RNA–Protein interactions for RNA: ENST00000253251.12

UBE4B-201, Transcript of ubiquitination factor E4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE4B, Length 4,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-201ENST00000253251 BLCAPP62952 87 aa11.73□□□□□ -0.53
UBE4B-201ENST00000253251 GHRHP01286 108 aa11.72□□□□□ -0.53
UBE4B-201ENST00000253251 C16orf54Q6UWD8 224 aa11.72□□□□□ -0.53
UBE4B-201ENST00000253251 LINC00469Q8N7U9 141 aa11.72□□□□□ -0.53
UBE4B-201ENST00000253251 MRPL16Q9NX20 251 aaKnown RBP11.72□□□□□ -0.53
UBE4B-201ENST00000253251 MED12LQ86YW9 2145 aa11.72□□□□□ -0.53
UBE4B-201ENST00000253251 DNAL4O96015 105 aa11.72□□□□□ -0.53
UBE4B-201ENST00000253251 C22orf34Q6ZV56 151 aa11.72□□□□□ -0.53
UBE4B-201ENST00000253251 OR13C6PQ8NH95 151 aa11.72□□□□□ -0.53
UBE4B-201ENST00000253251 C18orf32Q8TCD1 76 aa11.72□□□□□ -0.53
UBE4B-201ENST00000253251 MEGF9Q9H1U4 602 aa11.72□□□□□ -0.53
UBE4B-201ENST00000253251 VGLL1Q99990 258 aa11.72□□□□□ -0.53
UBE4B-201ENST00000253251 TMEM213A2RRL7 107 aa11.72□□□□□ -0.53
UBE4B-201ENST00000253251 C19orf84I3L1E1 186 aa11.72□□□□□ -0.53
UBE4B-201ENST00000253251 C3orf79P0CE67 100 aa11.72□□□□□ -0.53
UBE4B-201ENST00000253251 GPHB5Q86YW7 130 aa11.72□□□□□ -0.53
UBE4B-201ENST00000253251 PYGO2Q9BRQ0 406 aa11.72□□□□□ -0.53
UBE4B-201ENST00000253251 PCNX3Q9H6A9 2034 aa11.71□□□□□ -0.53
UBE4B-201ENST00000253251 HSD52Q0P140 79 aa11.71□□□□□ -0.53
UBE4B-201ENST00000253251 RASL10AQ92737 203 aa11.71□□□□□ -0.53
UBE4B-201ENST00000253251 RBMY1BA6NDE4 496 aaKnown RBP11.71□□□□□ -0.53
UBE4B-201ENST00000253251 RBMY1EA6NEQ0 496 aaKnown RBP11.71□□□□□ -0.53
UBE4B-201ENST00000253251 BUB3O43684 328 aa11.71□□□□□ -0.53
UBE4B-201ENST00000253251 RBMY1DP0C7P1 496 aaKnown RBP11.71□□□□□ -0.53
UBE4B-201ENST00000253251 RBMY1A1P0DJD3 496 aaKnown RBP11.71□□□□□ -0.53
UBE4B-201ENST00000253251 RBMY1CP0DJD4 496 aa11.71□□□□□ -0.53
UBE4B-201ENST00000253251 WIPF2Q8TF74 440 aaPredicted RBP11.71□□□□□ -0.53
UBE4B-201ENST00000253251 AJUBAQ96IF1 538 aa11.71□□□□□ -0.53
UBE4B-201ENST00000253251 AGPAT4-IT1Q9H0P7 198 aa11.71□□□□□ -0.53
UBE4B-201ENST00000253251 A0A087WWL8 130 aa11.71□□□□□ -0.54
UBE4B-201ENST00000253251 ZNF815PA8K554 130 aa11.71□□□□□ -0.54
UBE4B-201ENST00000253251 DMRTA1Q5VZB9 504 aa11.71□□□□□ -0.54
UBE4B-201ENST00000253251 PATE2Q6UY27 113 aa11.71□□□□□ -0.54
UBE4B-201ENST00000253251 TMEM141Q96I45 108 aa11.71□□□□□ -0.54
UBE4B-201ENST00000253251 CACNA1AO00555 2505 aa11.71□□□□□ -0.54
UBE4B-201ENST00000253251 IGHV3-73A0A0B4J1V6 119 aa11.7□□□□□ -0.54
UBE4B-201ENST00000253251 TRAV25A0A0B4J276 109 aa11.7□□□□□ -0.54
UBE4B-201ENST00000253251 DYSFO75923 2080 aa11.7□□□□□ -0.54
UBE4B-201ENST00000253251 TMEM238C9JI98 176 aa11.7□□□□□ -0.54
UBE4B-201ENST00000253251 PROP1O75360 226 aa11.69□□□□□ -0.54
UBE4B-201ENST00000253251 Q6ZPA2 131 aa11.69□□□□□ -0.54
UBE4B-201ENST00000253251 NRGNQ92686 78 aa11.69□□□□□ -0.54
UBE4B-201ENST00000253251 EIF4EBP1Q13541 118 aaPredicted RBP11.69□□□□□ -0.54
UBE4B-201ENST00000253251 DYNAPQ8N1N2 210 aa11.69□□□□□ -0.54
UBE4B-201ENST00000253251 FAM167A-AS1Q96KT0 104 aa11.69□□□□□ -0.54
UBE4B-201ENST00000253251 C20orf78Q9BR46 151 aa11.69□□□□□ -0.54
UBE4B-201ENST00000253251 I3L3M4 83 aa11.68□□□□□ -0.54
UBE4B-201ENST00000253251 IGHV3-53P01767 116 aa11.68□□□□□ -0.54
UBE4B-201ENST00000253251 EBI3Q14213 229 aa11.68□□□□□ -0.54
UBE4B-201ENST00000253251 SMKR1H3BMG3 65 aa11.68□□□□□ -0.54
UBE4B-201ENST00000253251 SNAI2O43623 268 aa11.68□□□□□ -0.54
UBE4B-201ENST00000253251 MRPL51Q4U2R6 128 aaKnown RBP11.68□□□□□ -0.54
UBE4B-201ENST00000253251 C9orf66Q5T8R8 295 aa11.68□□□□□ -0.54
UBE4B-201ENST00000253251 TRBV6-1A0A0K0K1D8 114 aa11.68□□□□□ -0.54
UBE4B-201ENST00000253251 CD300EQ496F6 205 aaPredicted RBP11.68□□□□□ -0.54
UBE4B-201ENST00000253251 KNCNA6PVL3 124 aa11.68□□□□□ -0.54
UBE4B-201ENST00000253251 K7EMI3 77 aa11.68□□□□□ -0.54
UBE4B-201ENST00000253251 SLAQ13239 276 aa11.68□□□□□ -0.54
UBE4B-201ENST00000253251 MRPL52Q86TS9 123 aaKnown RBP11.68□□□□□ -0.54
UBE4B-201ENST00000253251 ORAOV1Q8WV07 137 aa11.68□□□□□ -0.54
UBE4B-201ENST00000253251 C17orf77Q96MU5 243 aa11.68□□□□□ -0.54
UBE4B-201ENST00000253251 AZU1P20160 251 aa11.67□□□□□ -0.54
UBE4B-201ENST00000253251 DEFB121Q5J5C9 76 aa11.67□□□□□ -0.54
UBE4B-201ENST00000253251 KLK9Q9UKQ9 250 aa11.67□□□□□ -0.54
UBE4B-201ENST00000253251 ZNF843Q8N446 348 aa11.67□□□□□ -0.54
UBE4B-201ENST00000253251 ABCA1O95477 2261 aa11.67□□□□□ -0.54
UBE4B-201ENST00000253251 MYCNOSP40205 109 aa11.67□□□□□ -0.54
UBE4B-201ENST00000253251 DAD1P61803 113 aa11.67□□□□□ -0.54
UBE4B-201ENST00000253251 A0A087X0K7 114 aa11.66□□□□□ -0.54
UBE4B-201ENST00000253251 DEFB130BP0DP73 79 aa11.66□□□□□ -0.54
UBE4B-201ENST00000253251 DEFB130AP0DP74 79 aa11.66□□□□□ -0.54
UBE4B-201ENST00000253251 TMEM95Q3KNT9 176 aa11.66□□□□□ -0.54
UBE4B-201ENST00000253251 MTURNQ8N3F0 131 aa11.66□□□□□ -0.54
UBE4B-201ENST00000253251 FANCD2OSQ96PS1 177 aa11.66□□□□□ -0.54
UBE4B-201ENST00000253251 K7EN84 100 aa11.66□□□□□ -0.54
UBE4B-201ENST00000253251 BCL6BQ8N143 479 aaPredicted RBP11.66□□□□□ -0.54
UBE4B-201ENST00000253251 KLF12Q9Y4X4 402 aa11.66□□□□□ -0.54
UBE4B-201ENST00000253251 M0R2P5 195 aa11.66□□□□□ -0.54
UBE4B-201ENST00000253251 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.65□□□□□ -0.54
UBE4B-201ENST00000253251 APOMO95445 188 aa11.65□□□□□ -0.54
UBE4B-201ENST00000253251 CFHR4Q92496 578 aa11.65□□□□□ -0.54
UBE4B-201ENST00000253251 BRWD1-AS2P59051 145 aa11.65□□□□□ -0.54
UBE4B-201ENST00000253251 PAX2Q02962 417 aa11.65□□□□□ -0.54
UBE4B-201ENST00000253251 C2orf66Q6UXQ4 117 aa11.65□□□□□ -0.54
UBE4B-201ENST00000253251 DPH3Q96FX2 82 aa11.65□□□□□ -0.54
UBE4B-201ENST00000253251 SDHAF1A6NFY7 115 aa11.64□□□□□ -0.55
UBE4B-201ENST00000253251 IGF1P05019 195 aa11.64□□□□□ -0.55
UBE4B-201ENST00000253251 SMIM2Q9BVW6 85 aa11.64□□□□□ -0.55
UBE4B-201ENST00000253251 EML6Q6ZMW3 1958 aa11.64□□□□□ -0.55
UBE4B-201ENST00000253251 SS18Q15532 418 aa11.64□□□□□ -0.55
UBE4B-201ENST00000253251 TRBV7-9A0A0J9YWB2 115 aa11.64□□□□□ -0.55
UBE4B-201ENST00000253251 LY6LH3BQJ8 138 aa11.64□□□□□ -0.55
UBE4B-201ENST00000253251 PYY3Q5JQD4 70 aa11.64□□□□□ -0.55
UBE4B-201ENST00000253251 C4orf3Q8WVX3 66 aa11.64□□□□□ -0.55
UBE4B-201ENST00000253251 SPG11Q96JI7 2443 aa11.64□□□□□ -0.55
UBE4B-201ENST00000253251 IGKV1OR2-108A0A075B7D4 117 aa11.64□□□□□ -0.55
UBE4B-201ENST00000253251 ZNF493Q6ZR52 646 aa11.64□□□□□ -0.55
UBE4B-201ENST00000253251 Q71RC1 249 aaPredicted RBP11.64□□□□□ -0.55
UBE4B-201ENST00000253251 PLA2G2EQ9NZK7 142 aa11.64□□□□□ -0.55
UBE4B-201ENST00000253251 TRBV25-1A0A075B6N4 114 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms