RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 IGLC1P0CG04 106 aa6.51□□□□□ -1.37
PTPDC1-201ENST00000288976 CENPWQ5EE01 88 aa6.51□□□□□ -1.37
PTPDC1-201ENST00000288976 C19orf35Q6ZS72 473 aa6.51□□□□□ -1.37
PTPDC1-201ENST00000288976 CCDC140Q96MF4 163 aa6.51□□□□□ -1.37
PTPDC1-201ENST00000288976 GPR61Q9BZJ8 451 aa6.51□□□□□ -1.37
PTPDC1-201ENST00000288976 GAGE12BA1L429 117 aa6.51□□□□□ -1.37
PTPDC1-201ENST00000288976 GAGE7O76087 117 aa6.51□□□□□ -1.37
PTPDC1-201ENST00000288976 LGALS1P09382 135 aaKnown RBP6.51□□□□□ -1.37
PTPDC1-201ENST00000288976 GAGE12FP0CL80 117 aa6.51□□□□□ -1.37
PTPDC1-201ENST00000288976 GAGE12GP0CL81 117 aa6.51□□□□□ -1.37
PTPDC1-201ENST00000288976 GAGE12IP0CL82 117 aa6.51□□□□□ -1.37
PTPDC1-201ENST00000288976 PRO1933Q9H354 126 aa6.51□□□□□ -1.37
PTPDC1-201ENST00000288976 Q9H3A6 140 aa6.51□□□□□ -1.37
PTPDC1-201ENST00000288976 IGKV2-40A0A087WW87 121 aaPredicted RBP6.51□□□□□ -1.37
PTPDC1-201ENST00000288976 C7orf77A4D0Y5 90 aa6.51□□□□□ -1.37
PTPDC1-201ENST00000288976 IGKV2D-40P01614 121 aaPredicted RBP6.51□□□□□ -1.37
PTPDC1-201ENST00000288976 LGALS3P17931 250 aaKnown RBP6.51□□□□□ -1.37
PTPDC1-201ENST00000288976 PRR20EP86478 221 aa6.51□□□□□ -1.37
PTPDC1-201ENST00000288976 PRR20CP86479 221 aa6.51□□□□□ -1.37
PTPDC1-201ENST00000288976 PRR20DP86480 221 aa6.51□□□□□ -1.37
PTPDC1-201ENST00000288976 PRR20BP86481 221 aa6.51□□□□□ -1.37
PTPDC1-201ENST00000288976 PRR20AP86496 221 aa6.51□□□□□ -1.37
PTPDC1-201ENST00000288976 PRADC1Q9BSG0 188 aa6.51□□□□□ -1.37
PTPDC1-201ENST00000288976 PAM16Q9Y3D7 125 aa6.51□□□□□ -1.37
PTPDC1-201ENST00000288976 TEX15Q9BXT5 2789 aa6.51□□□□□ -1.37
PTPDC1-201ENST00000288976 IGHV3-64A0A075B6Q5 118 aa6.5□□□□□ -1.37
PTPDC1-201ENST00000288976 A0A0J9YY99 117 aa6.5□□□□□ -1.37
PTPDC1-201ENST00000288976 ZNF98A6NK75 572 aa6.5□□□□□ -1.37
PTPDC1-201ENST00000288976 PROK1P58294 105 aa6.5□□□□□ -1.37
PTPDC1-201ENST00000288976 TMEM136Q6ZRR5 245 aa6.5□□□□□ -1.37
PTPDC1-201ENST00000288976 RAB37Q96AX2 223 aa6.5□□□□□ -1.37
PTPDC1-201ENST00000288976 SCRT1Q9BWW7 348 aa6.5□□□□□ -1.37
PTPDC1-201ENST00000288976 GGTLC1Q9BX51 225 aa6.5□□□□□ -1.37
PTPDC1-201ENST00000288976 IFITM10A6NMD0 228 aa6.5□□□□□ -1.37
PTPDC1-201ENST00000288976 FABP5P3A8MUU1 101 aa6.5□□□□□ -1.37
PTPDC1-201ENST00000288976 DIRC3C9JPN6 131 aa6.5□□□□□ -1.37
PTPDC1-201ENST00000288976 COTL1Q14019 142 aa6.5□□□□□ -1.37
PTPDC1-201ENST00000288976 EXOC3-AS1Q8N2X6 119 aa6.5□□□□□ -1.37
PTPDC1-201ENST00000288976 SVEP1Q4LDE5 3571 aa6.5□□□□□ -1.37
PTPDC1-201ENST00000288976 TRAV5A0A0B4J249 113 aa6.5□□□□□ -1.37
PTPDC1-201ENST00000288976 SLC17A3O00476 420 aa6.5□□□□□ -1.37
PTPDC1-201ENST00000288976 PEX7O00628 323 aa6.5□□□□□ -1.37
PTPDC1-201ENST00000288976 CDX1P47902 265 aaPredicted RBP6.5□□□□□ -1.37
PTPDC1-201ENST00000288976 ZNF876PQ49A33 203 aa6.5□□□□□ -1.37
PTPDC1-201ENST00000288976 CBLN2Q8IUK8 224 aa6.5□□□□□ -1.37
PTPDC1-201ENST00000288976 WI2-2373I1.2A0A1W2PRP0 233 aa6.5□□□□□ -1.37
PTPDC1-201ENST00000288976 RPLP1P05386 114 aaKnown RBP6.5□□□□□ -1.37
PTPDC1-201ENST00000288976 PAPPA-AS1Q5QFB9 102 aa6.5□□□□□ -1.37
PTPDC1-201ENST00000288976 TSSC4Q9Y5U2 329 aaPredicted RBP6.5□□□□□ -1.37
PTPDC1-201ENST00000288976 DEFB4AO15263 64 aa6.49□□□□□ -1.37
PTPDC1-201ENST00000288976 HOXD3P31249 432 aaPredicted RBP6.49□□□□□ -1.37
PTPDC1-201ENST00000288976 LCN12Q6JVE5 192 aa6.49□□□□□ -1.37
PTPDC1-201ENST00000288976 MRPL32Q9BYC8 188 aaKnown RBP6.49□□□□□ -1.37
PTPDC1-201ENST00000288976 DAZ1Q9NQZ3 744 aaKnown RBP6.49□□□□□ -1.37
PTPDC1-201ENST00000288976 IGKV1OR2-108A0A075B7D4 117 aa6.49□□□□□ -1.37
PTPDC1-201ENST00000288976 TRBV7-9A0A0J9YWB2 115 aa6.49□□□□□ -1.37
PTPDC1-201ENST00000288976 A0A1B0GV72 72 aa6.49□□□□□ -1.37
PTPDC1-201ENST00000288976 CTSGP08311 255 aa6.49□□□□□ -1.37
PTPDC1-201ENST00000288976 PNRC1Q12796 327 aaPredicted RBP6.49□□□□□ -1.37
PTPDC1-201ENST00000288976 TMEM190Q8WZ59 177 aa6.49□□□□□ -1.37
PTPDC1-201ENST00000288976 MRPL36Q9P0J6 103 aaKnown RBP6.49□□□□□ -1.37
PTPDC1-201ENST00000288976 TRAV13-1A0A0B4J241 112 aa6.49□□□□□ -1.37
PTPDC1-201ENST00000288976 TRAV21A0A0B4J279 112 aa6.49□□□□□ -1.37
PTPDC1-201ENST00000288976 ADARB2-AS1A8MUL3 147 aa6.49□□□□□ -1.37
PTPDC1-201ENST00000288976 EREGO14944 169 aa6.49□□□□□ -1.37
PTPDC1-201ENST00000288976 DNAL4O96015 105 aa6.49□□□□□ -1.37
PTPDC1-201ENST00000288976 PRB2P02812 416 aaPredicted RBP6.49□□□□□ -1.37
PTPDC1-201ENST00000288976 RPL36AP83881 106 aaKnown RBP6.49□□□□□ -1.37
PTPDC1-201ENST00000288976 SFTA2Q6UW10 78 aa6.49□□□□□ -1.37
PTPDC1-201ENST00000288976 FER1L6-AS1Q8NA97 138 aa6.49□□□□□ -1.37
PTPDC1-201ENST00000288976 RPL36ALQ969Q0 106 aaKnown RBP6.49□□□□□ -1.37
PTPDC1-201ENST00000288976 TMEM70Q9BUB7 260 aa6.49□□□□□ -1.37
PTPDC1-201ENST00000288976 LINC01619G3V211 115 aa6.48□□□□□ -1.37
PTPDC1-201ENST00000288976 NDUFA4O00483 81 aa6.48□□□□□ -1.37
PTPDC1-201ENST00000288976 RPS20P60866 119 aaKnown RBP6.48□□□□□ -1.37
PTPDC1-201ENST00000288976 NDUFA11Q86Y39 141 aa6.48□□□□□ -1.37
PTPDC1-201ENST00000288976 NXT2Q9NPJ8 142 aaKnown RBP6.48□□□□□ -1.37
PTPDC1-201ENST00000288976 ZANQ9Y493 2812 aa6.48□□□□□ -1.37
PTPDC1-201ENST00000288976 TRAV8-1A0A0A6YYK1 113 aa6.48□□□□□ -1.37
PTPDC1-201ENST00000288976 A6NDN8 102 aa6.48□□□□□ -1.37
PTPDC1-201ENST00000288976 IGKV1-17P01599 117 aa6.48□□□□□ -1.37
PTPDC1-201ENST00000288976 SRIP30626 198 aa6.48□□□□□ -1.37
PTPDC1-201ENST00000288976 SLC50A1Q9BRV3 221 aa6.48□□□□□ -1.37
PTPDC1-201ENST00000288976 TRAV12-2A0A075B6T6 113 aa6.48□□□□□ -1.37
PTPDC1-201ENST00000288976 CCL24O00175 119 aa6.48□□□□□ -1.37
PTPDC1-201ENST00000288976 LGALS9O00182 355 aa6.48□□□□□ -1.37
PTPDC1-201ENST00000288976 LINC00518Q8N0U6 118 aa6.48□□□□□ -1.37
PTPDC1-201ENST00000288976 ATOH7Q8N100 152 aa6.48□□□□□ -1.37
PTPDC1-201ENST00000288976 RCC1LQ96I51 464 aaKnown RBP6.48□□□□□ -1.37
PTPDC1-201ENST00000288976 VCX2Q9H322 139 aa6.48□□□□□ -1.37
PTPDC1-201ENST00000288976 LEPROTL1O95214 131 aa6.48□□□□□ -1.37
PTPDC1-201ENST00000288976 ZNF414Q96IQ9 312 aa6.48□□□□□ -1.37
PTPDC1-201ENST00000288976 A0A087WWL8 130 aa6.47□□□□□ -1.37
PTPDC1-201ENST00000288976 GAGE12JA6NER3 117 aa6.47□□□□□ -1.37
PTPDC1-201ENST00000288976 EVI2AP22794 236 aa6.47□□□□□ -1.37
PTPDC1-201ENST00000288976 ATP5G3P48201 142 aa6.47□□□□□ -1.37
PTPDC1-201ENST00000288976 SNRPEP62304 92 aaKnown RBP6.47□□□□□ -1.37
PTPDC1-201ENST00000288976 GAGE1Q13065 139 aa6.47□□□□□ -1.37
PTPDC1-201ENST00000288976 GAGE4Q13068 117 aa6.47□□□□□ -1.37
PTPDC1-201ENST00000288976 GAGE5Q13069 117 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 127.3 ms