RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 ZSWIM8A7E2V4 1837 aa15□□□□□ -0.01
SMPD3-201ENST00000219334 KIAA1671Q9BY89 1806 aa15□□□□□ -0.01
SMPD3-201ENST00000219334 IGKV1-39P01597 117 aa15□□□□□ -0.01
SMPD3-201ENST00000219334 IGKV1D-39P04432 117 aa15□□□□□ -0.01
SMPD3-201ENST00000219334 ZGRF1Q86YA3 2104 aa15□□□□□ -0.01
SMPD3-201ENST00000219334 FOXE3Q13461 319 aa14.99□□□□□ -0.01
SMPD3-201ENST00000219334 LHBP01229 141 aa14.99□□□□□ -0.01
SMPD3-201ENST00000219334 NXPH4O95158 308 aa14.99□□□□□ -0.01
SMPD3-201ENST00000219334 SRSF2Q01130 221 aaKnown RBP14.99□□□□□ -0.01
SMPD3-201ENST00000219334 OR11H6Q8NGC7 330 aa14.99□□□□□ -0.01
SMPD3-201ENST00000219334 RLFQ13129 1914 aa14.99□□□□□ -0.01
SMPD3-201ENST00000219334 DEFB136Q30KP8 78 aa14.99□□□□□ -0.01
SMPD3-201ENST00000219334 NAA38Q9BRA0 125 aaKnown RBP14.98□□□□□ -0.01
SMPD3-201ENST00000219334 PRSS29PA6NIE9 313 aa14.98□□□□□ -0.01
SMPD3-201ENST00000219334 MRPL53Q96EL3 112 aaKnown RBP14.98□□□□□ -0.01
SMPD3-201ENST00000219334 NOP10Q9NPE3 64 aaKnown RBP14.98□□□□□ -0.01
SMPD3-201ENST00000219334 A0A087X0K7 114 aa14.97□□□□□ -0.01
SMPD3-201ENST00000219334 A0A0J9YY99 117 aa14.97□□□□□ -0.01
SMPD3-201ENST00000219334 IGHV4-38-2P0DP08 117 aa14.97□□□□□ -0.01
SMPD3-201ENST00000219334 GP9P14770 177 aa14.97□□□□□ -0.01
SMPD3-201ENST00000219334 POU2AF1Q16633 256 aa14.97□□□□□ -0.01
SMPD3-201ENST00000219334 PIFOQ8TCI5 191 aa14.97□□□□□ -0.01
SMPD3-201ENST00000219334 IGKV2D-24A0A075B6R9 120 aa14.97□□□□□ -0.01
SMPD3-201ENST00000219334 C10orf105Q8TEF2 133 aa14.97□□□□□ -0.01
SMPD3-201ENST00000219334 IGHV1-24A0A0C4DH33 117 aa14.96□□□□□ -0.01
SMPD3-201ENST00000219334 SIP14410 1827 aa14.96□□□□□ -0.01
SMPD3-201ENST00000219334 ZNF491Q8N8L2 437 aa14.96□□□□□ -0.01
SMPD3-201ENST00000219334 VOPP1Q96AW1 172 aa14.96□□□□□ -0.01
SMPD3-201ENST00000219334 IGKV1OR2-108A0A075B7D4 117 aa14.96□□□□□ -0.01
SMPD3-201ENST00000219334 GAGE2EQ4V326 116 aa14.96□□□□□ -0.01
SMPD3-201ENST00000219334 PYGO2Q9BRQ0 406 aa14.96□□□□□ -0.01
SMPD3-201ENST00000219334 GAGE2DQ9UEU5 116 aa14.96□□□□□ -0.01
SMPD3-201ENST00000219334 ADORA2A-AS1P86434 159 aa14.95□□□□□ -0.02
SMPD3-201ENST00000219334 ACACBO00763 2458 aa14.95□□□□□ -0.02
SMPD3-201ENST00000219334 TRAV26-2A0A0B4J265 109 aa14.95□□□□□ -0.02
SMPD3-201ENST00000219334 PCP4P48539 62 aa14.95□□□□□ -0.02
SMPD3-201ENST00000219334 DAZAP2Q15038 168 aaPredicted RBP14.95□□□□□ -0.02
SMPD3-201ENST00000219334 MRPL51Q4U2R6 128 aaKnown RBP14.95□□□□□ -0.02
SMPD3-201ENST00000219334 ZNF48Q96MX3 618 aaPredicted RBP14.95□□□□□ -0.02
SMPD3-201ENST00000219334 TEX48A0A1B0GUV7 120 aa14.94□□□□□ -0.02
SMPD3-201ENST00000219334 PRSS57Q6UWY2 283 aa14.94□□□□□ -0.02
SMPD3-201ENST00000219334 CYYR1Q96J86 154 aa14.94□□□□□ -0.02
SMPD3-201ENST00000219334 DKK4Q9UBT3 224 aa14.93□□□□□ -0.02
SMPD3-201ENST00000219334 U3KQE9 123 aa14.93□□□□□ -0.02
SMPD3-201ENST00000219334 SLURP1P55000 103 aa14.93□□□□□ -0.02
SMPD3-201ENST00000219334 NRGNQ92686 78 aa14.93□□□□□ -0.02
SMPD3-201ENST00000219334 UBE2BP63146 152 aa14.93□□□□□ -0.02
SMPD3-201ENST00000219334 STPG4Q8N801 248 aa14.93□□□□□ -0.02
SMPD3-201ENST00000219334 CLPSL2Q6UWE3 100 aa14.92□□□□□ -0.02
SMPD3-201ENST00000219334 FAM231DQ6ZW35 169 aa14.92□□□□□ -0.02
SMPD3-201ENST00000219334 F6UB75 175 aa14.92□□□□□ -0.02
SMPD3-201ENST00000219334 H3BMM0 161 aa14.92□□□□□ -0.02
SMPD3-201ENST00000219334 WDR81Q562E7 1941 aa14.92□□□□□ -0.02
SMPD3-201ENST00000219334 MPV17L2Q567V2 206 aa14.92□□□□□ -0.02
SMPD3-201ENST00000219334 HERVK_113P63121 156 aa14.92□□□□□ -0.02
SMPD3-201ENST00000219334 GAGE2BQ13066 116 aa14.92□□□□□ -0.02
SMPD3-201ENST00000219334 C11orf53Q8IXP5 236 aa14.92□□□□□ -0.02
SMPD3-201ENST00000219334 ANAPC13Q9BS18 74 aa14.92□□□□□ -0.02
SMPD3-201ENST00000219334 IGLC7A0M8Q6 106 aa14.91□□□□□ -0.02
SMPD3-201ENST00000219334 IGLV3-1P01715 115 aa14.91□□□□□ -0.02
SMPD3-201ENST00000219334 Q0VG73 95 aa14.91□□□□□ -0.02
SMPD3-201ENST00000219334 GAGE2AQ6NT46 116 aa14.91□□□□□ -0.02
SMPD3-201ENST00000219334 Q9HAA7 133 aa14.91□□□□□ -0.02
SMPD3-201ENST00000219334 IGLV2-23P01705 113 aa14.91□□□□□ -0.02
SMPD3-201ENST00000219334 SIGMAR1Q99720 223 aa14.91□□□□□ -0.02
SMPD3-201ENST00000219334 NDUFA12Q9UI09 145 aa14.91□□□□□ -0.02
SMPD3-201ENST00000219334 C18orf32Q8TCD1 76 aa14.91□□□□□ -0.02
SMPD3-201ENST00000219334 FXYD5Q96DB9 178 aa14.91□□□□□ -0.02
SMPD3-201ENST00000219334 PKIGQ9Y2B9 76 aa14.91□□□□□ -0.02
SMPD3-201ENST00000219334 CCL18P55774 89 aa14.9□□□□□ -0.02
SMPD3-201ENST00000219334 BLCAPP62952 87 aa14.9□□□□□ -0.02
SMPD3-201ENST00000219334 KIR3DS1Q14943 382 aa14.9□□□□□ -0.02
SMPD3-201ENST00000219334 OCIAD2Q56VL3 154 aa14.9□□□□□ -0.02
SMPD3-201ENST00000219334 SMIM2Q9BVW6 85 aa14.9□□□□□ -0.02
SMPD3-201ENST00000219334 SPART-AS1P0CW21 52 aa14.9□□□□□ -0.02
SMPD3-201ENST00000219334 ZC2HC1AQ96GY0 325 aa14.9□□□□□ -0.02
SMPD3-201ENST00000219334 C1orf43Q9BWL3 253 aa14.9□□□□□ -0.02
SMPD3-201ENST00000219334 SHANK1Q9Y566 2161 aa14.9□□□□□ -0.02
SMPD3-201ENST00000219334 DOCK9Q9BZ29 2069 aa14.9□□□□□ -0.02
SMPD3-201ENST00000219334 A8MWP6 167 aa14.9□□□□□ -0.02
SMPD3-201ENST00000219334 TAL2Q16559 108 aa14.9□□□□□ -0.02
SMPD3-201ENST00000219334 RBMY1FQ15415 496 aaKnown RBP14.89□□□□□ -0.03
SMPD3-201ENST00000219334 APRG1Q8IVJ8 170 aa14.89□□□□□ -0.03
SMPD3-201ENST00000219334 UBE2WQ96B02 151 aa14.89□□□□□ -0.03
SMPD3-201ENST00000219334 SCRT2Q9NQ03 307 aa14.89□□□□□ -0.03
SMPD3-201ENST00000219334 PTPRDP23468 1912 aa14.89□□□□□ -0.03
SMPD3-201ENST00000219334 C9JAW5 83 aa14.88□□□□□ -0.03
SMPD3-201ENST00000219334 LENEPQ9Y5L5 61 aa14.88□□□□□ -0.03
SMPD3-201ENST00000219334 SOCS3O14543 225 aa14.88□□□□□ -0.03
SMPD3-201ENST00000219334 SUMO4Q6EEV6 95 aa14.88□□□□□ -0.03
SMPD3-201ENST00000219334 IGHV7-81A0A0B4J1V7 117 aa14.88□□□□□ -0.03
SMPD3-201ENST00000219334 ATP5G1P05496 136 aa14.88□□□□□ -0.03
SMPD3-201ENST00000219334 C20orf78Q9BR46 151 aa14.88□□□□□ -0.03
SMPD3-201ENST00000219334 LOC105371267A0A1B0GV96 52 aa14.87□□□□□ -0.03
SMPD3-201ENST00000219334 WIPF2Q8TF74 440 aaPredicted RBP14.87□□□□□ -0.03
SMPD3-201ENST00000219334 AJUBAQ96IF1 538 aa14.87□□□□□ -0.03
SMPD3-201ENST00000219334 AGPAT4-IT1Q9H0P7 198 aa14.87□□□□□ -0.03
SMPD3-201ENST00000219334 TRAV25A0A0B4J276 109 aa14.87□□□□□ -0.03
SMPD3-201ENST00000219334 NPBQ8NG41 125 aa14.87□□□□□ -0.03
SMPD3-201ENST00000219334 MRPL23Q16540 153 aaKnown RBP14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms