RNA–Protein interactions for RNA: ENST00000263071.8

SCARF1-201, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCARF1, Length 3,443 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-201ENST00000263071 HIGD1AQ9Y241 93 aa11.21□□□□□ -0.62
SCARF1-201ENST00000263071 J3KT08 172 aa11.21□□□□□ -0.62
SCARF1-201ENST00000263071 ASIPP42127 132 aa11.21□□□□□ -0.62
SCARF1-201ENST00000263071 PSMG4Q5JS54 123 aa11.21□□□□□ -0.62
SCARF1-201ENST00000263071 ZC2HC1BQ5TFG8 222 aa11.21□□□□□ -0.62
SCARF1-201ENST00000263071 ANKRD29Q8N6D5 301 aa11.21□□□□□ -0.62
SCARF1-201ENST00000263071 C17orf77Q96MU5 243 aa11.21□□□□□ -0.62
SCARF1-201ENST00000263071 IGHV3OR16-13A0A075B7E8 117 aa11.2□□□□□ -0.62
SCARF1-201ENST00000263071 IGHV3-74A0A0B4J1X5 117 aa11.2□□□□□ -0.62
SCARF1-201ENST00000263071 LINC01548A6NM66 108 aa11.2□□□□□ -0.62
SCARF1-201ENST00000263071 M0R3E3 92 aa11.2□□□□□ -0.62
SCARF1-201ENST00000263071 FAM167A-AS1Q96KT0 104 aa11.2□□□□□ -0.62
SCARF1-201ENST00000263071 DSCAML1Q8TD84 2053 aa11.2□□□□□ -0.62
SCARF1-201ENST00000263071 A0A1W2PPI3 338 aa11.2□□□□□ -0.62
SCARF1-201ENST00000263071 CD40P25942 277 aa11.2□□□□□ -0.62
SCARF1-201ENST00000263071 C9orf153Q5TBE3 101 aa11.2□□□□□ -0.62
SCARF1-201ENST00000263071 RIGQ13278 110 aa11.19□□□□□ -0.62
SCARF1-201ENST00000263071 C15orf53Q8NAA6 179 aa11.19□□□□□ -0.62
SCARF1-201ENST00000263071 OR4C13Q8NGP0 309 aa11.19□□□□□ -0.62
SCARF1-201ENST00000263071 Q9H3A6 140 aa11.19□□□□□ -0.62
SCARF1-201ENST00000263071 LINC01549A6NIU2 74 aa11.19□□□□□ -0.62
SCARF1-201ENST00000263071 VMA21Q3ZAQ7 101 aa11.19□□□□□ -0.62
SCARF1-201ENST00000263071 CHCHD5Q9BSY4 110 aa11.19□□□□□ -0.62
SCARF1-201ENST00000263071 A0A1B0GUT8 65 aa11.19□□□□□ -0.62
SCARF1-201ENST00000263071 BSPH1Q075Z2 132 aa11.19□□□□□ -0.62
SCARF1-201ENST00000263071 TAL2Q16559 108 aa11.19□□□□□ -0.62
SCARF1-201ENST00000263071 ZFP2Q6ZN57 461 aa11.19□□□□□ -0.62
SCARF1-201ENST00000263071 SLC25A48Q6ZT89 311 aaKnown RBP11.19□□□□□ -0.62
SCARF1-201ENST00000263071 EDA2RQ9HAV5 297 aa11.19□□□□□ -0.62
SCARF1-201ENST00000263071 TMEM160Q9NX00 188 aa11.19□□□□□ -0.62
SCARF1-201ENST00000263071 C21orf62Q9NYP8 219 aa11.19□□□□□ -0.62
SCARF1-201ENST00000263071 NPFFO15130 113 aa11.18□□□□□ -0.62
SCARF1-201ENST00000263071 IGKCP01834 107 aa11.18□□□□□ -0.62
SCARF1-201ENST00000263071 C2orf83Q53S99 150 aa11.18□□□□□ -0.62
SCARF1-201ENST00000263071 PRR30Q53SZ7 412 aaPredicted RBP11.18□□□□□ -0.62
SCARF1-201ENST00000263071 RASL10AQ92737 203 aa11.18□□□□□ -0.62
SCARF1-201ENST00000263071 NDUFS7O75251 213 aa11.18□□□□□ -0.62
SCARF1-201ENST00000263071 IGLV1-44P01699 117 aa11.18□□□□□ -0.62
SCARF1-201ENST00000263071 SRSF9Q13242 221 aaKnown RBP eCLIP11.18□□□□□ -0.62
SCARF1-201ENST00000263071 TNFRSF1AP19438 455 aa11.17□□□□□ -0.62
SCARF1-201ENST00000263071 RPL27AP46776 148 aaKnown RBP11.17□□□□□ -0.62
SCARF1-201ENST00000263071 FXYD5Q96DB9 178 aa11.17□□□□□ -0.62
SCARF1-201ENST00000263071 MRPL32Q9BYC8 188 aaKnown RBP11.17□□□□□ -0.62
SCARF1-201ENST00000263071 NDUFA4L2Q9NRX3 87 aa11.17□□□□□ -0.62
SCARF1-201ENST00000263071 CGB1A6NKQ9 187 aa11.16□□□□□ -0.62
SCARF1-201ENST00000263071 FAM215AQ9Y5M1 114 aa11.16□□□□□ -0.62
SCARF1-201ENST00000263071 IGHG3P01860 377 aa11.16□□□□□ -0.62
SCARF1-201ENST00000263071 Q6Q795 121 aa11.16□□□□□ -0.62
SCARF1-201ENST00000263071 A0A096LNJ9 63 aa11.16□□□□□ -0.62
SCARF1-201ENST00000263071 SMKR1H3BMG3 65 aa11.16□□□□□ -0.62
SCARF1-201ENST00000263071 NCBP2LA6PVI3 153 aaKnown RBP11.15□□□□□ -0.62
SCARF1-201ENST00000263071 D6R8Y8 96 aa11.15□□□□□ -0.62
SCARF1-201ENST00000263071 DUX5Q96PT3 197 aa11.15□□□□□ -0.62
SCARF1-201ENST00000263071 PRADC1Q9BSG0 188 aa11.15□□□□□ -0.62
SCARF1-201ENST00000263071 SIGLEC9Q9Y336 463 aa11.15□□□□□ -0.62
SCARF1-201ENST00000263071 IGHV3-66A0A0C4DH42 116 aa11.15□□□□□ -0.62
SCARF1-201ENST00000263071 ARMS2P0C7Q2 107 aa11.15□□□□□ -0.62
SCARF1-201ENST00000263071 TMEM155Q4W5P6 130 aa11.15□□□□□ -0.62
SCARF1-201ENST00000263071 FOXC2Q99958 501 aa11.15□□□□□ -0.62
SCARF1-201ENST00000263071 AAMDCQ9H7C9 122 aa11.15□□□□□ -0.62
SCARF1-201ENST00000263071 IGHV3-49A0A0A0MS15 119 aa11.15□□□□□ -0.63
SCARF1-201ENST00000263071 HAX1O00165 279 aa11.15□□□□□ -0.63
SCARF1-201ENST00000263071 DEFB104AQ8WTQ1 72 aa11.15□□□□□ -0.63
SCARF1-201ENST00000263071 RAXQ9Y2V3 346 aa11.15□□□□□ -0.63
SCARF1-201ENST00000263071 TRAV8-4A0A0B4J246 113 aa11.14□□□□□ -0.63
SCARF1-201ENST00000263071 MYMXA0A1B0GTQ4 84 aa11.14□□□□□ -0.63
SCARF1-201ENST00000263071 MORN3Q6PF18 240 aaPredicted RBP11.14□□□□□ -0.63
SCARF1-201ENST00000263071 TMEM158Q8WZ71 300 aa11.14□□□□□ -0.63
SCARF1-201ENST00000263071 DOPEY2Q9Y3R5 2298 aa11.14□□□□□ -0.63
SCARF1-201ENST00000263071 TRAV2A0A0B4J234 112 aa11.14□□□□□ -0.63
SCARF1-201ENST00000263071 OOSP1A8MZH6 123 aa11.14□□□□□ -0.63
SCARF1-201ENST00000263071 DPM2O94777 84 aa11.14□□□□□ -0.63
SCARF1-201ENST00000263071 LHBP01229 141 aa11.14□□□□□ -0.63
SCARF1-201ENST00000263071 CGB3P0DN86 165 aa11.14□□□□□ -0.63
SCARF1-201ENST00000263071 CGB7P0DN87 165 aa11.14□□□□□ -0.63
SCARF1-201ENST00000263071 TWIST1Q15672 202 aa11.14□□□□□ -0.63
SCARF1-201ENST00000263071 CT83Q5H943 113 aa11.14□□□□□ -0.63
SCARF1-201ENST00000263071 MDFICQ9P1T7 246 aa11.14□□□□□ -0.63
SCARF1-201ENST00000263071 PTPRQQ9UMZ3 2332 aa11.14□□□□□ -0.63
SCARF1-201ENST00000263071 PIP4P1Q86T03 277 aa11.13□□□□□ -0.63
SCARF1-201ENST00000263071 GFRA4Q9GZZ7 299 aa11.13□□□□□ -0.63
SCARF1-201ENST00000263071 LINC01587Q99440 93 aa11.13□□□□□ -0.63
SCARF1-201ENST00000263071 SPTBN4Q9H254 2564 aa11.13□□□□□ -0.63
SCARF1-201ENST00000263071 C17orf100A8MU93 164 aa11.13□□□□□ -0.63
SCARF1-201ENST00000263071 TNFRSF6BO95407 300 aa11.13□□□□□ -0.63
SCARF1-201ENST00000263071 TCRAP04437 139 aa11.13□□□□□ -0.63
SCARF1-201ENST00000263071 FOXC1Q12948 553 aa11.13□□□□□ -0.63
SCARF1-201ENST00000263071 LRRC75A-AS1Q8N1F1 130 aa11.13□□□□□ -0.63
SCARF1-201ENST00000263071 MAPKAPK5-AS1Q8N8E1 139 aa11.13□□□□□ -0.63
SCARF1-201ENST00000263071 IGKV1D-37A0A075B6S9 117 aa11.12□□□□□ -0.63
SCARF1-201ENST00000263071 HERVK_113P63121 156 aa11.12□□□□□ -0.63
SCARF1-201ENST00000263071 Q8TAT8 98 aa11.12□□□□□ -0.63
SCARF1-201ENST00000263071 CUBNO60494 3623 aa11.12□□□□□ -0.63
SCARF1-201ENST00000263071 TMEM101Q96IK0 257 aa11.12□□□□□ -0.63
SCARF1-201ENST00000263071 CTSZQ9UBR2 303 aa11.12□□□□□ -0.63
SCARF1-201ENST00000263071 TNRC6BQ9UPQ9 1833 aaKnown RBP11.12□□□□□ -0.63
SCARF1-201ENST00000263071 ASCL5Q7RTU5 278 aa11.12□□□□□ -0.63
SCARF1-201ENST00000263071 ORMDL3Q8N138 153 aa11.12□□□□□ -0.63
SCARF1-201ENST00000263071 FAM57AQ8TBR7 257 aa11.11□□□□□ -0.63
SCARF1-201ENST00000263071 CSPG4Q6UVK1 2322 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms