RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 HIST2H2BEQ16778 126 aa12.25□□□□□ -0.45
TPM1-201ENST00000267996 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.25□□□□□ -0.45
TPM1-201ENST00000267996 RBPMS2Q6ZRY4 209 aaKnown RBP12.25□□□□□ -0.45
TPM1-201ENST00000267996 ATP5L2Q7Z4Y8 100 aa12.25□□□□□ -0.45
TPM1-201ENST00000267996 NDUFA11Q86Y39 141 aa12.25□□□□□ -0.45
TPM1-201ENST00000267996 ZFAND2AQ8N6M9 145 aa12.25□□□□□ -0.45
TPM1-201ENST00000267996 HIST1H2BHQ93079 126 aa12.25□□□□□ -0.45
TPM1-201ENST00000267996 HIST1H2BNQ99877 126 aa12.25□□□□□ -0.45
TPM1-201ENST00000267996 HIST1H2BMQ99879 126 aa12.25□□□□□ -0.45
TPM1-201ENST00000267996 GNB1LQ9BYB4 327 aa12.25□□□□□ -0.45
TPM1-201ENST00000267996 TMEM189A5PLL7 270 aa12.24□□□□□ -0.45
TPM1-201ENST00000267996 SPINK4O60575 86 aa12.24□□□□□ -0.45
TPM1-201ENST00000267996 TRGC1P0CF51 173 aa12.24□□□□□ -0.45
TPM1-201ENST00000267996 GZMBP10144 247 aa12.24□□□□□ -0.45
TPM1-201ENST00000267996 ZNF575Q86XF7 245 aa12.24□□□□□ -0.45
TPM1-201ENST00000267996 APRG1Q8IVJ8 170 aa12.24□□□□□ -0.45
TPM1-201ENST00000267996 TMEM61Q8N0U2 210 aa12.24□□□□□ -0.45
TPM1-201ENST00000267996 SAV1Q9H4B6 383 aaPredicted RBP12.24□□□□□ -0.45
TPM1-201ENST00000267996 TRAPPC1Q9Y5R8 145 aa12.24□□□□□ -0.45
TPM1-201ENST00000267996 A0A1B0GXF2 115 aa12.23□□□□□ -0.45
TPM1-201ENST00000267996 CYSRT1A8MQ03 144 aa12.23□□□□□ -0.45
TPM1-201ENST00000267996 CRISP2P16562 243 aa12.23□□□□□ -0.45
TPM1-201ENST00000267996 RPS20P60866 119 aaKnown RBP12.23□□□□□ -0.45
TPM1-201ENST00000267996 FABP9Q0Z7S8 132 aa12.23□□□□□ -0.45
TPM1-201ENST00000267996 PSMG4Q5JS54 123 aa12.23□□□□□ -0.45
TPM1-201ENST00000267996 MRPL54Q6P161 138 aaKnown RBP12.23□□□□□ -0.45
TPM1-201ENST00000267996 WDR73Q6P4I2 378 aa12.23□□□□□ -0.45
TPM1-201ENST00000267996 TMEM136Q6ZRR5 245 aa12.23□□□□□ -0.45
TPM1-201ENST00000267996 DYNLRB2Q8TF09 96 aa12.23□□□□□ -0.45
TPM1-201ENST00000267996 WNK1Q9H4A3 2382 aa12.23□□□□□ -0.45
TPM1-201ENST00000267996 TRAV25A0A0B4J276 109 aa12.22□□□□□ -0.45
TPM1-201ENST00000267996 LINC01559Q495D7 138 aa12.22□□□□□ -0.45
TPM1-201ENST00000267996 A0A0J9YX75 114 aa12.22□□□□□ -0.45
TPM1-201ENST00000267996 XKRY2A2RUG3 117 aa12.22□□□□□ -0.45
TPM1-201ENST00000267996 MT-ND6P03923 174 aa12.22□□□□□ -0.45
TPM1-201ENST00000267996 PRR9Q5T870 116 aa12.22□□□□□ -0.45
TPM1-201ENST00000267996 Q6AWC8 147 aa12.22□□□□□ -0.45
TPM1-201ENST00000267996 PGLYRP4Q96LB8 373 aa12.22□□□□□ -0.45
TPM1-201ENST00000267996 ODF3Q96PU9 254 aa12.22□□□□□ -0.45
TPM1-201ENST00000267996 C5orf52A6NGY3 159 aa12.21□□□□□ -0.45
TPM1-201ENST00000267996 SNURFLB1AK76 121 aa12.21□□□□□ -0.45
TPM1-201ENST00000267996 NSUN5P1Q3KNT7 163 aa12.21□□□□□ -0.45
TPM1-201ENST00000267996 CD300EQ496F6 205 aaPredicted RBP12.21□□□□□ -0.45
TPM1-201ENST00000267996 GDF5OSQ5U4N7 250 aa12.21□□□□□ -0.45
TPM1-201ENST00000267996 SORL1Q92673 2214 aa12.21□□□□□ -0.45
TPM1-201ENST00000267996 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.2□□□□□ -0.46
TPM1-201ENST00000267996 SPAG8Q99932 426 aaPredicted RBP12.2□□□□□ -0.46
TPM1-201ENST00000267996 MRPL18Q9H0U6 180 aaKnown RBP12.2□□□□□ -0.46
TPM1-201ENST00000267996 C11orf21Q9P2W6 132 aa12.2□□□□□ -0.46
TPM1-201ENST00000267996 HLA-DQA1P01909 254 aa12.19□□□□□ -0.46
TPM1-201ENST00000267996 S100A6P06703 90 aa12.19□□□□□ -0.46
TPM1-201ENST00000267996 FOXI2Q6ZQN5 318 aa12.19□□□□□ -0.46
TPM1-201ENST00000267996 TMSB15BA0A087X1C1 80 aa12.19□□□□□ -0.46
TPM1-201ENST00000267996 IGKV3D-20A0A0C4DH25 116 aa12.19□□□□□ -0.46
TPM1-201ENST00000267996 KLLNB2CW77 178 aa12.19□□□□□ -0.46
TPM1-201ENST00000267996 ORM1P02763 201 aa12.19□□□□□ -0.46
TPM1-201ENST00000267996 IGLC6P0CF74 106 aa12.19□□□□□ -0.46
TPM1-201ENST00000267996 SNRPEP62304 92 aaKnown RBP12.19□□□□□ -0.46
TPM1-201ENST00000267996 EBLN2Q6P2I7 272 aa12.19□□□□□ -0.46
TPM1-201ENST00000267996 ZNF256Q9Y2P7 627 aaPredicted RBP12.19□□□□□ -0.46
TPM1-201ENST00000267996 A0A1B0GUT8 65 aa12.18□□□□□ -0.46
TPM1-201ENST00000267996 DUSP14O95147 198 aaKnown RBP12.18□□□□□ -0.46
TPM1-201ENST00000267996 CD33P20138 364 aa12.18□□□□□ -0.46
TPM1-201ENST00000267996 HBBP68871 147 aa12.18□□□□□ -0.46
TPM1-201ENST00000267996 TRAV21A0A0B4J279 112 aa12.17□□□□□ -0.46
TPM1-201ENST00000267996 OR4C46A6NHA9 309 aa12.17□□□□□ -0.46
TPM1-201ENST00000267996 A8MTW9 85 aa12.17□□□□□ -0.46
TPM1-201ENST00000267996 GPX1P07203 203 aa12.17□□□□□ -0.46
TPM1-201ENST00000267996 CTRLP40313 264 aa12.17□□□□□ -0.46
TPM1-201ENST00000267996 Q6ZQT7 251 aa12.17□□□□□ -0.46
TPM1-201ENST00000267996 JMJD1CQ15652 2540 aa12.17□□□□□ -0.46
TPM1-201ENST00000267996 ARMS2P0C7Q2 107 aa12.16□□□□□ -0.46
TPM1-201ENST00000267996 NDUFA6P56556 154 aa12.16□□□□□ -0.46
TPM1-201ENST00000267996 DEFB131AP59861 70 aa12.16□□□□□ -0.46
TPM1-201ENST00000267996 RAB4BP61018 213 aa12.16□□□□□ -0.46
TPM1-201ENST00000267996 COA6Q5JTJ3 125 aaKnown RBP12.16□□□□□ -0.46
TPM1-201ENST00000267996 FER1L6-AS1Q8NA97 138 aa12.16□□□□□ -0.46
TPM1-201ENST00000267996 GATD1Q8NB37 220 aa12.16□□□□□ -0.46
TPM1-201ENST00000267996 A0A1B0GW15 77 aa12.16□□□□□ -0.46
TPM1-201ENST00000267996 UBE2CO00762 179 aa12.16□□□□□ -0.46
TPM1-201ENST00000267996 HOXA5P20719 270 aa12.16□□□□□ -0.46
TPM1-201ENST00000267996 LEPP41159 167 aa12.16□□□□□ -0.46
TPM1-201ENST00000267996 CAMPP49913 170 aa12.16□□□□□ -0.46
TPM1-201ENST00000267996 RIGQ13278 110 aa12.16□□□□□ -0.46
TPM1-201ENST00000267996 KIR3DS1Q14943 382 aa12.16□□□□□ -0.46
TPM1-201ENST00000267996 LYZL1Q6UWQ5 148 aa12.16□□□□□ -0.46
TPM1-201ENST00000267996 AMTNQ6UX39 209 aa12.16□□□□□ -0.46
TPM1-201ENST00000267996 MAP6D1Q9H9H5 199 aa12.16□□□□□ -0.46
TPM1-201ENST00000267996 RNASE4P34096 147 aaKnown RBP12.15□□□□□ -0.46
TPM1-201ENST00000267996 LINC00482Q8N8I6 264 aa12.15□□□□□ -0.46
TPM1-201ENST00000267996 CNFNQ9BYD5 112 aa12.15□□□□□ -0.46
TPM1-201ENST00000267996 AGRNO00468 2067 aa12.15□□□□□ -0.46
TPM1-201ENST00000267996 NIPBLQ6KC79 2804 aaeCLIP12.14□□□□□ -0.47
TPM1-201ENST00000267996 GRIFINA4D1Z8 144 aa12.14□□□□□ -0.47
TPM1-201ENST00000267996 J3KRW8 73 aa12.14□□□□□ -0.47
TPM1-201ENST00000267996 IGLV1-51P01701 117 aa12.14□□□□□ -0.47
TPM1-201ENST00000267996 APCSP02743 223 aa12.14□□□□□ -0.47
TPM1-201ENST00000267996 HLA-DRB4P13762 266 aa12.14□□□□□ -0.47
TPM1-201ENST00000267996 SLAQ13239 276 aa12.14□□□□□ -0.47
TPM1-201ENST00000267996 OR2K2Q8NGT1 345 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 152.3 ms