RNA–Protein interactions for RNA: ENST00000261438.9

KLF3-201, Transcript of Kruppel like factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KLF3, Length 5,122 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLF3-201ENST00000261438 A0A1B0GXF2 115 aa13.75□□□□□ -0.21
KLF3-201ENST00000261438 UTF1Q5T230 341 aa13.75□□□□□ -0.21
KLF3-201ENST00000261438 C20orf78Q9BR46 151 aa13.75□□□□□ -0.21
KLF3-201ENST00000261438 IGLV2-8P01709 118 aa13.74□□□□□ -0.21
KLF3-201ENST00000261438 LEPROTO15243 131 aa13.74□□□□□ -0.21
KLF3-201ENST00000261438 DIAPH2-AS1Q14236 149 aa13.74□□□□□ -0.21
KLF3-201ENST00000261438 ZNF491Q8N8L2 437 aa13.74□□□□□ -0.21
KLF3-201ENST00000261438 ZNF625Q96I27 306 aaPredicted RBP13.74□□□□□ -0.21
KLF3-201ENST00000261438 TRBV7-1A0A0A6YYK4 115 aa13.74□□□□□ -0.21
KLF3-201ENST00000261438 TRAV41A0A0B4J266 112 aa13.74□□□□□ -0.21
KLF3-201ENST00000261438 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.74□□□□□ -0.21
KLF3-201ENST00000261438 SDHAF1A6NFY7 115 aa13.74□□□□□ -0.21
KLF3-201ENST00000261438 ITLN2Q8WWU7 325 aaPredicted RBP13.74□□□□□ -0.21
KLF3-201ENST00000261438 OBSL1O75147 1896 aa13.74□□□□□ -0.21
KLF3-201ENST00000261438 VMO1Q7Z5L0 202 aa13.73□□□□□ -0.21
KLF3-201ENST00000261438 RNF183Q96D59 192 aa13.73□□□□□ -0.21
KLF3-201ENST00000261438 ATP6V0E2Q8NHE4 81 aa13.73□□□□□ -0.21
KLF3-201ENST00000261438 PRIMA1Q86XR5 153 aa13.73□□□□□ -0.21
KLF3-201ENST00000261438 LINC00311Q8N616 119 aa13.73□□□□□ -0.21
KLF3-201ENST00000261438 P0C879 139 aa13.72□□□□□ -0.21
KLF3-201ENST00000261438 DOPEY2Q9Y3R5 2298 aa13.72□□□□□ -0.21
KLF3-201ENST00000261438 OOSP1A8MZH6 123 aa13.72□□□□□ -0.21
KLF3-201ENST00000261438 PAX4O43316 350 aa13.72□□□□□ -0.21
KLF3-201ENST00000261438 IGHG4P01861 327 aa13.72□□□□□ -0.21
KLF3-201ENST00000261438 TRPT1Q86TN4 253 aaKnown RBP13.72□□□□□ -0.21
KLF3-201ENST00000261438 NOTCH4Q99466 2003 aa13.72□□□□□ -0.21
KLF3-201ENST00000261438 TMEM86BQ8N661 226 aa13.72□□□□□ -0.21
KLF3-201ENST00000261438 ZNF503Q96F45 646 aa13.72□□□□□ -0.21
KLF3-201ENST00000261438 FRMPD3Q5JV73 1810 aa13.71□□□□□ -0.21
KLF3-201ENST00000261438 ZNF672Q499Z4 452 aaPredicted RBP13.71□□□□□ -0.21
KLF3-201ENST00000261438 Q8TCH9 128 aa13.71□□□□□ -0.21
KLF3-201ENST00000261438 ADARB2-AS1A8MUL3 147 aa13.71□□□□□ -0.21
KLF3-201ENST00000261438 MSRB1Q9NZV6 116 aa13.71□□□□□ -0.21
KLF3-201ENST00000261438 NDUFA12Q9UI09 145 aa13.71□□□□□ -0.21
KLF3-201ENST00000261438 NCOA6Q14686 2063 aaPredicted RBP13.71□□□□□ -0.21
KLF3-201ENST00000261438 IGHG3P01860 377 aa13.71□□□□□ -0.22
KLF3-201ENST00000261438 THADAQ6YHU6 1953 aa13.7□□□□□ -0.22
KLF3-201ENST00000261438 ODF1Q14990 250 aa13.7□□□□□ -0.22
KLF3-201ENST00000261438 TICRRQ7Z2Z1 1910 aa13.7□□□□□ -0.22
KLF3-201ENST00000261438 CADP27708 2225 aa13.7□□□□□ -0.22
KLF3-201ENST00000261438 SPANXB1Q9NS25 103 aaPredicted RBP13.7□□□□□ -0.22
KLF3-201ENST00000261438 C19orf71A6NCJ1 209 aa13.7□□□□□ -0.22
KLF3-201ENST00000261438 PTH2Q96A98 100 aa13.7□□□□□ -0.22
KLF3-201ENST00000261438 PIMREGQ9BSJ6 248 aa13.7□□□□□ -0.22
KLF3-201ENST00000261438 MINOS1Q5TGZ0 78 aa13.69□□□□□ -0.22
KLF3-201ENST00000261438 ZNF493Q6ZR52 646 aa13.69□□□□□ -0.22
KLF3-201ENST00000261438 MINOS1-NBL1R4GNA1 71 aa13.69□□□□□ -0.22
KLF3-201ENST00000261438 ZNF106Q9H2Y7 1883 aaKnown RBP13.69□□□□□ -0.22
KLF3-201ENST00000261438 CFAP161Q6P656 301 aa13.69□□□□□ -0.22
KLF3-201ENST00000261438 SPANXCQ9NY87 97 aa13.69□□□□□ -0.22
KLF3-201ENST00000261438 MBD3L4A6NDZ8 208 aaPredicted RBP13.69□□□□□ -0.22
KLF3-201ENST00000261438 MBD3L3A6NE82 208 aaPredicted RBP13.69□□□□□ -0.22
KLF3-201ENST00000261438 MBD3L5A6NJ08 208 aaPredicted RBP13.69□□□□□ -0.22
KLF3-201ENST00000261438 Q6ZUT4 128 aa13.69□□□□□ -0.22
KLF3-201ENST00000261438 MBD3L2Q8NHZ7 208 aaPredicted RBP13.69□□□□□ -0.22
KLF3-201ENST00000261438 EML6Q6ZMW3 1958 aa13.68□□□□□ -0.22
KLF3-201ENST00000261438 C22orf46C9J442 243 aa13.68□□□□□ -0.22
KLF3-201ENST00000261438 TNRC6AQ8NDV7 1962 aaKnown RBP13.68□□□□□ -0.22
KLF3-201ENST00000261438 KLHL30-AS1Q8NEE0 82 aa13.68□□□□□ -0.22
KLF3-201ENST00000261438 CACNA1HO95180 2353 aa13.68□□□□□ -0.22
KLF3-201ENST00000261438 LOXL1Q08397 574 aaPredicted RBP13.68□□□□□ -0.22
KLF3-201ENST00000261438 DKK1O94907 266 aa13.68□□□□□ -0.22
KLF3-201ENST00000261438 TEX36Q5VZQ5 186 aa13.68□□□□□ -0.22
KLF3-201ENST00000261438 CFHR4Q92496 578 aa13.68□□□□□ -0.22
KLF3-201ENST00000261438 TRGV2A0A075B6R0 118 aa13.67□□□□□ -0.22
KLF3-201ENST00000261438 GHRHP01286 108 aa13.67□□□□□ -0.22
KLF3-201ENST00000261438 TMEM126AQ9H061 195 aa13.67□□□□□ -0.22
KLF3-201ENST00000261438 MT-ATP8P03928 68 aa13.67□□□□□ -0.22
KLF3-201ENST00000261438 DNAJC30Q96LL9 226 aa13.67□□□□□ -0.22
KLF3-201ENST00000261438 SOCS3O14543 225 aa13.67□□□□□ -0.22
KLF3-201ENST00000261438 CR1LQ2VPA4 569 aa13.67□□□□□ -0.22
KLF3-201ENST00000261438 DYNAPQ8N1N2 210 aa13.67□□□□□ -0.22
KLF3-201ENST00000261438 C1orf159Q96HA4 380 aa13.67□□□□□ -0.22
KLF3-201ENST00000261438 PLCE1Q9P212 2302 aa13.66□□□□□ -0.22
KLF3-201ENST00000261438 NBASA2RRP1 2371 aa13.66□□□□□ -0.22
KLF3-201ENST00000261438 I3L3M4 83 aa13.66□□□□□ -0.22
KLF3-201ENST00000261438 LOXP28300 417 aaPredicted RBP13.66□□□□□ -0.22
KLF3-201ENST00000261438 MBD6Q96DN6 1003 aa13.66□□□□□ -0.22
KLF3-201ENST00000261438 TRAV13-1A0A0B4J241 112 aa13.66□□□□□ -0.22
KLF3-201ENST00000261438 TMEM219Q86XT9 240 aa13.66□□□□□ -0.22
KLF3-201ENST00000261438 PRSS22Q9GZN4 317 aa13.66□□□□□ -0.22
KLF3-201ENST00000261438 E9PLD3 99 aa13.65□□□□□ -0.22
KLF3-201ENST00000261438 M0R1W7 72 aa13.65□□□□□ -0.22
KLF3-201ENST00000261438 LINC01620Q4KN68 170 aa13.65□□□□□ -0.22
KLF3-201ENST00000261438 A4D1N5 150 aa13.65□□□□□ -0.22
KLF3-201ENST00000261438 IGLV1-44P01699 117 aa13.65□□□□□ -0.22
KLF3-201ENST00000261438 HERV-K104P63124 156 aa13.65□□□□□ -0.22
KLF3-201ENST00000261438 RHPN1-AS1Q9BWJ2 59 aa13.65□□□□□ -0.22
KLF3-201ENST00000261438 LINC00310P59036 64 aa13.65□□□□□ -0.23
KLF3-201ENST00000261438 GTF3C1Q12789 2109 aa13.64□□□□□ -0.23
KLF3-201ENST00000261438 LINC00322Q6ZN03 302 aaPredicted RBP13.64□□□□□ -0.23
KLF3-201ENST00000261438 THBDP07204 575 aa13.64□□□□□ -0.23
KLF3-201ENST00000261438 ACYP1P07311 99 aa13.64□□□□□ -0.23
KLF3-201ENST00000261438 PHLDA1Q8WV24 401 aaPredicted RBP13.64□□□□□ -0.23
KLF3-201ENST00000261438 AGPAT4-IT1Q9H0P7 198 aa13.64□□□□□ -0.23
KLF3-201ENST00000261438 BRWD1-AS2P59051 145 aa13.63□□□□□ -0.23
KLF3-201ENST00000261438 C3orf56Q8N813 242 aa13.63□□□□□ -0.23
KLF3-201ENST00000261438 FAM110DQ8TAY7 271 aaPredicted RBP13.63□□□□□ -0.23
KLF3-201ENST00000261438 LAMTOR3Q9UHA4 124 aa13.63□□□□□ -0.23
KLF3-201ENST00000261438 SPTAN1Q13813 2472 aaKnown RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms