RNA–Protein interactions for RNA: ENST00000245908.10

SH2D3A-201, Transcript of SH2 domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH2D3A, Length 2,296 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-201ENST00000245908 ATP6V0BQ99437 205 aa16.63■□□□□ 0.25
SH2D3A-201ENST00000245908 AGPAT4-IT1Q9H0P7 198 aa16.63■□□□□ 0.25
SH2D3A-201ENST00000245908 IGHV3OR16-13A0A075B7E8 117 aa16.62■□□□□ 0.25
SH2D3A-201ENST00000245908 IGHV3-74A0A0B4J1X5 117 aa16.62■□□□□ 0.25
SH2D3A-201ENST00000245908 C19orf84I3L1E1 186 aa16.62■□□□□ 0.25
SH2D3A-201ENST00000245908 ATP5G2Q06055 141 aa16.62■□□□□ 0.25
SH2D3A-201ENST00000245908 MOB4Q9Y3A3 225 aa16.62■□□□□ 0.25
SH2D3A-201ENST00000245908 FGF6P10767 208 aa16.62■□□□□ 0.25
SH2D3A-201ENST00000245908 C19orf54Q5BKX5 351 aa16.62■□□□□ 0.25
SH2D3A-201ENST00000245908 LINC01546A6NGU7 62 aa16.61■□□□□ 0.25
SH2D3A-201ENST00000245908 FXYD7P58549 80 aa16.61■□□□□ 0.25
SH2D3A-201ENST00000245908 FOXE3Q13461 319 aa16.61■□□□□ 0.25
SH2D3A-201ENST00000245908 PRSS57Q6UWY2 283 aa16.61■□□□□ 0.25
SH2D3A-201ENST00000245908 C8orf86Q6ZUL3 223 aa16.61■□□□□ 0.25
SH2D3A-201ENST00000245908 HIF1ANQ9NWT6 349 aa16.61■□□□□ 0.25
SH2D3A-201ENST00000245908 MAP1LC3AQ9H492 121 aa16.61■□□□□ 0.25
SH2D3A-201ENST00000245908 IGKV3D-20A0A0C4DH25 116 aa16.6■□□□□ 0.25
SH2D3A-201ENST00000245908 ZNF207O43670 478 aaKnown RBP16.6■□□□□ 0.25
SH2D3A-201ENST00000245908 SMIM17P0DL12 118 aa16.6■□□□□ 0.25
SH2D3A-201ENST00000245908 CRIP2P52943 208 aaPredicted RBP16.6■□□□□ 0.25
SH2D3A-201ENST00000245908 TMEM219Q86XT9 240 aa16.6■□□□□ 0.25
SH2D3A-201ENST00000245908 OR5A1Q8NGJ0 315 aa16.6■□□□□ 0.25
SH2D3A-201ENST00000245908 IFI27L1Q96BM0 104 aa16.6■□□□□ 0.25
SH2D3A-201ENST00000245908 IGHV3-49A0A0A0MS15 119 aa16.59■□□□□ 0.25
SH2D3A-201ENST00000245908 TRAV41A0A0B4J266 112 aa16.59■□□□□ 0.25
SH2D3A-201ENST00000245908 CACNG7P62955 275 aa16.59■□□□□ 0.25
SH2D3A-201ENST00000245908 TMEM78Q5T7P6 136 aa16.59■□□□□ 0.25
SH2D3A-201ENST00000245908 OR1N2Q8NGR9 330 aa16.59■□□□□ 0.25
SH2D3A-201ENST00000245908 C11orf21Q9P2W6 132 aa16.59■□□□□ 0.25
SH2D3A-201ENST00000245908 FAM223BA6NKX1 122 aa16.59■□□□□ 0.25
SH2D3A-201ENST00000245908 IGHV4-39P01824 125 aa16.59■□□□□ 0.25
SH2D3A-201ENST00000245908 FAM223AQ8IWN6 122 aa16.59■□□□□ 0.25
SH2D3A-201ENST00000245908 OR2K2Q8NGT1 345 aa16.59■□□□□ 0.25
SH2D3A-201ENST00000245908 NDUFS8O00217 210 aa16.58■□□□□ 0.25
SH2D3A-201ENST00000245908 UQCRFS1P47985 274 aa16.58■□□□□ 0.25
SH2D3A-201ENST00000245908 C9orf47Q6ZRZ4 202 aa16.58■□□□□ 0.25
SH2D3A-201ENST00000245908 A0A0G2JLM5 398 aa16.58■□□□□ 0.24
SH2D3A-201ENST00000245908 H3BUT2 72 aa16.58■□□□□ 0.24
SH2D3A-201ENST00000245908 PPIFP30405 207 aaKnown RBP16.58■□□□□ 0.24
SH2D3A-201ENST00000245908 HSD52Q0P140 79 aa16.58■□□□□ 0.24
SH2D3A-201ENST00000245908 PRORYQ9H606 182 aa16.58■□□□□ 0.24
SH2D3A-201ENST00000245908 PIFOQ8TCI5 191 aa16.57■□□□□ 0.24
SH2D3A-201ENST00000245908 ASH1LQ9NR48 2969 aaKnown RBP16.57■□□□□ 0.24
SH2D3A-201ENST00000245908 GAS8-AS1O95177 125 aa16.57■□□□□ 0.24
SH2D3A-201ENST00000245908 TNFRSF6BO95407 300 aa16.57■□□□□ 0.24
SH2D3A-201ENST00000245908 KIR3DS1Q14943 382 aa16.57■□□□□ 0.24
SH2D3A-201ENST00000245908 IGHV1-69DA0A0B4J2H0 117 aa16.56■□□□□ 0.24
SH2D3A-201ENST00000245908 SNAI2O43623 268 aa16.56■□□□□ 0.24
SH2D3A-201ENST00000245908 IGHV1-69P01742 117 aa16.56■□□□□ 0.24
SH2D3A-201ENST00000245908 BOD1L2Q8IYS8 172 aa16.56■□□□□ 0.24
SH2D3A-201ENST00000245908 OR9G4Q8NGQ1 327 aa16.56■□□□□ 0.24
SH2D3A-201ENST00000245908 NXT2Q9NPJ8 142 aaKnown RBP16.56■□□□□ 0.24
SH2D3A-201ENST00000245908 IGHV3OR16-10A0A075B7F0 116 aa16.56■□□□□ 0.24
SH2D3A-201ENST00000245908 SIVA1O15304 175 aa16.56■□□□□ 0.24
SH2D3A-201ENST00000245908 GLMPQ8WWB7 406 aa16.56■□□□□ 0.24
SH2D3A-201ENST00000245908 SCGB1A1P11684 91 aa16.54■□□□□ 0.24
SH2D3A-201ENST00000245908 GNLYP22749 145 aa16.54■□□□□ 0.24
SH2D3A-201ENST00000245908 IGHV7-4-1A0A0J9YVY3 117 aa16.54■□□□□ 0.24
SH2D3A-201ENST00000245908 TRGV3P03979 118 aa16.54■□□□□ 0.24
SH2D3A-201ENST00000245908 SAMD13Q5VXD3 122 aa16.54■□□□□ 0.24
SH2D3A-201ENST00000245908 LINC00527Q9UJ94 153 aa16.54■□□□□ 0.24
SH2D3A-201ENST00000245908 A0A1W2PPM0 123 aa16.53■□□□□ 0.24
SH2D3A-201ENST00000245908 FCER1GP30273 86 aa16.53■□□□□ 0.24
SH2D3A-201ENST00000245908 C9orf139Q6ZV77 190 aa16.53■□□□□ 0.24
SH2D3A-201ENST00000245908 OR4X2Q8NGF9 303 aa16.53■□□□□ 0.24
SH2D3A-201ENST00000245908 SVIPQ8NHG7 77 aa16.53■□□□□ 0.24
SH2D3A-201ENST00000245908 ABCA2Q9BZC7 2435 aa16.53■□□□□ 0.24
SH2D3A-201ENST00000245908 CACNA1BQ00975 2339 aa16.53■□□□□ 0.24
SH2D3A-201ENST00000245908 ARL3P36405 182 aa16.53■□□□□ 0.24
SH2D3A-201ENST00000245908 C16orf92Q96LL3 132 aa16.53■□□□□ 0.24
SH2D3A-201ENST00000245908 SVEP1Q4LDE5 3571 aa16.52■□□□□ 0.24
SH2D3A-201ENST00000245908 A1L4Q6 167 aa16.52■□□□□ 0.24
SH2D3A-201ENST00000245908 SMAD7O15105 426 aaKnown RBP16.52■□□□□ 0.24
SH2D3A-201ENST00000245908 EVI2AP22794 236 aa16.52■□□□□ 0.24
SH2D3A-201ENST00000245908 BRD3OSQ6XYD6 125 aa16.52■□□□□ 0.24
SH2D3A-201ENST00000245908 TRAV40A0A0B4J280 105 aa16.52■□□□□ 0.23
SH2D3A-201ENST00000245908 GATA1P15976 413 aaPredicted RBP16.52■□□□□ 0.23
SH2D3A-201ENST00000245908 LEPP41159 167 aa16.52■□□□□ 0.23
SH2D3A-201ENST00000245908 SPCS1Q9Y6A9 102 aa16.52■□□□□ 0.23
SH2D3A-201ENST00000245908 ADAMTSL5Q6ZMM2 481 aa16.51■□□□□ 0.23
SH2D3A-201ENST00000245908 LENEPQ9Y5L5 61 aa16.51■□□□□ 0.23
SH2D3A-201ENST00000245908 IGHV4-4A0A075B6R2 117 aa16.5■□□□□ 0.23
SH2D3A-201ENST00000245908 IGHV4-61A0A0C4DH41 118 aa16.5■□□□□ 0.23
SH2D3A-201ENST00000245908 IGF1P05019 195 aa16.5■□□□□ 0.23
SH2D3A-201ENST00000245908 Q8N8P6 123 aa16.5■□□□□ 0.23
SH2D3A-201ENST00000245908 PIMREGQ9BSJ6 248 aa16.5■□□□□ 0.23
SH2D3A-201ENST00000245908 IGLV2-18A0A075B6J9 118 aa16.5■□□□□ 0.23
SH2D3A-201ENST00000245908 WFDC3Q8IUB2 231 aa16.5■□□□□ 0.23
SH2D3A-201ENST00000245908 C20orf173Q96LM9 149 aa16.5■□□□□ 0.23
SH2D3A-201ENST00000245908 DKK2Q9UBU2 259 aa16.5■□□□□ 0.23
SH2D3A-201ENST00000245908 SPTBN4Q9H254 2564 aa16.49■□□□□ 0.23
SH2D3A-201ENST00000245908 C18orf15Q96N68 181 aa16.49■□□□□ 0.23
SH2D3A-201ENST00000245908 NDUFA4O00483 81 aa16.49■□□□□ 0.23
SH2D3A-201ENST00000245908 BRI3O95415 125 aa16.49■□□□□ 0.23
SH2D3A-201ENST00000245908 PRSS47A8MTI9 375 aa16.48■□□□□ 0.23
SH2D3A-201ENST00000245908 UNQ9165/PRO28630Q6UXU0 137 aa16.48■□□□□ 0.23
SH2D3A-201ENST00000245908 Q6ZQT7 251 aa16.48■□□□□ 0.23
SH2D3A-201ENST00000245908 GPHB5Q86YW7 130 aa16.48■□□□□ 0.23
SH2D3A-201ENST00000245908 NAA38Q9BRA0 125 aaKnown RBP16.48■□□□□ 0.23
SH2D3A-201ENST00000245908 TRBV12-3P01733 135 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms