RNA–Protein interactions for RNA: ENST00000262539.7

PTPN3-201, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 5 BASIC

Gene PTPN3, Length 6,832 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-201ENST00000262539 SSBP2P81877 361 aaPredicted RBP6.5□□□□□ -1.37
PTPN3-201ENST00000262539 TEX43Q6ZNM6 134 aa6.5□□□□□ -1.37
PTPN3-201ENST00000262539 GRNP28799 593 aaKnown RBP6.5□□□□□ -1.37
PTPN3-201ENST00000262539 SPATA31B1PQ5VZV4 182 aa6.5□□□□□ -1.37
PTPN3-201ENST00000262539 CHD7Q9P2D1 2997 aa6.5□□□□□ -1.37
PTPN3-201ENST00000262539 LINC00587B1AMM8 73 aa6.5□□□□□ -1.37
PTPN3-201ENST00000262539 TEX22C9J3V5 150 aa6.5□□□□□ -1.37
PTPN3-201ENST00000262539 WIPF2Q8TF74 440 aaPredicted RBP6.5□□□□□ -1.37
PTPN3-201ENST00000262539 VWC2LB2RUY7 222 aa6.5□□□□□ -1.37
PTPN3-201ENST00000262539 F2Z2F3 143 aa6.5□□□□□ -1.37
PTPN3-201ENST00000262539 NDUFS5O43920 106 aa6.5□□□□□ -1.37
PTPN3-201ENST00000262539 IGHG2P01859 326 aa6.5□□□□□ -1.37
PTPN3-201ENST00000262539 TMEM75Q8N9X5 138 aa6.5□□□□□ -1.37
PTPN3-201ENST00000262539 HIGD1CA8MV81 97 aa6.5□□□□□ -1.37
PTPN3-201ENST00000262539 UBE2CO00762 179 aa6.5□□□□□ -1.37
PTPN3-201ENST00000262539 MBD6Q96DN6 1003 aa6.5□□□□□ -1.37
PTPN3-201ENST00000262539 IGHV3-16A0A0C4DH30 117 aa6.49□□□□□ -1.37
PTPN3-201ENST00000262539 A0A1B0GWB2 263 aa6.49□□□□□ -1.37
PTPN3-201ENST00000262539 GAGE12JA6NER3 117 aa6.49□□□□□ -1.37
PTPN3-201ENST00000262539 GAGE1Q13065 139 aa6.49□□□□□ -1.37
PTPN3-201ENST00000262539 GAGE4Q13068 117 aa6.49□□□□□ -1.37
PTPN3-201ENST00000262539 GAGE5Q13069 117 aa6.49□□□□□ -1.37
PTPN3-201ENST00000262539 GAGE13Q4V321 117 aa6.49□□□□□ -1.37
PTPN3-201ENST00000262539 ORMDL2Q53FV1 153 aa6.49□□□□□ -1.37
PTPN3-201ENST00000262539 K7EIM0 57 aa6.49□□□□□ -1.37
PTPN3-201ENST00000262539 HIST1H4AP62805 103 aaKnown RBP6.49□□□□□ -1.37
PTPN3-201ENST00000262539 CD300EQ496F6 205 aaPredicted RBP6.49□□□□□ -1.37
PTPN3-201ENST00000262539 ZNF491Q8N8L2 437 aa6.49□□□□□ -1.37
PTPN3-201ENST00000262539 OCC1Q8TAD7 63 aa6.49□□□□□ -1.37
PTPN3-201ENST00000262539 LINC00477Q96M19 166 aa6.49□□□□□ -1.37
PTPN3-201ENST00000262539 RHPN1-AS1Q9BWJ2 59 aa6.49□□□□□ -1.37
PTPN3-201ENST00000262539 C9JQL5 133 aa6.49□□□□□ -1.37
PTPN3-201ENST00000262539 MED13LQ71F56 2210 aa6.49□□□□□ -1.37
PTPN3-201ENST00000262539 TRAV8-2A0A0B4J237 113 aa6.49□□□□□ -1.37
PTPN3-201ENST00000262539 GAGE12BA1L429 117 aa6.49□□□□□ -1.37
PTPN3-201ENST00000262539 GAGE7O76087 117 aa6.49□□□□□ -1.37
PTPN3-201ENST00000262539 GAGE12FP0CL80 117 aa6.49□□□□□ -1.37
PTPN3-201ENST00000262539 GAGE12GP0CL81 117 aa6.49□□□□□ -1.37
PTPN3-201ENST00000262539 GAGE12IP0CL82 117 aa6.49□□□□□ -1.37
PTPN3-201ENST00000262539 HOXB4P17483 251 aaPredicted RBP6.49□□□□□ -1.37
PTPN3-201ENST00000262539 SRSF3P84103 164 aaKnown RBP6.49□□□□□ -1.37
PTPN3-201ENST00000262539 SPRNQ5BIV9 151 aa6.49□□□□□ -1.37
PTPN3-201ENST00000262539 SNHG12Q9BXW3 62 aa6.49□□□□□ -1.37
PTPN3-201ENST00000262539 RBMY1FQ15415 496 aaKnown RBP6.49□□□□□ -1.37
PTPN3-201ENST00000262539 MYO9AB2RTY4 2548 aa6.48□□□□□ -1.37
PTPN3-201ENST00000262539 ZFYVE26Q68DK2 2539 aa6.48□□□□□ -1.37
PTPN3-201ENST00000262539 TRAV8-4A0A0B4J246 113 aa6.48□□□□□ -1.37
PTPN3-201ENST00000262539 HIVEP3Q5T1R4 2406 aa6.48□□□□□ -1.37
PTPN3-201ENST00000262539 IGKV1OR2-108A0A075B7D4 117 aa6.48□□□□□ -1.37
PTPN3-201ENST00000262539 AZU1P20160 251 aa6.48□□□□□ -1.37
PTPN3-201ENST00000262539 IGFL4Q6B9Z1 124 aa6.48□□□□□ -1.37
PTPN3-201ENST00000262539 ZNF625Q96I27 306 aaPredicted RBP6.48□□□□□ -1.37
PTPN3-201ENST00000262539 IGHV7-81A0A0B4J1V7 117 aa6.48□□□□□ -1.37
PTPN3-201ENST00000262539 Q0VG73 95 aa6.48□□□□□ -1.37
PTPN3-201ENST00000262539 DAZ1Q9NQZ3 744 aaKnown RBP6.48□□□□□ -1.37
PTPN3-201ENST00000262539 PLA2G2EQ9NZK7 142 aa6.48□□□□□ -1.37
PTPN3-201ENST00000262539 IGKV2D-24A0A075B6R9 120 aa6.48□□□□□ -1.37
PTPN3-201ENST00000262539 A0A087WWL8 130 aa6.48□□□□□ -1.37
PTPN3-201ENST00000262539 LEPROTO15243 131 aa6.48□□□□□ -1.37
PTPN3-201ENST00000262539 DPM2O94777 84 aa6.48□□□□□ -1.37
PTPN3-201ENST00000262539 AMBPP02760 352 aa6.48□□□□□ -1.37
PTPN3-201ENST00000262539 KLF17Q5JT82 389 aaPredicted RBP6.48□□□□□ -1.37
PTPN3-201ENST00000262539 Q8N9W7 124 aa6.48□□□□□ -1.37
PTPN3-201ENST00000262539 IGF2BP2-AS1Q96M15 143 aa6.48□□□□□ -1.37
PTPN3-201ENST00000262539 SSBP4Q9BWG4 385 aaPredicted RBP6.48□□□□□ -1.37
PTPN3-201ENST00000262539 RNASE7Q9H1E1 156 aaKnown RBP6.48□□□□□ -1.37
PTPN3-201ENST00000262539 ZNRD1Q9P1U0 126 aa6.48□□□□□ -1.37
PTPN3-201ENST00000262539 A0A1B0GUS0 222 aa6.47□□□□□ -1.37
PTPN3-201ENST00000262539 Q9HAA7 133 aa6.47□□□□□ -1.37
PTPN3-201ENST00000262539 A0A087X0K7 114 aa6.47□□□□□ -1.37
PTPN3-201ENST00000262539 Q86TA4 180 aa6.47□□□□□ -1.37
PTPN3-201ENST00000262539 GP9P14770 177 aa6.47□□□□□ -1.37
PTPN3-201ENST00000262539 LAGE3Q14657 143 aa6.47□□□□□ -1.37
PTPN3-201ENST00000262539 FAM167A-AS1Q96KT0 104 aa6.47□□□□□ -1.37
PTPN3-201ENST00000262539 ATXN8Q156A1 80 aa6.47□□□□□ -1.37
PTPN3-201ENST00000262539 CITED2Q99967 270 aaPredicted RBP6.47□□□□□ -1.37
PTPN3-201ENST00000262539 TRAV5A0A0B4J249 113 aa6.46□□□□□ -1.37
PTPN3-201ENST00000262539 IGHV4-61A0A0C4DH41 118 aa6.46□□□□□ -1.37
PTPN3-201ENST00000262539 TEX48A0A1B0GUV7 120 aa6.46□□□□□ -1.37
PTPN3-201ENST00000262539 WI2-2373I1.2A0A1W2PRP0 233 aa6.46□□□□□ -1.37
PTPN3-201ENST00000262539 FXYD5Q96DB9 178 aa6.46□□□□□ -1.37
PTPN3-201ENST00000262539 ZNF462Q96JM2 2506 aa6.46□□□□□ -1.37
PTPN3-201ENST00000262539 USP9XQ93008 2570 aaPredicted RBP6.46□□□□□ -1.37
PTPN3-201ENST00000262539 TRBV25-1A0A075B6N4 114 aa6.46□□□□□ -1.37
PTPN3-201ENST00000262539 PGPEP1LA6NFU8 196 aa6.46□□□□□ -1.37
PTPN3-201ENST00000262539 KNCNA6PVL3 124 aa6.46□□□□□ -1.37
PTPN3-201ENST00000262539 IGKCP01834 107 aa6.46□□□□□ -1.37
PTPN3-201ENST00000262539 SRSF2Q01130 221 aaKnown RBP6.46□□□□□ -1.37
PTPN3-201ENST00000262539 DEFB113Q30KQ7 82 aa6.46□□□□□ -1.37
PTPN3-201ENST00000262539 LINC00518Q8N0U6 118 aa6.46□□□□□ -1.37
PTPN3-201ENST00000262539 ORAOV1Q8WV07 137 aa6.46□□□□□ -1.37
PTPN3-201ENST00000262539 TMEM158Q8WZ71 300 aa6.46□□□□□ -1.37
PTPN3-201ENST00000262539 LOC105371267A0A1B0GV96 52 aa6.46□□□□□ -1.38
PTPN3-201ENST00000262539 CLPSL2Q6UWE3 100 aa6.46□□□□□ -1.38
PTPN3-201ENST00000262539 COL27A1Q8IZC6 1860 aaPredicted RBP6.46□□□□□ -1.38
PTPN3-201ENST00000262539 TRAV25A0A0B4J276 109 aa6.46□□□□□ -1.38
PTPN3-201ENST00000262539 H3BMM0 161 aa6.46□□□□□ -1.38
PTPN3-201ENST00000262539 TNFRSF6BO95407 300 aa6.46□□□□□ -1.38
PTPN3-201ENST00000262539 MRPL52Q86TS9 123 aaKnown RBP6.46□□□□□ -1.38
PTPN3-201ENST00000262539 EXOC3-AS1Q8N2X6 119 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms