RNA–Protein interactions for RNA: ENST00000640027.1

MED17-222, Transcript of mediator complex subunit 17, human

TSL 5

Gene MED17, Length 4,569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MED17-222	ENST00000640027	TRAV8-4	A0A0B4J246	113 aa		11.19	□□□□□ -0.62
MED17-222	ENST00000640027	ITGB1BP1	O14713	200 aa		11.19	□□□□□ -0.62
MED17-222	ENST00000640027	ZNF48	Q96MX3	618 aa	Predicted RBP	11.19	□□□□□ -0.62
MED17-222	ENST00000640027	TMEM126A	Q9H061	195 aa		11.19	□□□□□ -0.62
MED17-222	ENST00000640027	SETD2	Q9BYW2	2564 aa	Predicted RBP	11.19	□□□□□ -0.62
MED17-222	ENST00000640027	VOPP1	Q96AW1	172 aa		11.19	□□□□□ -0.62
MED17-222	ENST00000640027	C1orf122	Q6ZSJ8	110 aa		11.18	□□□□□ -0.62
MED17-222	ENST00000640027	IL17REL	Q6ZVW7	336 aa		11.18	□□□□□ -0.62
MED17-222	ENST00000640027	IGHV2-70D	A0A0C4DH43	119 aa		11.18	□□□□□ -0.62
MED17-222	ENST00000640027	CXCL1	P09341	107 aa		11.18	□□□□□ -0.62
MED17-222	ENST00000640027	CFHR2	P36980	270 aa		11.18	□□□□□ -0.62
MED17-222	ENST00000640027	TRPT1	Q86TN4	253 aa	Known RBP	11.18	□□□□□ -0.62
MED17-222	ENST00000640027	HS3ST6	Q96QI5	342 aa		11.18	□□□□□ -0.62
MED17-222	ENST00000640027	BPTF	Q12830	3046 aa		11.18	□□□□□ -0.62
MED17-222	ENST00000640027	DNAJC30	Q96LL9	226 aa		11.18	□□□□□ -0.62
MED17-222	ENST00000640027		Q6ZS49	121 aa		11.17	□□□□□ -0.62
MED17-222	ENST00000640027	TRBV25-1	A0A075B6N4	114 aa		11.17	□□□□□ -0.62
MED17-222	ENST00000640027	YPEL3	P61236	119 aa	Predicted RBP	11.17	□□□□□ -0.62
MED17-222	ENST00000640027	SRSF4	Q08170	494 aa	Known RBP	11.17	□□□□□ -0.62
MED17-222	ENST00000640027	LY96	Q9Y6Y9	160 aa		11.17	□□□□□ -0.62
MED17-222	ENST00000640027		Q86TA4	180 aa		11.17	□□□□□ -0.62
MED17-222	ENST00000640027	REG4	Q9BYZ8	158 aa		11.17	□□□□□ -0.62
MED17-222	ENST00000640027	CYTL1	Q9NRR1	136 aa		11.17	□□□□□ -0.62
MED17-222	ENST00000640027	KLK9	Q9UKQ9	250 aa		11.17	□□□□□ -0.62
MED17-222	ENST00000640027	PFN2	P35080	140 aa		11.16	□□□□□ -0.62
MED17-222	ENST00000640027	APOC4	P55056	127 aa		11.16	□□□□□ -0.62
MED17-222	ENST00000640027	C2orf82	Q6UX34	121 aa		11.16	□□□□□ -0.62
MED17-222	ENST00000640027	TMEM256	Q8N2U0	113 aa		11.16	□□□□□ -0.62
MED17-222	ENST00000640027	MCRIP2	Q9BUT9	160 aa	Known RBP	11.16	□□□□□ -0.62
MED17-222	ENST00000640027	KLF12	Q9Y4X4	402 aa		11.16	□□□□□ -0.62
MED17-222	ENST00000640027	EREG	O14944	169 aa		11.16	□□□□□ -0.62
MED17-222	ENST00000640027	LOX	P28300	417 aa	Predicted RBP	11.16	□□□□□ -0.62
MED17-222	ENST00000640027	FOXL2NB	Q6ZUU3	175 aa		11.16	□□□□□ -0.62
MED17-222	ENST00000640027	HEATR5A	Q86XA9	2040 aa		11.16	□□□□□ -0.62
MED17-222	ENST00000640027	IGLV3-9	A0A075B6K5	115 aa		11.16	□□□□□ -0.62
MED17-222	ENST00000640027	VWC2L	B2RUY7	222 aa		11.16	□□□□□ -0.62
MED17-222	ENST00000640027	PAX9	P55771	341 aa		11.16	□□□□□ -0.62
MED17-222	ENST00000640027	OCIAD2	Q56VL3	154 aa		11.16	□□□□□ -0.62
MED17-222	ENST00000640027	TRAV8-3	A0A0A6YYJ7	113 aa		11.16	□□□□□ -0.62
MED17-222	ENST00000640027	FNDC10	F2Z333	226 aa		11.16	□□□□□ -0.62
MED17-222	ENST00000640027	GAGE2B	Q13066	116 aa		11.16	□□□□□ -0.62
MED17-222	ENST00000640027	GAGE2E	Q4V326	116 aa		11.16	□□□□□ -0.62
MED17-222	ENST00000640027	GAGE2D	Q9UEU5	116 aa		11.16	□□□□□ -0.62
MED17-222	ENST00000640027	hDV102S1	A0JD36	115 aa		11.15	□□□□□ -0.62
MED17-222	ENST00000640027		J3QLI3	93 aa		11.15	□□□□□ -0.62
MED17-222	ENST00000640027	HELZ	P42694	1942 aa	Known RBP	11.15	□□□□□ -0.62
MED17-222	ENST00000640027	AZU1	P20160	251 aa		11.15	□□□□□ -0.62
MED17-222	ENST00000640027	DLX4	Q92988	240 aa	Predicted RBP	11.15	□□□□□ -0.62
MED17-222	ENST00000640027	SNHG12	Q9BXW3	62 aa		11.15	□□□□□ -0.62
MED17-222	ENST00000640027		Q6ZR03	302 aa		11.15	□□□□□ -0.62
MED17-222	ENST00000640027	NKAPP1	Q8N9T2	125 aa		11.15	□□□□□ -0.62
MED17-222	ENST00000640027	ZNRF2	Q8NHG8	242 aa		11.15	□□□□□ -0.62
MED17-222	ENST00000640027	TNFRSF6B	O95407	300 aa		11.14	□□□□□ -0.63
MED17-222	ENST00000640027	ZNF114	Q8NC26	417 aa		11.14	□□□□□ -0.63
MED17-222	ENST00000640027	PTPRS	Q13332	1948 aa		11.14	□□□□□ -0.63
MED17-222	ENST00000640027	IGHV1OR15-1	A0A075B7D0	117 aa		11.14	□□□□□ -0.63
MED17-222	ENST00000640027	C3orf79	P0CE67	100 aa		11.14	□□□□□ -0.63
MED17-222	ENST00000640027	LMO1	P25800	156 aa		11.14	□□□□□ -0.63
MED17-222	ENST00000640027	QRFP	P83859	136 aa		11.14	□□□□□ -0.63
MED17-222	ENST00000640027	KLF5	Q13887	457 aa	Predicted RBP	11.14	□□□□□ -0.63
MED17-222	ENST00000640027	FREM1	Q5H8C1	2179 aa		11.14	□□□□□ -0.63
MED17-222	ENST00000640027	CDKN1B	P46527	198 aa		11.14	□□□□□ -0.63
MED17-222	ENST00000640027	HAPLN4	Q86UW8	402 aa		11.14	□□□□□ -0.63
MED17-222	ENST00000640027	ZMAT4	Q9H898	229 aa		11.14	□□□□□ -0.63
MED17-222	ENST00000640027	NXPH4	O95158	308 aa		11.13	□□□□□ -0.63
MED17-222	ENST00000640027	PFN1	P07737	140 aa	Known RBP	11.13	□□□□□ -0.63
MED17-222	ENST00000640027	C2orf66	Q6UXQ4	117 aa		11.13	□□□□□ -0.63
MED17-222	ENST00000640027	HIST3H2BB	Q8N257	126 aa		11.13	□□□□□ -0.63
MED17-222	ENST00000640027	MRAP	Q8TCY5	172 aa		11.13	□□□□□ -0.63
MED17-222	ENST00000640027	FN1	P02751	2386 aa	Known RBP	11.13	□□□□□ -0.63
MED17-222	ENST00000640027	TRAV12-2	A0A075B6T6	113 aa		11.13	□□□□□ -0.63
MED17-222	ENST00000640027	IGKV1-6	A0A0C4DH72	117 aa		11.13	□□□□□ -0.63
MED17-222	ENST00000640027	C1orf194	Q5T5A4	169 aa		11.13	□□□□□ -0.63
MED17-222	ENST00000640027	KLF2	Q9Y5W3	355 aa	Predicted RBP	11.13	□□□□□ -0.63
MED17-222	ENST00000640027	SYS1-DBNDD2	H3BUS1	97 aa		11.13	□□□□□ -0.63
MED17-222	ENST00000640027	PMVK	Q15126	192 aa		11.13	□□□□□ -0.63
MED17-222	ENST00000640027	ANAPC13	Q9BS18	74 aa		11.13	□□□□□ -0.63
MED17-222	ENST00000640027	EDA2R	Q9HAV5	297 aa		11.13	□□□□□ -0.63
MED17-222	ENST00000640027	NDUFS7	O75251	213 aa		11.13	□□□□□ -0.63
MED17-222	ENST00000640027		Q8TCH9	128 aa		11.13	□□□□□ -0.63
MED17-222	ENST00000640027	CHAC1	Q9BUX1	264 aa		11.13	□□□□□ -0.63
MED17-222	ENST00000640027	TP53TG1	Q9Y2A0	90 aa		11.13	□□□□□ -0.63
MED17-222	ENST00000640027		A0A087X0K7	114 aa		11.12	□□□□□ -0.63
MED17-222	ENST00000640027	NDUFA4	O00483	81 aa		11.12	□□□□□ -0.63
MED17-222	ENST00000640027	ELANE	P08246	267 aa		11.12	□□□□□ -0.63
MED17-222	ENST00000640027	TMEM243	Q9BU79	118 aa		11.12	□□□□□ -0.63
MED17-222	ENST00000640027	MRPL27	Q9P0M9	148 aa	Known RBP	11.12	□□□□□ -0.63
MED17-222	ENST00000640027	ZNF106	Q9H2Y7	1883 aa	Known RBP	11.12	□□□□□ -0.63
MED17-222	ENST00000640027	SDHAF1	A6NFY7	115 aa		11.12	□□□□□ -0.63
MED17-222	ENST00000640027	NDUFA4L2	Q9NRX3	87 aa		11.12	□□□□□ -0.63
MED17-222	ENST00000640027	TMEM213	A2RRL7	107 aa		11.12	□□□□□ -0.63
MED17-222	ENST00000640027	DUX4L9	Q6RFH8	374 aa	Predicted RBP	11.12	□□□□□ -0.63
MED17-222	ENST00000640027	C8orf86	Q6ZUL3	223 aa		11.12	□□□□□ -0.63
MED17-222	ENST00000640027	OVOL2	Q9BRP0	275 aa		11.12	□□□□□ -0.63
MED17-222	ENST00000640027	TMEM14B	Q9NUH8	114 aa		11.12	□□□□□ -0.63
MED17-222	ENST00000640027	NOTCH4	Q99466	2003 aa		11.12	□□□□□ -0.63
MED17-222	ENST00000640027	COLCA2	A8K830	154 aa		11.11	□□□□□ -0.63
MED17-222	ENST00000640027	GAGE6	Q13070	117 aa		11.11	□□□□□ -0.63
MED17-222	ENST00000640027	VWC2	Q2TAL6	325 aa		11.11	□□□□□ -0.63
MED17-222	ENST00000640027	RMI2	Q96E14	147 aa		11.11	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms