RNA–Protein interactions for RNA: ENST00000638155.1

UBE3A-228, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS P3 TSL 5 BASIC

Gene UBE3A, Length 9,131 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-228ENST00000638155 RPL18AQ02543 176 aaKnown RBP10.69□□□□□ -0.7
UBE3A-228ENST00000638155 LINC01545Q5VT33 79 aa10.69□□□□□ -0.7
UBE3A-228ENST00000638155 ADAMTSL3P82987 1691 aa10.69□□□□□ -0.7
UBE3A-228ENST00000638155 PLXNA2O75051 1894 aa10.69□□□□□ -0.7
UBE3A-228ENST00000638155 LINC00527Q9UJ94 153 aa10.68□□□□□ -0.7
UBE3A-228ENST00000638155 MRPL23Q16540 153 aaKnown RBP10.68□□□□□ -0.7
UBE3A-228ENST00000638155 RIF1Q5UIP0 2472 aaKnown RBP10.68□□□□□ -0.7
UBE3A-228ENST00000638155 CDKN1BP46527 198 aa10.68□□□□□ -0.7
UBE3A-228ENST00000638155 NREPQ16612 68 aa10.68□□□□□ -0.7
UBE3A-228ENST00000638155 ANGP03950 147 aaKnown RBP10.68□□□□□ -0.7
UBE3A-228ENST00000638155 C4orf48Q5BLP8 95 aa10.68□□□□□ -0.7
UBE3A-228ENST00000638155 NMSQ5H8A3 153 aa10.68□□□□□ -0.7
UBE3A-228ENST00000638155 DUX4L9Q6RFH8 374 aaPredicted RBP10.68□□□□□ -0.7
UBE3A-228ENST00000638155 A0A0B4J2C4 111 aa10.68□□□□□ -0.7
UBE3A-228ENST00000638155 J3QQQ9 107 aa10.68□□□□□ -0.7
UBE3A-228ENST00000638155 ZFP2Q6ZN57 461 aa10.68□□□□□ -0.7
UBE3A-228ENST00000638155 CREBBPQ92793 2442 aa10.68□□□□□ -0.7
UBE3A-228ENST00000638155 TEX22C9J3V5 150 aa10.68□□□□□ -0.7
UBE3A-228ENST00000638155 IGKV1-5P01602 117 aa10.68□□□□□ -0.7
UBE3A-228ENST00000638155 ARMS2P0C7Q2 107 aa10.68□□□□□ -0.7
UBE3A-228ENST00000638155 CHCHD2Q9Y6H1 151 aaPredicted RBP10.68□□□□□ -0.7
UBE3A-228ENST00000638155 LY6DQ14210 128 aa10.67□□□□□ -0.7
UBE3A-228ENST00000638155 IGHV4-4A0A075B6R2 117 aa10.67□□□□□ -0.7
UBE3A-228ENST00000638155 MRPL14Q6P1L8 145 aaKnown RBP10.67□□□□□ -0.7
UBE3A-228ENST00000638155 IGHV1-3A0A0C4DH29 117 aa10.67□□□□□ -0.7
UBE3A-228ENST00000638155 ADAMTSL1Q8N6G6 1762 aa10.67□□□□□ -0.7
UBE3A-228ENST00000638155 ATP1A1-AS1Q5TC04 95 aa10.67□□□□□ -0.7
UBE3A-228ENST00000638155 SIVA1O15304 175 aa10.67□□□□□ -0.7
UBE3A-228ENST00000638155 SDHAF1A6NFY7 115 aa10.66□□□□□ -0.7
UBE3A-228ENST00000638155 CASC2Q6XLA1 102 aa10.66□□□□□ -0.7
UBE3A-228ENST00000638155 C1QCP02747 245 aa10.66□□□□□ -0.7
UBE3A-228ENST00000638155 LYL1P12980 280 aa10.66□□□□□ -0.7
UBE3A-228ENST00000638155 IGKV4-1P06312 121 aa10.66□□□□□ -0.7
UBE3A-228ENST00000638155 NTN5Q8WTR8 489 aaPredicted RBP10.66□□□□□ -0.7
UBE3A-228ENST00000638155 F8VRH5 84 aa10.66□□□□□ -0.7
UBE3A-228ENST00000638155 BTCP35070 178 aa10.66□□□□□ -0.7
UBE3A-228ENST00000638155 RNF5Q99942 180 aa10.66□□□□□ -0.7
UBE3A-228ENST00000638155 ANKRD39Q53RE8 183 aa10.66□□□□□ -0.7
UBE3A-228ENST00000638155 CLPSL2Q6UWE3 100 aa10.66□□□□□ -0.7
UBE3A-228ENST00000638155 NPYP01303 97 aa10.66□□□□□ -0.7
UBE3A-228ENST00000638155 RFPL3SP0C7P2 107 aa10.66□□□□□ -0.7
UBE3A-228ENST00000638155 RHPN1-AS1Q9BWJ2 59 aa10.66□□□□□ -0.7
UBE3A-228ENST00000638155 OOSP1A8MZH6 123 aa10.66□□□□□ -0.7
UBE3A-228ENST00000638155 C18orf32Q8TCD1 76 aa10.66□□□□□ -0.7
UBE3A-228ENST00000638155 IGKV3D-7A0A0C4DH55 119 aa10.65□□□□□ -0.7
UBE3A-228ENST00000638155 C5orf64Q2M2E5 130 aa10.65□□□□□ -0.7
UBE3A-228ENST00000638155 C8orf49Q96NF6 230 aa10.65□□□□□ -0.7
UBE3A-228ENST00000638155 MGAMO43451 1857 aa10.65□□□□□ -0.7
UBE3A-228ENST00000638155 IGHV1-8P0DP01 117 aa10.65□□□□□ -0.71
UBE3A-228ENST00000638155 RPP25LQ8N5L8 163 aaKnown RBP10.65□□□□□ -0.71
UBE3A-228ENST00000638155 SAP25Q8TEE9 199 aa10.65□□□□□ -0.71
UBE3A-228ENST00000638155 COX7B2Q8TF08 81 aa10.65□□□□□ -0.71
UBE3A-228ENST00000638155 PTPRQQ9UMZ3 2332 aa10.65□□□□□ -0.71
UBE3A-228ENST00000638155 IGHV1OR15-1A0A075B7D0 117 aa10.64□□□□□ -0.71
UBE3A-228ENST00000638155 NTN3O00634 580 aaPredicted RBP10.64□□□□□ -0.71
UBE3A-228ENST00000638155 TIRAPP58753 221 aa10.64□□□□□ -0.71
UBE3A-228ENST00000638155 DEFB125Q8N687 156 aa10.64□□□□□ -0.71
UBE3A-228ENST00000638155 RNF183Q96D59 192 aa10.64□□□□□ -0.71
UBE3A-228ENST00000638155 LGALS9BQ3B8N2 356 aa10.64□□□□□ -0.71
UBE3A-228ENST00000638155 LGALS9CQ6DKI2 356 aa10.64□□□□□ -0.71
UBE3A-228ENST00000638155 ZNF493Q6ZR52 646 aa10.64□□□□□ -0.71
UBE3A-228ENST00000638155 ZCCHC24Q8N2G6 241 aaKnown RBP10.64□□□□□ -0.71
UBE3A-228ENST00000638155 SPG11Q96JI7 2443 aa10.64□□□□□ -0.71
UBE3A-228ENST00000638155 ADAMTS7Q9UKP4 1686 aa10.64□□□□□ -0.71
UBE3A-228ENST00000638155 H0YIZ8 118 aa10.64□□□□□ -0.71
UBE3A-228ENST00000638155 SLC25A29Q8N8R3 303 aa10.64□□□□□ -0.71
UBE3A-228ENST00000638155 MESP1Q9BRJ9 268 aa10.64□□□□□ -0.71
UBE3A-228ENST00000638155 TIMM17AQ99595 171 aa10.64□□□□□ -0.71
UBE3A-228ENST00000638155 HGFACQ04756 655 aa10.64□□□□□ -0.71
UBE3A-228ENST00000638155 CTHRC1Q96CG8 243 aa10.64□□□□□ -0.71
UBE3A-228ENST00000638155 ZNF503Q96F45 646 aa10.64□□□□□ -0.71
UBE3A-228ENST00000638155 GATA4P43694 442 aa10.63□□□□□ -0.71
UBE3A-228ENST00000638155 LINC01620Q4KN68 170 aa10.63□□□□□ -0.71
UBE3A-228ENST00000638155 PLXNB3Q9ULL4 1909 aa10.63□□□□□ -0.71
UBE3A-228ENST00000638155 PSPNO60542 156 aa10.63□□□□□ -0.71
UBE3A-228ENST00000638155 XCL1P47992 114 aa10.63□□□□□ -0.71
UBE3A-228ENST00000638155 C12orf74Q32Q52 190 aa10.63□□□□□ -0.71
UBE3A-228ENST00000638155 KLK9Q9UKQ9 250 aa10.63□□□□□ -0.71
UBE3A-228ENST00000638155 TMEM213A2RRL7 107 aa10.63□□□□□ -0.71
UBE3A-228ENST00000638155 TMEM200BQ69YZ2 307 aa10.63□□□□□ -0.71
UBE3A-228ENST00000638155 AMTNQ6UX39 209 aa10.63□□□□□ -0.71
UBE3A-228ENST00000638155 C9orf47Q6ZRZ4 202 aa10.63□□□□□ -0.71
UBE3A-228ENST00000638155 WBP1Q96G27 269 aa10.63□□□□□ -0.71
UBE3A-228ENST00000638155 TICRRQ7Z2Z1 1910 aa10.63□□□□□ -0.71
UBE3A-228ENST00000638155 TRAV26-2A0A0B4J265 109 aa10.63□□□□□ -0.71
UBE3A-228ENST00000638155 H0YJW9 148 aa10.63□□□□□ -0.71
UBE3A-228ENST00000638155 HS3ST6Q96QI5 342 aa10.63□□□□□ -0.71
UBE3A-228ENST00000638155 ETV2O00321 342 aaPredicted RBP10.63□□□□□ -0.71
UBE3A-228ENST00000638155 SHANK2-AS3Q9BTD1 123 aa10.63□□□□□ -0.71
UBE3A-228ENST00000638155 ZNF492Q9P255 531 aa10.63□□□□□ -0.71
UBE3A-228ENST00000638155 XCL2Q9UBD3 114 aa10.63□□□□□ -0.71
UBE3A-228ENST00000638155 PRSS47A8MTI9 375 aa10.63□□□□□ -0.71
UBE3A-228ENST00000638155 SPINK13Q1W4C9 94 aa10.63□□□□□ -0.71
UBE3A-228ENST00000638155 MRPL51Q4U2R6 128 aaKnown RBP10.63□□□□□ -0.71
UBE3A-228ENST00000638155 SLC25A45Q8N413 288 aa10.63□□□□□ -0.71
UBE3A-228ENST00000638155 MPLKIPQ8TAP9 179 aa10.63□□□□□ -0.71
UBE3A-228ENST00000638155 IGFL4Q6B9Z1 124 aa10.62□□□□□ -0.71
UBE3A-228ENST00000638155 B4DSR2 109 aa10.62□□□□□ -0.71
UBE3A-228ENST00000638155 H3BUX3 64 aa10.62□□□□□ -0.71
UBE3A-228ENST00000638155 HIGD2BQ4VC39 106 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms