RNA–Protein interactions for RNA: ENST00000003084.10

CFTR-201, Transcript of cystic fibrosis transmembrane conductance regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CFTR, Length 6,132 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFTR-201ENST00000003084 MEGF9Q9H1U4 602 aa3.32□□□□□ -1.88
CFTR-201ENST00000003084 RALGAPA1Q6GYQ0 2036 aa3.32□□□□□ -1.88
CFTR-201ENST00000003084 HSD52Q0P140 79 aa3.32□□□□□ -1.88
CFTR-201ENST00000003084 Q6YL49 198 aa3.32□□□□□ -1.88
CFTR-201ENST00000003084 ZNF493Q6ZR52 646 aa3.32□□□□□ -1.88
CFTR-201ENST00000003084 C20orf144Q9BQM9 153 aa3.32□□□□□ -1.88
CFTR-201ENST00000003084 C20orf78Q9BR46 151 aa3.32□□□□□ -1.88
CFTR-201ENST00000003084 TIMM21Q9BVV7 248 aa3.32□□□□□ -1.88
CFTR-201ENST00000003084 WI2-2373I1.2A0A1W2PRP0 233 aa3.31□□□□□ -1.88
CFTR-201ENST00000003084 TEX22C9J3V5 150 aa3.31□□□□□ -1.88
CFTR-201ENST00000003084 F8WEM9 126 aa3.31□□□□□ -1.88
CFTR-201ENST00000003084 RIPPLY3P57055 190 aa3.31□□□□□ -1.88
CFTR-201ENST00000003084 C5orf30Q96GV9 206 aa3.31□□□□□ -1.88
CFTR-201ENST00000003084 LINC00574Q9H8X3 128 aa3.31□□□□□ -1.88
CFTR-201ENST00000003084 RETNQ9HD89 108 aa3.31□□□□□ -1.88
CFTR-201ENST00000003084 ZNF318Q5VUA4 2279 aa3.31□□□□□ -1.88
CFTR-201ENST00000003084 TRAV8-1A0A0A6YYK1 113 aa3.31□□□□□ -1.88
CFTR-201ENST00000003084 DNAJC9-AS1A6NH13 148 aa3.31□□□□□ -1.88
CFTR-201ENST00000003084 K7EMI3 77 aa3.31□□□□□ -1.88
CFTR-201ENST00000003084 C11orf52Q96A22 123 aa3.31□□□□□ -1.88
CFTR-201ENST00000003084 C1orf159Q96HA4 380 aa3.31□□□□□ -1.88
CFTR-201ENST00000003084 CST9LQ9H4G1 147 aa3.31□□□□□ -1.88
CFTR-201ENST00000003084 JPT2Q9H910 190 aa3.31□□□□□ -1.88
CFTR-201ENST00000003084 KLK5Q9Y337 293 aaPredicted RBP3.31□□□□□ -1.88
CFTR-201ENST00000003084 PLXND1Q9Y4D7 1925 aa3.31□□□□□ -1.88
CFTR-201ENST00000003084 COL4A3Q01955 1670 aa3.31□□□□□ -1.88
CFTR-201ENST00000003084 C19orf84I3L1E1 186 aa3.31□□□□□ -1.88
CFTR-201ENST00000003084 PAX2Q02962 417 aa3.31□□□□□ -1.88
CFTR-201ENST00000003084 WIPF2Q8TF74 440 aaPredicted RBP3.31□□□□□ -1.88
CFTR-201ENST00000003084 ICOSQ9Y6W8 199 aa3.31□□□□□ -1.88
CFTR-201ENST00000003084 CEP350Q5VT06 3117 aa3.31□□□□□ -1.88
CFTR-201ENST00000003084 UBE2CO00762 179 aa3.31□□□□□ -1.88
CFTR-201ENST00000003084 SPART-AS1P0CW21 52 aa3.31□□□□□ -1.88
CFTR-201ENST00000003084 CFHR3Q02985 330 aa3.31□□□□□ -1.88
CFTR-201ENST00000003084 NEGR1Q7Z3B1 354 aa3.31□□□□□ -1.88
CFTR-201ENST00000003084 NUP210LQ5VU65 1888 aa3.31□□□□□ -1.88
CFTR-201ENST00000003084 IGHV4OR15-8A0A075B7B6 117 aa3.31□□□□□ -1.88
CFTR-201ENST00000003084 A0A087WW49 117 aa3.31□□□□□ -1.88
CFTR-201ENST00000003084 GGTLC3B5MD39 225 aa3.31□□□□□ -1.88
CFTR-201ENST00000003084 HIST1H2BKO60814 126 aa3.31□□□□□ -1.88
CFTR-201ENST00000003084 IGLV1-47P01700 117 aa3.31□□□□□ -1.88
CFTR-201ENST00000003084 HIST1H2BJP06899 126 aa3.31□□□□□ -1.88
CFTR-201ENST00000003084 PLA2G2AP14555 144 aa3.31□□□□□ -1.88
CFTR-201ENST00000003084 EDN2P20800 178 aa3.31□□□□□ -1.88
CFTR-201ENST00000003084 HIST1H2BOP23527 126 aa3.31□□□□□ -1.88
CFTR-201ENST00000003084 HIST1H2BBP33778 126 aa3.31□□□□□ -1.88
CFTR-201ENST00000003084 HIST1H2BDP58876 126 aa3.31□□□□□ -1.88
CFTR-201ENST00000003084 HIST1H2BCP62807 126 aa3.31□□□□□ -1.88
CFTR-201ENST00000003084 Q0VG73 95 aa3.31□□□□□ -1.88
CFTR-201ENST00000003084 HIST2H2BEQ16778 126 aa3.31□□□□□ -1.88
CFTR-201ENST00000003084 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.31□□□□□ -1.88
CFTR-201ENST00000003084 AMN1Q8IY45 258 aa3.31□□□□□ -1.88
CFTR-201ENST00000003084 NRGNQ92686 78 aa3.31□□□□□ -1.88
CFTR-201ENST00000003084 HIST1H2BHQ93079 126 aa3.31□□□□□ -1.88
CFTR-201ENST00000003084 HIST1H2BNQ99877 126 aa3.31□□□□□ -1.88
CFTR-201ENST00000003084 HIST1H2BMQ99879 126 aa3.31□□□□□ -1.88
CFTR-201ENST00000003084 ANAPC13Q9BS18 74 aa3.31□□□□□ -1.88
CFTR-201ENST00000003084 DENND4AQ7Z401 1863 aa3.31□□□□□ -1.88
CFTR-201ENST00000003084 NOTCH4Q99466 2003 aa3.3□□□□□ -1.88
CFTR-201ENST00000003084 A0A087X0K7 114 aa3.3□□□□□ -1.88
CFTR-201ENST00000003084 WIPF3A6NGB9 483 aa3.3□□□□□ -1.88
CFTR-201ENST00000003084 CDK2AP2O75956 126 aa3.3□□□□□ -1.88
CFTR-201ENST00000003084 CXCL1P09341 107 aa3.3□□□□□ -1.88
CFTR-201ENST00000003084 CTAG1AP78358 180 aa3.3□□□□□ -1.88
CFTR-201ENST00000003084 SSBP2P81877 361 aaPredicted RBP3.3□□□□□ -1.88
CFTR-201ENST00000003084 ATXN8Q156A1 80 aa3.3□□□□□ -1.88
CFTR-201ENST00000003084 C11orf71Q6IPW1 123 aa3.3□□□□□ -1.88
CFTR-201ENST00000003084 ORAOV1Q8WV07 137 aa3.3□□□□□ -1.88
CFTR-201ENST00000003084 ERG28Q9UKR5 140 aa3.3□□□□□ -1.88
CFTR-201ENST00000003084 DENND4CQ5VZ89 1909 aa3.3□□□□□ -1.88
CFTR-201ENST00000003084 TRAV12-2A0A075B6T6 113 aa3.3□□□□□ -1.88
CFTR-201ENST00000003084 PMVKQ15126 192 aa3.3□□□□□ -1.88
CFTR-201ENST00000003084 BCL6BQ8N143 479 aaPredicted RBP3.3□□□□□ -1.88
CFTR-201ENST00000003084 ZNRF2Q8NHG8 242 aa3.3□□□□□ -1.88
CFTR-201ENST00000003084 C11orf68Q9H3H3 251 aaKnown RBP3.3□□□□□ -1.88
CFTR-201ENST00000003084 NINQ8N4C6 2090 aa3.3□□□□□ -1.88
CFTR-201ENST00000003084 C2orf70A6NJV1 201 aa3.3□□□□□ -1.88
CFTR-201ENST00000003084 K7EIM0 57 aa3.3□□□□□ -1.88
CFTR-201ENST00000003084 ZNF726P1Q15940 193 aa3.3□□□□□ -1.88
CFTR-201ENST00000003084 SFTA2Q6UW10 78 aa3.3□□□□□ -1.88
CFTR-201ENST00000003084 C14orf144Q96I85 54 aa3.3□□□□□ -1.88
CFTR-201ENST00000003084 TP53TG1Q9Y2A0 90 aa3.3□□□□□ -1.88
CFTR-201ENST00000003084 TRAV13-1A0A0B4J241 112 aa3.3□□□□□ -1.88
CFTR-201ENST00000003084 COLCA2A8K830 154 aa3.3□□□□□ -1.88
CFTR-201ENST00000003084 MED14OSP0DP75 135 aa3.3□□□□□ -1.88
CFTR-201ENST00000003084 LMO4P61968 165 aa3.3□□□□□ -1.88
CFTR-201ENST00000003084 HERVK_113P63121 156 aa3.3□□□□□ -1.88
CFTR-201ENST00000003084 LGALS9O00182 355 aa3.3□□□□□ -1.88
CFTR-201ENST00000003084 ATP5G1P05496 136 aa3.3□□□□□ -1.88
CFTR-201ENST00000003084 BOD1L2Q8IYS8 172 aa3.3□□□□□ -1.88
CFTR-201ENST00000003084 ZC2HC1AQ96GY0 325 aa3.3□□□□□ -1.88
CFTR-201ENST00000003084 RITA1Q96K30 269 aa3.3□□□□□ -1.88
CFTR-201ENST00000003084 NOP10Q9NPE3 64 aaKnown RBP3.3□□□□□ -1.88
CFTR-201ENST00000003084 DOCK8Q8NF50 2099 aa3.29□□□□□ -1.88
CFTR-201ENST00000003084 ARHGEF17Q96PE2 2063 aaPredicted RBP3.29□□□□□ -1.88
CFTR-201ENST00000003084 A4D1N5 150 aa3.29□□□□□ -1.88
CFTR-201ENST00000003084 K7EQD1 137 aa3.29□□□□□ -1.88
CFTR-201ENST00000003084 BLCAPP62952 87 aa3.29□□□□□ -1.88
CFTR-201ENST00000003084 MRPL23Q16540 153 aaKnown RBP3.29□□□□□ -1.88
CFTR-201ENST00000003084 MORN5Q5VZ52 161 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms