RNA–Protein interactions for RNA: ENST00000641023.1

PHGDH-208, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,096 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-208ENST00000641023 FAM162BQ5T6X4 162 aa13.16□□□□□ -0.3
PHGDH-208ENST00000641023 TMEM136Q6ZRR5 245 aa13.16□□□□□ -0.3
PHGDH-208ENST00000641023 Q8TAT8 98 aa13.16□□□□□ -0.3
PHGDH-208ENST00000641023 GTSF1Q8WW33 167 aa13.16□□□□□ -0.3
PHGDH-208ENST00000641023 COA6Q5JTJ3 125 aaKnown RBP13.15□□□□□ -0.3
PHGDH-208ENST00000641023 RBPMS2Q6ZRY4 209 aaKnown RBP13.15□□□□□ -0.3
PHGDH-208ENST00000641023 S100A2P29034 98 aa13.14□□□□□ -0.31
PHGDH-208ENST00000641023 TMEM78Q5T7P6 136 aa13.14□□□□□ -0.31
PHGDH-208ENST00000641023 FOXA3P55318 350 aaPredicted RBP13.14□□□□□ -0.31
PHGDH-208ENST00000641023 ERCC8Q13216 396 aa13.14□□□□□ -0.31
PHGDH-208ENST00000641023 GFI1BQ5VTD9 330 aa13.14□□□□□ -0.31
PHGDH-208ENST00000641023 HIST3H2BBQ8N257 126 aa13.14□□□□□ -0.31
PHGDH-208ENST00000641023 FASNP49327 2511 aaKnown RBP13.14□□□□□ -0.31
PHGDH-208ENST00000641023 HECTD1Q9ULT8 2610 aa13.13□□□□□ -0.31
PHGDH-208ENST00000641023 Q6ZSV7 163 aa13.13□□□□□ -0.31
PHGDH-208ENST00000641023 PGLYRP4Q96LB8 373 aa13.13□□□□□ -0.31
PHGDH-208ENST00000641023 GPR61Q9BZJ8 451 aa13.13□□□□□ -0.31
PHGDH-208ENST00000641023 IGHV4OR15-8A0A075B7B6 117 aa13.12□□□□□ -0.31
PHGDH-208ENST00000641023 A0A087WW49 117 aa13.12□□□□□ -0.31
PHGDH-208ENST00000641023 LGALS9O00182 355 aa13.12□□□□□ -0.31
PHGDH-208ENST00000641023 SOCS3O14543 225 aa13.12□□□□□ -0.31
PHGDH-208ENST00000641023 PDZD11Q5EBL8 140 aa13.12□□□□□ -0.31
PHGDH-208ENST00000641023 C9orf47Q6ZRZ4 202 aa13.12□□□□□ -0.31
PHGDH-208ENST00000641023 REC114Q7Z4M0 266 aa13.12□□□□□ -0.31
PHGDH-208ENST00000641023 LINC00518Q8N0U6 118 aa13.12□□□□□ -0.31
PHGDH-208ENST00000641023 AGPAT4-IT1Q9H0P7 198 aa13.12□□□□□ -0.31
PHGDH-208ENST00000641023 TMEM160Q9NX00 188 aa13.12□□□□□ -0.31
PHGDH-208ENST00000641023 ACANP16112 2415 aa13.12□□□□□ -0.31
PHGDH-208ENST00000641023 A8MWP6 167 aa13.12□□□□□ -0.31
PHGDH-208ENST00000641023 SH2D1AO60880 128 aa13.12□□□□□ -0.31
PHGDH-208ENST00000641023 GZMBP10144 247 aa13.12□□□□□ -0.31
PHGDH-208ENST00000641023 CAMPP49913 170 aa13.12□□□□□ -0.31
PHGDH-208ENST00000641023 ZNF138P52744 262 aa13.12□□□□□ -0.31
PHGDH-208ENST00000641023 HBBP68871 147 aa13.12□□□□□ -0.31
PHGDH-208ENST00000641023 ZNF738Q8NE65 137 aa13.12□□□□□ -0.31
PHGDH-208ENST00000641023 ESM1Q9NQ30 184 aa13.12□□□□□ -0.31
PHGDH-208ENST00000641023 MYO9AB2RTY4 2548 aa13.12□□□□□ -0.31
PHGDH-208ENST00000641023 TMEM213A2RRL7 107 aa13.11□□□□□ -0.31
PHGDH-208ENST00000641023 TMEM189A5PLL7 270 aa13.11□□□□□ -0.31
PHGDH-208ENST00000641023 HOXD3P31249 432 aaPredicted RBP13.11□□□□□ -0.31
PHGDH-208ENST00000641023 SAMD13Q5VXD3 122 aa13.11□□□□□ -0.31
PHGDH-208ENST00000641023 Q6AWC8 147 aa13.11□□□□□ -0.31
PHGDH-208ENST00000641023 PPP1R14DQ9NXH3 145 aa13.11□□□□□ -0.31
PHGDH-208ENST00000641023 IGKV3-7A0A075B6H7 116 aa13.11□□□□□ -0.31
PHGDH-208ENST00000641023 A0A1B0GXF2 115 aa13.11□□□□□ -0.31
PHGDH-208ENST00000641023 IFITM10A6NMD0 228 aa13.11□□□□□ -0.31
PHGDH-208ENST00000641023 APCSP02743 223 aa13.11□□□□□ -0.31
PHGDH-208ENST00000641023 CRISP2P16562 243 aa13.11□□□□□ -0.31
PHGDH-208ENST00000641023 SYNJ2BPP57105 145 aa13.11□□□□□ -0.31
PHGDH-208ENST00000641023 AKAP9Q99996 3911 aa13.1□□□□□ -0.31
PHGDH-208ENST00000641023 FABP5P3A8MUU1 101 aa13.1□□□□□ -0.31
PHGDH-208ENST00000641023 OVOL1O14753 267 aa13.1□□□□□ -0.31
PHGDH-208ENST00000641023 C20orf173Q96LM9 149 aa13.1□□□□□ -0.31
PHGDH-208ENST00000641023 GRIFINA4D1Z8 144 aa13.09□□□□□ -0.31
PHGDH-208ENST00000641023 EDN2P20800 178 aa13.09□□□□□ -0.31
PHGDH-208ENST00000641023 ID1P41134 155 aa13.09□□□□□ -0.31
PHGDH-208ENST00000641023 ZNF80P51504 273 aaPredicted RBP13.09□□□□□ -0.31
PHGDH-208ENST00000641023 OR10J6PQ8NGY7 276 aa13.09□□□□□ -0.31
PHGDH-208ENST00000641023 LINC00477Q96M19 166 aa13.09□□□□□ -0.31
PHGDH-208ENST00000641023 FABP4P15090 132 aa13.08□□□□□ -0.32
PHGDH-208ENST00000641023 SRD5A1P18405 259 aa13.08□□□□□ -0.32
PHGDH-208ENST00000641023 RPS20P60866 119 aaKnown RBP13.08□□□□□ -0.32
PHGDH-208ENST00000641023 ZNF418Q8TF45 676 aaPredicted RBP13.08□□□□□ -0.32
PHGDH-208ENST00000641023 C4orf3Q8WVX3 66 aa13.08□□□□□ -0.32
PHGDH-208ENST00000641023 LENEPQ9Y5L5 61 aa13.08□□□□□ -0.32
PHGDH-208ENST00000641023 A0A1B0GUT8 65 aa13.08□□□□□ -0.32
PHGDH-208ENST00000641023 HAX1O00165 279 aa13.08□□□□□ -0.32
PHGDH-208ENST00000641023 RNASE1P07998 156 aaKnown RBP13.08□□□□□ -0.32
PHGDH-208ENST00000641023 SRSF2Q01130 221 aaKnown RBP13.08□□□□□ -0.32
PHGDH-208ENST00000641023 SLAQ13239 276 aa13.08□□□□□ -0.32
PHGDH-208ENST00000641023 KIAA1644Q3SXP7 199 aa13.08□□□□□ -0.32
PHGDH-208ENST00000641023 KHDC1LQ5JSQ8 128 aa13.08□□□□□ -0.32
PHGDH-208ENST00000641023 GDF5OSQ5U4N7 250 aa13.08□□□□□ -0.32
PHGDH-208ENST00000641023 BORCS7Q96B45 105 aa13.08□□□□□ -0.32
PHGDH-208ENST00000641023 LINC01619G3V211 115 aa13.07□□□□□ -0.32
PHGDH-208ENST00000641023 KLF5Q13887 457 aaPredicted RBP13.07□□□□□ -0.32
PHGDH-208ENST00000641023 TCTEX1D4Q5JR98 221 aa13.07□□□□□ -0.32
PHGDH-208ENST00000641023 OR11H1Q8NG94 326 aa13.07□□□□□ -0.32
PHGDH-208ENST00000641023 DPF1Q92782 380 aa13.07□□□□□ -0.32
PHGDH-208ENST00000641023 C12orf57Q99622 126 aa13.07□□□□□ -0.32
PHGDH-208ENST00000641023 HIST1H2BLQ99880 126 aa13.07□□□□□ -0.32
PHGDH-208ENST00000641023 TMSB15BA0A087X1C1 80 aa13.06□□□□□ -0.32
PHGDH-208ENST00000641023 M0QZ24 198 aa13.06□□□□□ -0.32
PHGDH-208ENST00000641023 ORM1P02763 201 aa13.06□□□□□ -0.32
PHGDH-208ENST00000641023 SMIM6P0DI80 62 aa13.06□□□□□ -0.32
PHGDH-208ENST00000641023 Q0VG73 95 aa13.06□□□□□ -0.32
PHGDH-208ENST00000641023 RIGQ13278 110 aa13.06□□□□□ -0.32
PHGDH-208ENST00000641023 DCANP1Q8TF63 244 aa13.06□□□□□ -0.32
PHGDH-208ENST00000641023 TPPP3Q9BW30 176 aa13.06□□□□□ -0.32
PHGDH-208ENST00000641023 OR10J3Q5JRS4 329 aa13.06□□□□□ -0.32
PHGDH-208ENST00000641023 C18orf65Q6ZTR6 163 aa13.06□□□□□ -0.32
PHGDH-208ENST00000641023 OR10D4PQ8NGN7 298 aa13.06□□□□□ -0.32
PHGDH-208ENST00000641023 WFDC12Q8WWY7 111 aa13.06□□□□□ -0.32
PHGDH-208ENST00000641023 SSBP4Q9BWG4 385 aaPredicted RBP13.06□□□□□ -0.32
PHGDH-208ENST00000641023 SELENOKQ9Y6D0 94 aa13.06□□□□□ -0.32
PHGDH-208ENST00000641023 A0A1B0GW15 77 aa13.05□□□□□ -0.32
PHGDH-208ENST00000641023 ZNF705DP0CH99 300 aaPredicted RBP13.05□□□□□ -0.32
PHGDH-208ENST00000641023 ZNF705BP0CI00 300 aaPredicted RBP13.05□□□□□ -0.32
PHGDH-208ENST00000641023 SRIP30626 198 aa13.05□□□□□ -0.32
PHGDH-208ENST00000641023 DEFB136Q30KP8 78 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms