RNA–Protein interactions for RNA: ENST00000642137.1

LINC00339-213, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 222 nt, Biotype transcribed processed pseudogene, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-213ENST00000642137 ERCC8Q13216 396 aa9.07□□□□□ -0.96
LINC00339-213ENST00000642137 PEA15Q15121 130 aa9.07□□□□□ -0.96
LINC00339-213ENST00000642137 TOR2AQ5JU69 321 aa9.07□□□□□ -0.96
LINC00339-213ENST00000642137 TMEM78Q5T7P6 136 aa9.07□□□□□ -0.96
LINC00339-213ENST00000642137 TMEM75Q8N9X5 138 aa9.07□□□□□ -0.96
LINC00339-213ENST00000642137 C11orf52Q96A22 123 aa9.07□□□□□ -0.96
LINC00339-213ENST00000642137 ODF3Q96PU9 254 aa9.07□□□□□ -0.96
LINC00339-213ENST00000642137 ZNF492Q9P255 531 aa9.07□□□□□ -0.96
LINC00339-213ENST00000642137 KLF12Q9Y4X4 402 aa9.07□□□□□ -0.96
LINC00339-213ENST00000642137 TRBV7-9A0A0J9YWB2 115 aa9.06□□□□□ -0.96
LINC00339-213ENST00000642137 CT45A10P0DMU9 189 aa9.06□□□□□ -0.96
LINC00339-213ENST00000642137 ZNF138P52744 262 aa9.06□□□□□ -0.96
LINC00339-213ENST00000642137 NUTF2P61970 127 aaKnown RBP9.06□□□□□ -0.96
LINC00339-213ENST00000642137 TMEM183BQ1AE95 376 aa9.06□□□□□ -0.96
LINC00339-213ENST00000642137 MORN3Q6PF18 240 aaPredicted RBP9.06□□□□□ -0.96
LINC00339-213ENST00000642137 AMTNQ6UX39 209 aa9.06□□□□□ -0.96
LINC00339-213ENST00000642137 C2CD4CQ8TF44 421 aa9.06□□□□□ -0.96
LINC00339-213ENST00000642137 PSG8Q9UQ74 426 aa9.06□□□□□ -0.96
LINC00339-213ENST00000642137 LENEPQ9Y5L5 61 aa9.06□□□□□ -0.96
LINC00339-213ENST00000642137 KIR2DL5BA0A0G2JN68 375 aa9.05□□□□□ -0.96
LINC00339-213ENST00000642137 KIR2DL5BA0A0G2JPC4 375 aa9.05□□□□□ -0.96
LINC00339-213ENST00000642137 TRBV6-1A0A0K0K1D8 114 aa9.05□□□□□ -0.96
LINC00339-213ENST00000642137 SCO2A0A1W2PP80 73 aa9.05□□□□□ -0.96
LINC00339-213ENST00000642137 LINC00862A6NCI5 91 aa9.05□□□□□ -0.96
LINC00339-213ENST00000642137 TMEM250H0YL14 139 aa9.05□□□□□ -0.96
LINC00339-213ENST00000642137 IGKV3-20P01619 116 aa9.05□□□□□ -0.96
LINC00339-213ENST00000642137 IGLV2-11P01706 119 aa9.05□□□□□ -0.96
LINC00339-213ENST00000642137 SRP19P09132 144 aaKnown RBP9.05□□□□□ -0.96
LINC00339-213ENST00000642137 RPL35AP18077 110 aaKnown RBP9.05□□□□□ -0.96
LINC00339-213ENST00000642137 AKR1C3P42330 323 aa9.05□□□□□ -0.96
LINC00339-213ENST00000642137 TAS2R60P59551 318 aa9.05□□□□□ -0.96
LINC00339-213ENST00000642137 FLI1Q01543 452 aaPredicted RBP9.05□□□□□ -0.96
LINC00339-213ENST00000642137 DEFB121Q5J5C9 76 aa9.05□□□□□ -0.96
LINC00339-213ENST00000642137 KIR2DL5AQ8N109 375 aa9.05□□□□□ -0.96
LINC00339-213ENST00000642137 KIR2DL5BQ8NHK3 375 aa9.05□□□□□ -0.96
LINC00339-213ENST00000642137 FMC1Q96HJ9 113 aa9.05□□□□□ -0.96
LINC00339-213ENST00000642137 FAM19A4Q96LR4 140 aa9.05□□□□□ -0.96
LINC00339-213ENST00000642137 LINC00479Q96M42 142 aa9.05□□□□□ -0.96
LINC00339-213ENST00000642137 CSTL1Q9H114 145 aa9.05□□□□□ -0.96
LINC00339-213ENST00000642137 MGAM2Q2M2H8 2515 aa9.04□□□□□ -0.96
LINC00339-213ENST00000642137 TRAV8-1A0A0A6YYK1 113 aa9.04□□□□□ -0.96
LINC00339-213ENST00000642137 TRAV34A0A0B4J273 112 aa9.04□□□□□ -0.96
LINC00339-213ENST00000642137 AMBPP02760 352 aa9.04□□□□□ -0.96
LINC00339-213ENST00000642137 TSPOP30536 169 aa9.04□□□□□ -0.96
LINC00339-213ENST00000642137 APOC4P55056 127 aa9.04□□□□□ -0.96
LINC00339-213ENST00000642137 UBE2G1P62253 170 aa9.04□□□□□ -0.96
LINC00339-213ENST00000642137 SAPCD1Q5SSQ6 148 aa9.04□□□□□ -0.96
LINC00339-213ENST00000642137 SGK494Q96LW2 274 aa9.04□□□□□ -0.96
LINC00339-213ENST00000642137 ZFP30Q9Y2G7 519 aa9.04□□□□□ -0.96
LINC00339-213ENST00000642137 DNAH3Q8TD57 4116 aa9.03□□□□□ -0.96
LINC00339-213ENST00000642137 UBE2CO00762 179 aa9.03□□□□□ -0.96
LINC00339-213ENST00000642137 FRMD6-AS1P0C7T7 363 aa9.03□□□□□ -0.96
LINC00339-213ENST00000642137 CRISP2P16562 243 aa9.03□□□□□ -0.96
LINC00339-213ENST00000642137 LEPP41159 167 aa9.03□□□□□ -0.96
LINC00339-213ENST00000642137 CDKN1BP46527 198 aa9.03□□□□□ -0.96
LINC00339-213ENST00000642137 SRSF3P84103 164 aaKnown RBP9.03□□□□□ -0.96
LINC00339-213ENST00000642137 DEFA6Q01524 100 aa9.03□□□□□ -0.96
LINC00339-213ENST00000642137 PRNTQ86SH4 94 aa9.03□□□□□ -0.96
LINC00339-213ENST00000642137 MRAPQ8TCY5 172 aa9.03□□□□□ -0.96
LINC00339-213ENST00000642137 C1QTNF4Q9BXJ3 329 aa9.03□□□□□ -0.96
LINC00339-213ENST00000642137 SLC35B3Q9H1N7 401 aa9.03□□□□□ -0.96
LINC00339-213ENST00000642137 GIG44P09565 113 aaPredicted RBP9.02□□□□□ -0.97
LINC00339-213ENST00000642137 RPL35P42766 123 aaKnown RBP9.02□□□□□ -0.97
LINC00339-213ENST00000642137 UQCC3Q6UW78 93 aa9.02□□□□□ -0.97
LINC00339-213ENST00000642137 EIF4E3Q8N5X7 224 aaKnown RBP9.02□□□□□ -0.97
LINC00339-213ENST00000642137 TVP23CQ96ET8 276 aa9.02□□□□□ -0.97
LINC00339-213ENST00000642137 NDFIP1Q9BT67 221 aa9.02□□□□□ -0.97
LINC00339-213ENST00000642137 KLLNB2CW77 178 aa9.01□□□□□ -0.97
LINC00339-213ENST00000642137 C9JQL5 133 aa9.01□□□□□ -0.97
LINC00339-213ENST00000642137 CRXO43186 299 aaPredicted RBP9.01□□□□□ -0.97
LINC00339-213ENST00000642137 LTAP01374 205 aa9.01□□□□□ -0.97
LINC00339-213ENST00000642137 GPX1P07203 203 aa9.01□□□□□ -0.97
LINC00339-213ENST00000642137 FXYD7P58549 80 aa9.01□□□□□ -0.97
LINC00339-213ENST00000642137 SPINK13Q1W4C9 94 aa9.01□□□□□ -0.97
LINC00339-213ENST00000642137 COX8CQ7Z4L0 72 aa9.01□□□□□ -0.97
LINC00339-213ENST00000642137 BAGE2Q86Y30 109 aa9.01□□□□□ -0.97
LINC00339-213ENST00000642137 ZFAND2AQ8N6M9 145 aa9.01□□□□□ -0.97
LINC00339-213ENST00000642137 Q8TAT8 98 aa9.01□□□□□ -0.97
LINC00339-213ENST00000642137 TREM1Q9NP99 234 aa9.01□□□□□ -0.97
LINC00339-213ENST00000642137 M0R2Z0 102 aa9□□□□□ -0.97
LINC00339-213ENST00000642137 CA1P00915 261 aaPredicted RBP9□□□□□ -0.97
LINC00339-213ENST00000642137 Q86TA4 180 aa9□□□□□ -0.97
LINC00339-213ENST00000642137 COMMD7Q86VX2 200 aa9□□□□□ -0.97
LINC00339-213ENST00000642137 TMEM183AQ8IXX5 376 aa9□□□□□ -0.97
LINC00339-213ENST00000642137 IGF2BP2-AS1Q96M15 143 aa9□□□□□ -0.97
LINC00339-213ENST00000642137 C20orf144Q9BQM9 153 aa9□□□□□ -0.97
LINC00339-213ENST00000642137 DERL1Q9BUN8 251 aa9□□□□□ -0.97
LINC00339-213ENST00000642137 PARLQ9H300 379 aa9□□□□□ -0.97
LINC00339-213ENST00000642137 XCL2Q9UBD3 114 aa9□□□□□ -0.97
LINC00339-213ENST00000642137 C9JCJ5 164 aa8.99□□□□□ -0.97
LINC00339-213ENST00000642137 FAM74A3Q4VXF1 159 aa8.99□□□□□ -0.97
LINC00339-213ENST00000642137 SMUG1Q53HV7 270 aa8.99□□□□□ -0.97
LINC00339-213ENST00000642137 Q6ZWC4 215 aa8.99□□□□□ -0.97
LINC00339-213ENST00000642137 CSNK1G2-AS1Q8NCQ2 148 aa8.99□□□□□ -0.97
LINC00339-213ENST00000642137 SMIM12Q96EX1 92 aa8.99□□□□□ -0.97
LINC00339-213ENST00000642137 C8orf49Q96NF6 230 aa8.99□□□□□ -0.97
LINC00339-213ENST00000642137 ASCL2Q99929 193 aa8.99□□□□□ -0.97
LINC00339-213ENST00000642137 MLST8Q9BVC4 326 aa8.99□□□□□ -0.97
LINC00339-213ENST00000642137 TRAV12-2A0A075B6T6 113 aa8.98□□□□□ -0.97
LINC00339-213ENST00000642137 C7orf71A4D174 169 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms