RNA–Protein interactions for RNA: ENST00000641491.1

PHGDH-218, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 986 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-218ENST00000641491 COMMD7Q86VX2 200 aa9.62□□□□□ -0.87
PHGDH-218ENST00000641491 AURKAIP1Q9NWT8 199 aaPredicted RBP9.62□□□□□ -0.87
PHGDH-218ENST00000641491 NBEAL2Q6ZNJ1 2754 aa9.62□□□□□ -0.87
PHGDH-218ENST00000641491 RAB19A4D1S5 217 aa9.61□□□□□ -0.87
PHGDH-218ENST00000641491 TMEM250H0YL14 139 aa9.61□□□□□ -0.87
PHGDH-218ENST00000641491 H3BMM0 161 aa9.61□□□□□ -0.87
PHGDH-218ENST00000641491 ZNF705DP0CH99 300 aaPredicted RBP9.61□□□□□ -0.87
PHGDH-218ENST00000641491 ZNF705BP0CI00 300 aaPredicted RBP9.61□□□□□ -0.87
PHGDH-218ENST00000641491 FLI1Q01543 452 aaPredicted RBP9.61□□□□□ -0.87
PHGDH-218ENST00000641491 ZNF124Q15973 351 aa9.61□□□□□ -0.87
PHGDH-218ENST00000641491 SAPCD1Q5SSQ6 148 aa9.61□□□□□ -0.87
PHGDH-218ENST00000641491 MRAPQ8TCY5 172 aa9.61□□□□□ -0.87
PHGDH-218ENST00000641491 RARRES2Q99969 163 aa9.61□□□□□ -0.87
PHGDH-218ENST00000641491 TMEM208Q9BTX3 173 aa9.61□□□□□ -0.87
PHGDH-218ENST00000641491 CMYA5Q8N3K9 4069 aa9.61□□□□□ -0.87
PHGDH-218ENST00000641491 PRAC2D3DTV9 90 aa9.6□□□□□ -0.87
PHGDH-218ENST00000641491 NPIPB6E9PJ23 425 aa9.6□□□□□ -0.87
PHGDH-218ENST00000641491 CA1P00915 261 aaPredicted RBP9.6□□□□□ -0.87
PHGDH-218ENST00000641491 INSP01308 110 aa9.6□□□□□ -0.87
PHGDH-218ENST00000641491 PRB2P02812 416 aaPredicted RBP9.6□□□□□ -0.87
PHGDH-218ENST00000641491 PRB4P10163 310 aaPredicted RBP9.6□□□□□ -0.87
PHGDH-218ENST00000641491 GNG4P50150 75 aa9.6□□□□□ -0.87
PHGDH-218ENST00000641491 ERCC8Q13216 396 aa9.6□□□□□ -0.87
PHGDH-218ENST00000641491 C9orf47Q6ZRZ4 202 aa9.6□□□□□ -0.87
PHGDH-218ENST00000641491 PSG8Q9UQ74 426 aa9.6□□□□□ -0.87
PHGDH-218ENST00000641491 J3KRW8 73 aa9.59□□□□□ -0.87
PHGDH-218ENST00000641491 GPX1P07203 203 aa9.59□□□□□ -0.87
PHGDH-218ENST00000641491 CDKN1BP46527 198 aa9.59□□□□□ -0.87
PHGDH-218ENST00000641491 DEFB1P60022 68 aa9.59□□□□□ -0.87
PHGDH-218ENST00000641491 GDF5OSQ5U4N7 250 aa9.59□□□□□ -0.87
PHGDH-218ENST00000641491 UQCC3Q6UW78 93 aa9.59□□□□□ -0.87
PHGDH-218ENST00000641491 TRPT1Q86TN4 253 aaKnown RBP9.59□□□□□ -0.87
PHGDH-218ENST00000641491 SGK494Q96LW2 274 aa9.59□□□□□ -0.87
PHGDH-218ENST00000641491 ODF3Q96PU9 254 aa9.59□□□□□ -0.87
PHGDH-218ENST00000641491 VGLL1Q99990 258 aa9.59□□□□□ -0.87
PHGDH-218ENST00000641491 NIPSNAP3BQ9BS92 247 aa9.59□□□□□ -0.87
PHGDH-218ENST00000641491 CSTL1Q9H114 145 aa9.59□□□□□ -0.87
PHGDH-218ENST00000641491 SLC35B3Q9H1N7 401 aa9.59□□□□□ -0.87
PHGDH-218ENST00000641491 BIN3Q9NQY0 253 aa9.59□□□□□ -0.87
PHGDH-218ENST00000641491 LENEPQ9Y5L5 61 aa9.59□□□□□ -0.87
PHGDH-218ENST00000641491 TRAV34A0A0B4J273 112 aa9.58□□□□□ -0.88
PHGDH-218ENST00000641491 UBE2CO00762 179 aa9.58□□□□□ -0.88
PHGDH-218ENST00000641491 NDUFS6O75380 124 aaKnown RBP9.58□□□□□ -0.88
PHGDH-218ENST00000641491 RPL35P42766 123 aaKnown RBP9.58□□□□□ -0.88
PHGDH-218ENST00000641491 FXYD7P58549 80 aa9.58□□□□□ -0.88
PHGDH-218ENST00000641491 TAS2R60P59551 318 aa9.58□□□□□ -0.88
PHGDH-218ENST00000641491 NDUFA5Q16718 116 aa9.58□□□□□ -0.88
PHGDH-218ENST00000641491 TMEM183BQ1AE95 376 aa9.58□□□□□ -0.88
PHGDH-218ENST00000641491 SMUG1Q53HV7 270 aa9.58□□□□□ -0.88
PHGDH-218ENST00000641491 Q86TA4 180 aa9.58□□□□□ -0.88
PHGDH-218ENST00000641491 BAGE2Q86Y30 109 aa9.58□□□□□ -0.88
PHGDH-218ENST00000641491 CCDC28AQ8IWP9 274 aa9.58□□□□□ -0.88
PHGDH-218ENST00000641491 Q8TAT8 98 aa9.58□□□□□ -0.88
PHGDH-218ENST00000641491 C11orf52Q96A22 123 aa9.58□□□□□ -0.88
PHGDH-218ENST00000641491 SMIM7Q9BQ49 75 aa9.58□□□□□ -0.88
PHGDH-218ENST00000641491 C19orf73Q9NVV2 129 aa9.58□□□□□ -0.88
PHGDH-218ENST00000641491 ZNF492Q9P255 531 aa9.58□□□□□ -0.88
PHGDH-218ENST00000641491 ZFP30Q9Y2G7 519 aa9.58□□□□□ -0.88
PHGDH-218ENST00000641491 GOLT1BQ9Y3E0 138 aa9.58□□□□□ -0.88
PHGDH-218ENST00000641491 NOTCH3Q9UM47 2321 aa9.57□□□□□ -0.88
PHGDH-218ENST00000641491 TRAV8-1A0A0A6YYK1 113 aa9.57□□□□□ -0.88
PHGDH-218ENST00000641491 KIR2DL5BA0A0G2JN68 375 aa9.57□□□□□ -0.88
PHGDH-218ENST00000641491 KIR2DL5BA0A0G2JPC4 375 aa9.57□□□□□ -0.88
PHGDH-218ENST00000641491 TRBV7-9A0A0J9YWB2 115 aa9.57□□□□□ -0.88
PHGDH-218ENST00000641491 ZNF727A8MUV8 499 aa9.57□□□□□ -0.88
PHGDH-218ENST00000641491 MGST1P10620 155 aaKnown RBP9.57□□□□□ -0.88
PHGDH-218ENST00000641491 SPINK13Q1W4C9 94 aa9.57□□□□□ -0.88
PHGDH-218ENST00000641491 FAM74A3Q4VXF1 159 aa9.57□□□□□ -0.88
PHGDH-218ENST00000641491 SOHLH1Q5JUK2 328 aa9.57□□□□□ -0.88
PHGDH-218ENST00000641491 KIR2DL5AQ8N109 375 aa9.57□□□□□ -0.88
PHGDH-218ENST00000641491 Q8N1Y9 231 aa9.57□□□□□ -0.88
PHGDH-218ENST00000641491 KIR2DL5BQ8NHK3 375 aa9.57□□□□□ -0.88
PHGDH-218ENST00000641491 DAZAP1Q96EP5 407 aaKnown RBP9.57□□□□□ -0.88
PHGDH-218ENST00000641491 CLUHP3Q96NS8 147 aa9.57□□□□□ -0.88
PHGDH-218ENST00000641491 AGPAT4-IT1Q9H0P7 198 aa9.57□□□□□ -0.88
PHGDH-218ENST00000641491 M0R2Z0 102 aa9.56□□□□□ -0.88
PHGDH-218ENST00000641491 FRMD6-AS1P0C7T7 363 aa9.56□□□□□ -0.88
PHGDH-218ENST00000641491 CENPWQ5EE01 88 aa9.56□□□□□ -0.88
PHGDH-218ENST00000641491 PARLQ9H300 379 aa9.56□□□□□ -0.88
PHGDH-218ENST00000641491 XCL2Q9UBD3 114 aa9.56□□□□□ -0.88
PHGDH-218ENST00000641491 KMT2CQ8NEZ4 4911 aaKnown RBP9.55□□□□□ -0.88
PHGDH-218ENST00000641491 IGHV3OR16-12A0A075B7B8 117 aa9.55□□□□□ -0.88
PHGDH-218ENST00000641491 A8MZ25 164 aa9.55□□□□□ -0.88
PHGDH-218ENST00000641491 SFTA3P0C7M3 94 aa9.55□□□□□ -0.88
PHGDH-218ENST00000641491 RNASE4P34096 147 aaKnown RBP9.55□□□□□ -0.88
PHGDH-218ENST00000641491 C2CD4CQ8TF44 421 aa9.55□□□□□ -0.88
PHGDH-218ENST00000641491 LINC00479Q96M42 142 aa9.55□□□□□ -0.88
PHGDH-218ENST00000641491 RCHY1Q96PM5 261 aa9.55□□□□□ -0.88
PHGDH-218ENST00000641491 ZMAT4Q9H898 229 aa9.55□□□□□ -0.88
PHGDH-218ENST00000641491 TRAV12-2A0A075B6T6 113 aa9.54□□□□□ -0.88
PHGDH-218ENST00000641491 TRAV21A0A0B4J279 112 aa9.54□□□□□ -0.88
PHGDH-218ENST00000641491 TRBV6-1A0A0K0K1D8 114 aa9.54□□□□□ -0.88
PHGDH-218ENST00000641491 C7orf71A4D174 169 aa9.54□□□□□ -0.88
PHGDH-218ENST00000641491 LINC00862A6NCI5 91 aa9.54□□□□□ -0.88
PHGDH-218ENST00000641491 K7EIL1 84 aa9.54□□□□□ -0.88
PHGDH-218ENST00000641491 SRP19P09132 144 aaKnown RBP9.54□□□□□ -0.88
PHGDH-218ENST00000641491 PRR27Q6MZM9 219 aa9.54□□□□□ -0.88
PHGDH-218ENST00000641491 TMEM256Q8N2U0 113 aa9.54□□□□□ -0.88
PHGDH-218ENST00000641491 SMIM12Q96EX1 92 aa9.54□□□□□ -0.88
PHGDH-218ENST00000641491 IGF2BP2-AS1Q96M15 143 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms