RNA–Protein interactions for RNA: ENST00000251739.9

VPS50-201, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS50, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-201ENST00000251739 TCL1AP56279 114 aa7.06□□□□□ -1.28
VPS50-201ENST00000251739 ERCC8Q13216 396 aa7.06□□□□□ -1.28
VPS50-201ENST00000251739 BTN1A1Q13410 526 aa7.06□□□□□ -1.28
VPS50-201ENST00000251739 PRR9Q5T870 116 aa7.06□□□□□ -1.28
VPS50-201ENST00000251739 C9orf47Q6ZRZ4 202 aa7.06□□□□□ -1.28
VPS50-201ENST00000251739 AKAP14Q86UN6 197 aa7.06□□□□□ -1.28
VPS50-201ENST00000251739 EIF4E3Q8N5X7 224 aaKnown RBP7.06□□□□□ -1.28
VPS50-201ENST00000251739 ZFAND2AQ8N6M9 145 aa7.06□□□□□ -1.28
VPS50-201ENST00000251739 FAM167A-AS1Q96KT0 104 aa7.06□□□□□ -1.28
VPS50-201ENST00000251739 C2orf50Q96LR7 162 aa7.06□□□□□ -1.28
VPS50-201ENST00000251739 LINC00477Q96M19 166 aa7.06□□□□□ -1.28
VPS50-201ENST00000251739 SEC22CQ9BRL7 303 aa7.06□□□□□ -1.28
VPS50-201ENST00000251739 NUDT15Q9NV35 164 aa7.06□□□□□ -1.28
VPS50-201ENST00000251739 PYYP10082 97 aa7.05□□□□□ -1.28
VPS50-201ENST00000251739 S100A11P31949 105 aa7.05□□□□□ -1.28
VPS50-201ENST00000251739 GCSAMLQ5JQS6 135 aa7.05□□□□□ -1.28
VPS50-201ENST00000251739 IBA57Q5T440 356 aaKnown RBP7.05□□□□□ -1.28
VPS50-201ENST00000251739 C12orf45Q8N5I9 185 aaPredicted RBP7.05□□□□□ -1.28
VPS50-201ENST00000251739 TMEM252Q8N6L7 170 aa7.05□□□□□ -1.28
VPS50-201ENST00000251739 SCRT2Q9NQ03 307 aa7.05□□□□□ -1.28
VPS50-201ENST00000251739 FUT9Q9Y231 359 aa7.05□□□□□ -1.28
VPS50-201ENST00000251739 KLF12Q9Y4X4 402 aa7.05□□□□□ -1.28
VPS50-201ENST00000251739 SRRM2Q9UQ35 2752 aaKnown RBP7.05□□□□□ -1.28
VPS50-201ENST00000251739 TRGV2A0A075B6R0 118 aa7.04□□□□□ -1.28
VPS50-201ENST00000251739 TRAV6A0A075B6T7 132 aa7.04□□□□□ -1.28
VPS50-201ENST00000251739 TRGV1A0A0A0MS02 117 aa7.04□□□□□ -1.28
VPS50-201ENST00000251739 MPDU1O75352 247 aa7.04□□□□□ -1.28
VPS50-201ENST00000251739 FGF7P21781 194 aa7.04□□□□□ -1.28
VPS50-201ENST00000251739 HBG1P69891 147 aa7.04□□□□□ -1.28
VPS50-201ENST00000251739 HBG2P69892 147 aa7.04□□□□□ -1.28
VPS50-201ENST00000251739 BAXQ07812 192 aa7.04□□□□□ -1.28
VPS50-201ENST00000251739 RAB32Q13637 225 aa7.04□□□□□ -1.28
VPS50-201ENST00000251739 Q6ZQT7 251 aa7.04□□□□□ -1.28
VPS50-201ENST00000251739 EXOC3-AS1Q8N2X6 119 aa7.04□□□□□ -1.28
VPS50-201ENST00000251739 SVIPQ8NHG7 77 aa7.04□□□□□ -1.28
VPS50-201ENST00000251739 ST6GAL2Q96JF0 529 aa7.04□□□□□ -1.28
VPS50-201ENST00000251739 VGLL1Q99990 258 aa7.04□□□□□ -1.28
VPS50-201ENST00000251739 SLC25A2Q9BXI2 301 aa7.04□□□□□ -1.28
VPS50-201ENST00000251739 NPCDR1Q9BY65 106 aa7.04□□□□□ -1.28
VPS50-201ENST00000251739 FLG2Q5D862 2391 aaPredicted RBP7.04□□□□□ -1.28
VPS50-201ENST00000251739 IGKV2-40A0A087WW87 121 aaPredicted RBP7.03□□□□□ -1.28
VPS50-201ENST00000251739 TRBV7-9A0A0J9YWB2 115 aa7.03□□□□□ -1.28
VPS50-201ENST00000251739 C5orf51A6NDU8 294 aa7.03□□□□□ -1.28
VPS50-201ENST00000251739 SIVA1O15304 175 aa7.03□□□□□ -1.28
VPS50-201ENST00000251739 GATCO43716 136 aaKnown RBP7.03□□□□□ -1.28
VPS50-201ENST00000251739 IGKV2D-40P01614 121 aaPredicted RBP7.03□□□□□ -1.28
VPS50-201ENST00000251739 PVALBP20472 110 aaPredicted RBP7.03□□□□□ -1.28
VPS50-201ENST00000251739 RNASE4P34096 147 aaKnown RBP7.03□□□□□ -1.28
VPS50-201ENST00000251739 RAB14P61106 215 aa7.03□□□□□ -1.28
VPS50-201ENST00000251739 ATP6V1FQ16864 119 aa7.03□□□□□ -1.28
VPS50-201ENST00000251739 TP53TG3Q9ULZ0 132 aa7.03□□□□□ -1.28
VPS50-201ENST00000251739 IGHV1OR15-1A0A075B7D0 117 aa7.02□□□□□ -1.29
VPS50-201ENST00000251739 C9orf118A6NHY6 69 aa7.02□□□□□ -1.29
VPS50-201ENST00000251739 NXPH4O95158 308 aa7.02□□□□□ -1.29
VPS50-201ENST00000251739 GPX1P07203 203 aa7.02□□□□□ -1.29
VPS50-201ENST00000251739 S100A10P60903 97 aa7.02□□□□□ -1.29
VPS50-201ENST00000251739 FHL2Q14192 279 aa7.02□□□□□ -1.29
VPS50-201ENST00000251739 ICAM4Q14773 271 aa7.02□□□□□ -1.29
VPS50-201ENST00000251739 SYT8Q8NBV8 401 aa7.02□□□□□ -1.29
VPS50-201ENST00000251739 MRPL16Q9NX20 251 aaKnown RBP7.02□□□□□ -1.29
VPS50-201ENST00000251739 ZNF492Q9P255 531 aa7.02□□□□□ -1.29
VPS50-201ENST00000251739 PRO0255Q9UI72 69 aa7.02□□□□□ -1.29
VPS50-201ENST00000251739 TIMM9Q9Y5J7 89 aa7.02□□□□□ -1.29
VPS50-201ENST00000251739 ICOSQ9Y6W8 199 aa7.02□□□□□ -1.29
VPS50-201ENST00000251739 CRYBA4P53673 196 aa7.01□□□□□ -1.29
VPS50-201ENST00000251739 TMEM78Q5T7P6 136 aa7.01□□□□□ -1.29
VPS50-201ENST00000251739 MIR17HGQ75NE6 70 aa7.01□□□□□ -1.29
VPS50-201ENST00000251739 BLNKQ8WV28 456 aa7.01□□□□□ -1.29
VPS50-201ENST00000251739 FXYD5Q96DB9 178 aa7.01□□□□□ -1.29
VPS50-201ENST00000251739 PHYHIPLQ96FC7 376 aa7.01□□□□□ -1.29
VPS50-201ENST00000251739 AAMDCQ9H7C9 122 aa7.01□□□□□ -1.29
VPS50-201ENST00000251739 GPN1Q9HCN4 374 aaPredicted RBP7.01□□□□□ -1.29
VPS50-201ENST00000251739 DNAH8Q96JB1 4490 aa7.01□□□□□ -1.29
VPS50-201ENST00000251739 SNAPINO95295 136 aa7□□□□□ -1.29
VPS50-201ENST00000251739 NBEAP1P0C6P0 100 aa7□□□□□ -1.29
VPS50-201ENST00000251739 ZNF138P52744 262 aa7□□□□□ -1.29
VPS50-201ENST00000251739 XGP55808 180 aa7□□□□□ -1.29
VPS50-201ENST00000251739 NHLH2Q02577 135 aa7□□□□□ -1.29
VPS50-201ENST00000251739 SLAQ13239 276 aa7□□□□□ -1.29
VPS50-201ENST00000251739 LYPD5Q6UWN5 251 aa7□□□□□ -1.29
VPS50-201ENST00000251739 OR5C1Q8NGR4 320 aa7□□□□□ -1.29
VPS50-201ENST00000251739 Q8TAT8 98 aa7□□□□□ -1.29
VPS50-201ENST00000251739 THAP6Q8TBB0 222 aa7□□□□□ -1.29
VPS50-201ENST00000251739 CCDC32Q9BV29 185 aa7□□□□□ -1.29
VPS50-201ENST00000251739 MRPL32Q9BYC8 188 aaKnown RBP7□□□□□ -1.29
VPS50-201ENST00000251739 CBY1Q9Y3M2 126 aa7□□□□□ -1.29
VPS50-201ENST00000251739 RBAKDNA6NC62 111 aa6.99□□□□□ -1.29
VPS50-201ENST00000251739 H0YIZ8 118 aa6.99□□□□□ -1.29
VPS50-201ENST00000251739 IGHV3-53P01767 116 aa6.99□□□□□ -1.29
VPS50-201ENST00000251739 ERVFC1-1P60608 527 aa6.99□□□□□ -1.29
VPS50-201ENST00000251739 ZNF415Q09FC8 603 aa6.99□□□□□ -1.29
VPS50-201ENST00000251739 ZNF266Q14584 549 aa6.99□□□□□ -1.29
VPS50-201ENST00000251739 MRPL23Q16540 153 aaKnown RBP6.99□□□□□ -1.29
VPS50-201ENST00000251739 Q6AWC8 147 aa6.99□□□□□ -1.29
VPS50-201ENST00000251739 NUDT10Q8NFP7 164 aa6.99□□□□□ -1.29
VPS50-201ENST00000251739 NUDT11Q96G61 164 aa6.99□□□□□ -1.29
VPS50-201ENST00000251739 C8orf49Q96NF6 230 aa6.99□□□□□ -1.29
VPS50-201ENST00000251739 KRTAP9-9Q9BYP9 154 aa6.99□□□□□ -1.29
VPS50-201ENST00000251739 KRTAP9-4Q9BYQ2 154 aa6.99□□□□□ -1.29
VPS50-201ENST00000251739 OR51M1Q9H341 326 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 256.1 ms