6BQ8NI32 183 aa9.48□□□□□ -0.89
SYNGAP1-201ENST00000293748 RCHY1Q96PM5 261 aa9.48□□□□□ -0.89
SYNGAP1-201ENST00000293748 DSPP15924 2871 aaKnown RBP9.48□□□□□ -0.89
SYNGAP1-201ENST00000293748 LEPROTO15243 131 aa9.48□□□□□ -0.89
SYNGAP1-201ENST00000293748 LMO1P25800 156 aa9.48□□□□□ -0.89
SYNGAP1-201ENST00000293748 C9orf153Q5TBE3 101 aa9.48□□□□□ -0.89
SYNGAP1-201ENST00000293748 DTX2Q86UW9 622 aa9.48□□□□□ -0.89
SYNGAP1-201ENST00000293748 SMIM27A0A1W2PRY6 76 aa9.48□□□□□ -0.89
SYNGAP1-201ENST00000293748 NPC2P61916 151 aa9.48□□□□□ -0.89
SYNGAP1-201ENST00000293748 TAL2Q16559 108 aa9.48□□□□□ -0.89
SYNGAP1-201ENST00000293748 BVES-AS1Q5T3Y7 98 aa9.48□□□□□ -0.89
SYNGAP1-201ENST00000293748 Q8N8P6 123 aa9.48□□□□□ -0.89
SYNGAP1-201ENST00000293748 H3BMM0 161 aa9.48□□□□□ -0.89
SYNGAP1-201ENST00000293748 ZNF415Q09FC8 603 aa9.48□□□□□ -0.89
SYNGAP1-201ENST00000293748 UBE2WQ96B02 151 aa9.48□□□□□ -0.89
SYNGAP1-201ENST00000293748 IGKV1-16P04430 117 aa9.47□□□□□ -0.89
SYNGAP1-201ENST00000293748 CFHR2P36980 270 aa9.47□□□□□ -0.89
SYNGAP1-201ENST00000293748 VMO1Q7Z5L0 202 aa9.47□□□□□ -0.89
SYNGAP1-201ENST00000293748 A0A1W2PPM0 123 aa9.47□□□□□ -0.89
SYNGAP1-201ENST00000293748 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.47□□□□□ -0.89
SYNGAP1-201ENST00000293748 PRB4P10163 310 aaPredicted RBP9.47□□□□□ -0.89
SYNGAP1-201ENST00000293748 C1orf122Q6ZSJ8 110 aa9.47□□□□□ -0.89
SYNGAP1-201ENST00000293748 MBD6Q96DN6 1003 aa9.47□□□□□ -0.89
SYNGAP1-201ENST00000293748 LRRK2Q5S007 2527 aa9.47□□□□□ -0.89
SYNGAP1-201ENST00000293748 A0A1W2PPI3 338 aa9.47□□□□□ -0.89
SYNGAP1-201ENST00000293748 BUB1B-PAK6H3BSN5 160 aa9.47□□□□□ -0.89
SYNGAP1-201ENST00000293748 CMC4P56277 68 aaPredicted RBP9.47□□□□□ -0.89
SYNGAP1-201ENST00000293748 KIR2DL5BA0A0G2JN68 375 aa9.46□□□□□ -0.89
SYNGAP1-201ENST00000293748 KIR2DL5BA0A0G2JPC4 375 aa9.46□□□□□ -0.89
SYNGAP1-201ENST00000293748 TMEM213A2RRL7 107 aa9.46□□□□□ -0.89
SYNGAP1-201ENST00000293748 SIVA1O15304 175 aa9.46□□□□□ -0.89
SYNGAP1-201ENST00000293748 PRSS57Q6UWY2 283 aa9.46□□□□□ -0.89
SYNGAP1-201ENST00000293748 C2orf66Q6UXQ4 117 aa9.46□□□□□ -0.89
SYNGAP1-201ENST00000293748 PRIMA1Q86XR5 153 aa9.46□□□□□ -0.89
SYNGAP1-201ENST00000293748 KIR2DL5AQ8N109 375 aa9.46□□□□□ -0.89
SYNGAP1-201ENST00000293748 M0R1W7 72 aa9.46□□□□□ -0.89
SYNGAP1-201ENST00000293748 NCOA6Q14686 2063 aaPredicted RBP9.46□□□□□ -0.9
SYNGAP1-201ENST00000293748 ZNF48Q96MX3 618 aaPredicted RBP9.46□□□□□ -0.9
SYNGAP1-201ENST00000293748 LAMTOR3Q9UHA4 124 aa9.46□□□□□ -0.9
SYNGAP1-201ENST00000293748 GAGE12HA6NDE8 117 aa9.46□□□□□ -0.9
SYNGAP1-201ENST00000293748 TMEM141Q96I45 108 aa9.46□□□□□ -0.9
SYNGAP1-201ENST00000293748 ATP6V0BQ99437 205 aa9.46□□□□□ -0.9
SYNGAP1-201ENST00000293748 PRADC1Q9BSG0 188 aa9.46□□□□□ -0.9
SYNGAP1-201ENST00000293748 IGKV1-39P01597 117 aa9.45□□□□□ -0.9
SYNGAP1-201ENST00000293748 IGKV1D-39P04432 117 aa9.45□□□□□ -0.9
SYNGAP1-201ENST00000293748 ZNF688P0C7X2 276 aa9.45□□□□□ -0.9
SYNGAP1-201ENST00000293748 GAGE2AQ6NT46 116 aa9.45□□□□□ -0.9
SYNGAP1-201ENST00000293748 ZNF114Q8NC26 417 aa9.45□□□□□ -0.9
SYNGAP1-201ENST00000293748 USMG5Q96IX5 58 aa9.45□□□□□ -0.9
SYNGAP1-201ENST00000293748 NDUFB8O95169 186 aa9.45□□□□□ -0.9
SYNGAP1-201ENST00000293748 HTN3P15516 51 aa9.45□□□□□ -0.9
SYNGAP1-201ENST00000293748 SRD5A1P18405 259 aa9.45□□□□□ -0.9
SYNGAP1-201ENST00000293748 OR11H6Q8NGC7 330 aa9.45□□□□□ -0.9
SYNGAP1-201ENST00000293748 NDUFA4L2Q9NRX3 87 aa9.45□□□□□ -0.9
SYNGAP1-201ENST00000293748 TRBV19A0A075B6N1 114 aa9.44□□□□□ -0.9
SYNGAP1-201ENST00000293748 Q96MF0 132 aa9.44□□□□□ -0.9
SYNGAP1-201ENST00000293748 TRPT1Q86TN4 253 aaKnown RBP9.44□□□□□ -0.9
SYNGAP1-201ENST00000293748 PYGO2Q9BRQ0 406 aa9.44□□□□□ -0.9
SYNGAP1-201ENST00000293748 SPXQ9BT56 116 aa9.44□□□□□ -0.9
SYNGAP1-201ENST00000293748 LINC00527Q9UJ94 153 aa9.44□□□□□ -0.9
SYNGAP1-201ENST00000293748 A0A087WX48 190 aa9.44□□□□□ -0.9
SYNGAP1-201ENST00000293748 VWC2LB2RUY7 222 aa9.44□□□□□ -0.9
SYNGAP1-201ENST00000293748 CDKN1BP46527 198 aa9.44□□□□□ -0.9
SYNGAP1-201ENST00000293748 PMVKQ15126 192 aa9.44□□□□□ -0.9
SYNGAP1-201ENST00000293748 WFDC12Q8WWY7 111 aa9.44□□□□□ -0.9
SYNGAP1-201ENST00000293748 NRGNQ92686 78 aa9.44□□□□□ -0.9
SYNGAP1-201ENST00000293748 C1orf159Q96HA4 380 aa9.44□□□□□ -0.9
SYNGAP1-201ENST00000293748 ERCC8Q13216 396 aa9.44□□□□□ -0.9
SYNGAP1-201ENST00000293748 ARFGEF3Q5TH69 2177 aa9.44□□□□□ -0.9
SYNGAP1-201ENST00000293748 ZNF503-AS2A6NEH8 195 aa9.43□□□□□ -0.9
SYNGAP1-201ENST00000293748 MRPL51Q4U2R6 128 aaKnown RBP9.43□□□□□ -0.9
SYNGAP1-201ENST00000293748 C6orf226Q5I0X4 101 aa9.43□□□□□ -0.9
SYNGAP1-201ENST00000293748 FCN3O75636 299 aa9.43□□□□□ -0.9
SYNGAP1-201ENST00000293748 TP53TG1Q9Y2A0 90 aa9.43□□□□□ -0.9
SYNGAP1-201ENST00000293748 ABCA4P78363 2273 aa9.43□□□□□ -0.9
SYNGAP1-201ENST00000293748 IGFL4Q6B9Z1 124 aa9.43□□□□□ -0.9
SYNGAP1-201ENST00000293748 C22orf34Q6ZV56 151 aa9.43□□□□□ -0.9
SYNGAP1-201ENST00000293748 FRYQ5TBA9 3013 aa9.43□□□□□ -0.9
SYNGAP1-201ENST00000293748 IGLV3-9A0A075B6K5 115 aa9.43□□□□□ -0.9
SYNGAP1-201ENST00000293748 FAM223BA6NKX1 122 aa9.43□□□□□ -0.9
SYNGAP1-201ENST00000293748 F8VRH5 84 aa9.43□□□□□ -0.9
SYNGAP1-201ENST00000293748 HAPLN4Q86UW8 402 aa9.43□□□□□ -0.9
SYNGAP1-201ENST00000293748 FAM223AQ8IWN6 122 aa9.43□□□□□ -0.9
SYNGAP1-201ENST00000293748 TMEM14CQ9P0S9 112 aa9.43□□□□□ -0.9
SYNGAP1-201ENST00000293748 DMDP11532 3685 aa9.42□□□□□ -0.9
SYNGAP1-201ENST00000293748 MGAQ8IWI9 3026 aa9.42□□□□□ -0.9
SYNGAP1-201ENST00000293748 NDPQ00604 133 aa9.42□□□□□ -0.9
SYNGAP1-201ENST00000293748 UTF1Q5T230 341 aa9.42□□□□□ -0.9
SYNGAP1-201ENST00000293748 VGLL1Q99990 258 aa9.42□□□□□ -0.9
SYNGAP1-201ENST00000293748 LCNL1Q6ZST4 164 aa9.42□□□□□ -0.9
SYNGAP1-201ENST00000293748 SIGLEC8Q9NYZ4 499 aa9.42□□□□□ -0.9
SYNGAP1-201ENST00000293748 PRO1854Q9UHT4 67 aa9.42□□□□□ -0.9
SYNGAP1-201ENST00000293748 DCHS1Q96JQ0 3298 aa9.42□□□□□ -0.9
SYNGAP1-201ENST00000293748 NOTCH2Q04721 2471 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms