RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 FANCMQ8IYD8 2048 aa14.77□□□□□ -0.05
SCARB2-213ENST00000638680 MORN5Q5VZ52 161 aa14.77□□□□□ -0.05
SCARB2-213ENST00000638680 IGHV3-16A0A0C4DH30 117 aa14.77□□□□□ -0.05
SCARB2-213ENST00000638680 FGF6P10767 208 aa14.77□□□□□ -0.05
SCARB2-213ENST00000638680 OR11H6Q8NGC7 330 aa14.77□□□□□ -0.05
SCARB2-213ENST00000638680 GATA4P43694 442 aa14.76□□□□□ -0.05
SCARB2-213ENST00000638680 LYPD6BQ8NI32 183 aa14.76□□□□□ -0.05
SCARB2-213ENST00000638680 SDHAF1A6NFY7 115 aa14.76□□□□□ -0.05
SCARB2-213ENST00000638680 Q6ZS92 163 aa14.76□□□□□ -0.05
SCARB2-213ENST00000638680 G3V318 75 aa14.76□□□□□ -0.05
SCARB2-213ENST00000638680 ANXA2RQ3ZCQ2 193 aa14.76□□□□□ -0.05
SCARB2-213ENST00000638680 HLA-DRB4P13762 266 aa14.76□□□□□ -0.05
SCARB2-213ENST00000638680 HLA-DRB4X5D2U9 266 aa14.76□□□□□ -0.05
SCARB2-213ENST00000638680 TCF20Q9UGU0 1960 aaKnown RBP14.75□□□□□ -0.05
SCARB2-213ENST00000638680 TEX36Q5VZQ5 186 aa14.75□□□□□ -0.05
SCARB2-213ENST00000638680 SLX1AQ9BQ83 275 aa14.75□□□□□ -0.05
SCARB2-213ENST00000638680 H3BMG7 143 aa14.75□□□□□ -0.05
SCARB2-213ENST00000638680 DEFB130BP0DP73 79 aa14.75□□□□□ -0.05
SCARB2-213ENST00000638680 DEFB130AP0DP74 79 aa14.75□□□□□ -0.05
SCARB2-213ENST00000638680 GNLYP22749 145 aa14.75□□□□□ -0.05
SCARB2-213ENST00000638680 DKK2Q9UBU2 259 aa14.75□□□□□ -0.05
SCARB2-213ENST00000638680 SOCS3O14543 225 aa14.74□□□□□ -0.05
SCARB2-213ENST00000638680 NCOR1P1Q9H4R4 102 aa14.74□□□□□ -0.05
SCARB2-213ENST00000638680 GAGE12JA6NER3 117 aa14.74□□□□□ -0.05
SCARB2-213ENST00000638680 GAGE4Q13068 117 aa14.74□□□□□ -0.05
SCARB2-213ENST00000638680 GAGE5Q13069 117 aa14.74□□□□□ -0.05
SCARB2-213ENST00000638680 GAGE12HA6NDE8 117 aa14.74□□□□□ -0.05
SCARB2-213ENST00000638680 VOPP1Q96AW1 172 aa14.74□□□□□ -0.05
SCARB2-213ENST00000638680 C1QTNF4Q9BXJ3 329 aa14.74□□□□□ -0.05
SCARB2-213ENST00000638680 UBE2E1P51965 193 aa14.73□□□□□ -0.05
SCARB2-213ENST00000638680 CEP250Q9BV73 2442 aa14.73□□□□□ -0.05
SCARB2-213ENST00000638680 NDUFS7O75251 213 aa14.73□□□□□ -0.05
SCARB2-213ENST00000638680 INAFM2P0DMQ5 153 aa14.73□□□□□ -0.05
SCARB2-213ENST00000638680 THAP8Q8NA92 274 aa14.73□□□□□ -0.05
SCARB2-213ENST00000638680 DOCK11Q5JSL3 2073 aa14.73□□□□□ -0.05
SCARB2-213ENST00000638680 DIAPH2-AS1Q14236 149 aa14.73□□□□□ -0.05
SCARB2-213ENST00000638680 Q6ZVH6 145 aa14.73□□□□□ -0.05
SCARB2-213ENST00000638680 AKAP6Q13023 2319 aa14.72□□□□□ -0.05
SCARB2-213ENST00000638680 XCL2Q9UBD3 114 aa14.72□□□□□ -0.05
SCARB2-213ENST00000638680 LTAP01374 205 aa14.72□□□□□ -0.05
SCARB2-213ENST00000638680 IGLV3-1P01715 115 aa14.72□□□□□ -0.05
SCARB2-213ENST00000638680 LOXP28300 417 aaPredicted RBP14.72□□□□□ -0.05
SCARB2-213ENST00000638680 PRO1854Q9UHT4 67 aa14.72□□□□□ -0.05
SCARB2-213ENST00000638680 CFHR3Q02985 330 aa14.72□□□□□ -0.05
SCARB2-213ENST00000638680 F8WEM9 126 aa14.72□□□□□ -0.05
SCARB2-213ENST00000638680 PFN2P35080 140 aa14.72□□□□□ -0.05
SCARB2-213ENST00000638680 SMIM2Q9BVW6 85 aa14.72□□□□□ -0.05
SCARB2-213ENST00000638680 TRAV12-2A0A075B6T6 113 aa14.71□□□□□ -0.05
SCARB2-213ENST00000638680 PRR20EP86478 221 aa14.71□□□□□ -0.05
SCARB2-213ENST00000638680 PRR20CP86479 221 aa14.71□□□□□ -0.05
SCARB2-213ENST00000638680 PRR20DP86480 221 aa14.71□□□□□ -0.05
SCARB2-213ENST00000638680 PRR20BP86481 221 aa14.71□□□□□ -0.05
SCARB2-213ENST00000638680 PRR20AP86496 221 aa14.71□□□□□ -0.05
SCARB2-213ENST00000638680 ZDBF2Q9HCK1 2354 aa14.71□□□□□ -0.05
SCARB2-213ENST00000638680 IGHV3-38A0A0C4DH36 116 aa14.71□□□□□ -0.05
SCARB2-213ENST00000638680 F8VRH5 84 aa14.71□□□□□ -0.05
SCARB2-213ENST00000638680 IGHV1OR15-1A0A075B7D0 117 aa14.71□□□□□ -0.05
SCARB2-213ENST00000638680 IGLC7A0M8Q6 106 aa14.71□□□□□ -0.05
SCARB2-213ENST00000638680 IFITM1P13164 125 aa14.71□□□□□ -0.05
SCARB2-213ENST00000638680 TAL2Q16559 108 aa14.71□□□□□ -0.05
SCARB2-213ENST00000638680 AMTNQ6UX39 209 aa14.71□□□□□ -0.05
SCARB2-213ENST00000638680 RHODO00212 210 aa14.71□□□□□ -0.06
SCARB2-213ENST00000638680 SIVA1O15304 175 aa14.71□□□□□ -0.06
SCARB2-213ENST00000638680 NDUFA12Q9UI09 145 aa14.71□□□□□ -0.06
SCARB2-213ENST00000638680 SPANXA1Q9NS26 97 aa14.7□□□□□ -0.06
SCARB2-213ENST00000638680 AZU1P20160 251 aa14.7□□□□□ -0.06
SCARB2-213ENST00000638680 ATP6V0BQ99437 205 aa14.7□□□□□ -0.06
SCARB2-213ENST00000638680 LINC00311Q8N616 119 aa14.7□□□□□ -0.06
SCARB2-213ENST00000638680 IGLC1P0CG04 106 aa14.7□□□□□ -0.06
SCARB2-213ENST00000638680 YLPM1P49750 1951 aaKnown RBP14.69□□□□□ -0.06
SCARB2-213ENST00000638680 KLF5Q13887 457 aaPredicted RBP14.69□□□□□ -0.06
SCARB2-213ENST00000638680 K7EM74 188 aa14.69□□□□□ -0.06
SCARB2-213ENST00000638680 C12orf74Q32Q52 190 aa14.68□□□□□ -0.06
SCARB2-213ENST00000638680 LINC01356Q8N9X3 169 aa14.68□□□□□ -0.06
SCARB2-213ENST00000638680 C17orf77Q96MU5 243 aa14.68□□□□□ -0.06
SCARB2-213ENST00000638680 TRIOBPQ9H2D6 2365 aa14.68□□□□□ -0.06
SCARB2-213ENST00000638680 CDK2AP2O75956 126 aa14.68□□□□□ -0.06
SCARB2-213ENST00000638680 TRBV25-1A0A075B6N4 114 aa14.68□□□□□ -0.06
SCARB2-213ENST00000638680 RNF166Q96A37 237 aaPredicted RBP14.68□□□□□ -0.06
SCARB2-213ENST00000638680 WIPF2Q8TF74 440 aaPredicted RBP14.68□□□□□ -0.06
SCARB2-213ENST00000638680 CARD19Q96LW7 228 aa14.68□□□□□ -0.06
SCARB2-213ENST00000638680 FAM120AOSQ5T036 256 aa14.67□□□□□ -0.06
SCARB2-213ENST00000638680 PLXNA4Q9HCM2 1894 aa14.67□□□□□ -0.06
SCARB2-213ENST00000638680 KIR2DL5BA0A0G2JN68 375 aa14.67□□□□□ -0.06
SCARB2-213ENST00000638680 KIR2DL5BA0A0G2JPC4 375 aa14.67□□□□□ -0.06
SCARB2-213ENST00000638680 KIR2DL5AQ8N109 375 aa14.67□□□□□ -0.06
SCARB2-213ENST00000638680 ZNF747Q9BV97 191 aa14.67□□□□□ -0.06
SCARB2-213ENST00000638680 PYGO2Q9BRQ0 406 aa14.67□□□□□ -0.06
SCARB2-213ENST00000638680 J3QQQ9 107 aa14.67□□□□□ -0.06
SCARB2-213ENST00000638680 PRR30Q53SZ7 412 aaPredicted RBP14.67□□□□□ -0.06
SCARB2-213ENST00000638680 UBE2DNLQ8IWF7 75 aa14.67□□□□□ -0.06
SCARB2-213ENST00000638680 ZNRF2Q8NHG8 242 aa14.67□□□□□ -0.06
SCARB2-213ENST00000638680 IGLV3-9A0A075B6K5 115 aa14.66□□□□□ -0.06
SCARB2-213ENST00000638680 HEATR1Q9H583 2144 aaKnown RBP14.66□□□□□ -0.06
SCARB2-213ENST00000638680 FNDC1Q4ZHG4 1894 aaPredicted RBP14.66□□□□□ -0.06
SCARB2-213ENST00000638680 NDUFA4O00483 81 aa14.66□□□□□ -0.06
SCARB2-213ENST00000638680 CCL25O15444 150 aa14.66□□□□□ -0.06
SCARB2-213ENST00000638680 UTF1Q5T230 341 aa14.66□□□□□ -0.06
SCARB2-213ENST00000638680 LY6G6EA0A0G2JKS1 128 aa14.65□□□□□ -0.06
SCARB2-213ENST00000638680 U3KQA8 63 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms