RNA–Protein interactions for RNA: ENST00000637927.1

CACNA1A-253, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-253ENST00000637927 SIPA1L1O43166 1804 aa13.69□□□□□ -0.22
CACNA1A-253ENST00000637927 FAM186AA6NE01 2351 aa13.69□□□□□ -0.22
CACNA1A-253ENST00000637927 A0A0G2JMZ2 1700 aa13.69□□□□□ -0.22
CACNA1A-253ENST00000637927 LRRC37A2A6NM11 1700 aa13.69□□□□□ -0.22
CACNA1A-253ENST00000637927 PROP1O75360 226 aa13.69□□□□□ -0.22
CACNA1A-253ENST00000637927 UBL5Q9BZL1 73 aa13.69□□□□□ -0.22
CACNA1A-253ENST00000637927 LYPD3O95274 346 aa13.68□□□□□ -0.22
CACNA1A-253ENST00000637927 LINC00473A8K010 186 aa13.68□□□□□ -0.22
CACNA1A-253ENST00000637927 ZC2HC1BQ5TFG8 222 aa13.68□□□□□ -0.22
CACNA1A-253ENST00000637927 C5orf64Q2M2E5 130 aa13.68□□□□□ -0.22
CACNA1A-253ENST00000637927 RNF138Q8WVD3 245 aa13.68□□□□□ -0.22
CACNA1A-253ENST00000637927 ETDCA0A1B0GVM5 59 aa13.68□□□□□ -0.22
CACNA1A-253ENST00000637927 ZNF124Q15973 351 aa13.67□□□□□ -0.22
CACNA1A-253ENST00000637927 DAZ1Q9NQZ3 744 aaKnown RBP13.67□□□□□ -0.22
CACNA1A-253ENST00000637927 PTPRDP23468 1912 aa13.67□□□□□ -0.22
CACNA1A-253ENST00000637927 IGHV4-59P01825 116 aa13.67□□□□□ -0.22
CACNA1A-253ENST00000637927 TRPT1Q86TN4 253 aaKnown RBP13.67□□□□□ -0.22
CACNA1A-253ENST00000637927 AMTNQ6UX39 209 aa13.67□□□□□ -0.22
CACNA1A-253ENST00000637927 HRCT1Q6UXD1 115 aa13.67□□□□□ -0.22
CACNA1A-253ENST00000637927 FGF6P10767 208 aa13.66□□□□□ -0.22
CACNA1A-253ENST00000637927 GPHB5Q86YW7 130 aa13.66□□□□□ -0.22
CACNA1A-253ENST00000637927 NEUROG3Q9Y4Z2 214 aa13.66□□□□□ -0.22
CACNA1A-253ENST00000637927 RMI2Q96E14 147 aa13.66□□□□□ -0.22
CACNA1A-253ENST00000637927 ZNF362Q5T0B9 420 aaPredicted RBP13.66□□□□□ -0.22
CACNA1A-253ENST00000637927 C20orf204Q6ZNR8 217 aa13.66□□□□□ -0.22
CACNA1A-253ENST00000637927 CRYBA4P53673 196 aa13.66□□□□□ -0.22
CACNA1A-253ENST00000637927 LY6G6FQ5SQ64 297 aa13.66□□□□□ -0.22
CACNA1A-253ENST00000637927 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.66□□□□□ -0.22
CACNA1A-253ENST00000637927 GLRX5Q86SX6 157 aa13.66□□□□□ -0.22
CACNA1A-253ENST00000637927 ZNF407Q9C0G0 2248 aa13.66□□□□□ -0.22
CACNA1A-253ENST00000637927 WDR90Q96KV7 1748 aa13.65□□□□□ -0.22
CACNA1A-253ENST00000637927 INAFM2P0DMQ5 153 aa13.65□□□□□ -0.22
CACNA1A-253ENST00000637927 CRYGSP22914 178 aa13.65□□□□□ -0.22
CACNA1A-253ENST00000637927 IGKV1D-17A0A075B6S4 117 aa13.65□□□□□ -0.22
CACNA1A-253ENST00000637927 NTF4P34130 210 aa13.65□□□□□ -0.22
CACNA1A-253ENST00000637927 FAM223BA6NKX1 122 aa13.65□□□□□ -0.22
CACNA1A-253ENST00000637927 IGKV4-1P06312 121 aa13.65□□□□□ -0.22
CACNA1A-253ENST00000637927 FAM223AQ8IWN6 122 aa13.65□□□□□ -0.22
CACNA1A-253ENST00000637927 CARHSP1Q9Y2V2 147 aaKnown RBP13.65□□□□□ -0.22
CACNA1A-253ENST00000637927 IGKV1-16P04430 117 aa13.65□□□□□ -0.22
CACNA1A-253ENST00000637927 C8orf86Q6ZUL3 223 aa13.65□□□□□ -0.22
CACNA1A-253ENST00000637927 I3L3M4 83 aa13.64□□□□□ -0.23
CACNA1A-253ENST00000637927 SEC61GP60059 68 aa13.64□□□□□ -0.23
CACNA1A-253ENST00000637927 LYPD6BQ8NI32 183 aa13.64□□□□□ -0.23
CACNA1A-253ENST00000637927 ADAMTS7Q9UKP4 1686 aa13.64□□□□□ -0.23
CACNA1A-253ENST00000637927 ZFP36P26651 326 aaKnown RBP13.64□□□□□ -0.23
CACNA1A-253ENST00000637927 A0A1B0GWJ7 208 aa13.64□□□□□ -0.23
CACNA1A-253ENST00000637927 BOD1L2Q8IYS8 172 aa13.64□□□□□ -0.23
CACNA1A-253ENST00000637927 CFHR4Q92496 578 aa13.64□□□□□ -0.23
CACNA1A-253ENST00000637927 IGKV2-24A0A0C4DH68 120 aa13.64□□□□□ -0.23
CACNA1A-253ENST00000637927 OSTCQ9NRP0 149 aa13.64□□□□□ -0.23
CACNA1A-253ENST00000637927 KLF2Q9Y5W3 355 aaPredicted RBP13.64□□□□□ -0.23
CACNA1A-253ENST00000637927 GBF1Q92538 1859 aa13.64□□□□□ -0.23
CACNA1A-253ENST00000637927 CEP250Q9BV73 2442 aa13.64□□□□□ -0.23
CACNA1A-253ENST00000637927 SLURP1P55000 103 aa13.63□□□□□ -0.23
CACNA1A-253ENST00000637927 COX7B2Q8TF08 81 aa13.63□□□□□ -0.23
CACNA1A-253ENST00000637927 SRRM5B3KS81 715 aa13.63□□□□□ -0.23
CACNA1A-253ENST00000637927 A0A087WWC5 75 aa13.63□□□□□ -0.23
CACNA1A-253ENST00000637927 PPBPP02775 128 aa13.63□□□□□ -0.23
CACNA1A-253ENST00000637927 CSRP3P50461 194 aa13.63□□□□□ -0.23
CACNA1A-253ENST00000637927 HEPN1Q6WQI6 88 aa13.63□□□□□ -0.23
CACNA1A-253ENST00000637927 PIFOQ8TCI5 191 aa13.63□□□□□ -0.23
CACNA1A-253ENST00000637927 IGHG2P01859 326 aa13.62□□□□□ -0.23
CACNA1A-253ENST00000637927 SDK2Q58EX2 2172 aa13.62□□□□□ -0.23
CACNA1A-253ENST00000637927 SPTSSBQ8NFR3 76 aa13.62□□□□□ -0.23
CACNA1A-253ENST00000637927 IGKV3D-7A0A0C4DH55 119 aa13.62□□□□□ -0.23
CACNA1A-253ENST00000637927 IGHV1OR15-1A0A075B7D0 117 aa13.62□□□□□ -0.23
CACNA1A-253ENST00000637927 GAGE12HA6NDE8 117 aa13.62□□□□□ -0.23
CACNA1A-253ENST00000637927 GNRH2O43555 120 aa13.61□□□□□ -0.23
CACNA1A-253ENST00000637927 MINOS1Q5TGZ0 78 aa13.61□□□□□ -0.23
CACNA1A-253ENST00000637927 MINOS1-NBL1R4GNA1 71 aa13.61□□□□□ -0.23
CACNA1A-253ENST00000637927 NDUFB8O95169 186 aa13.61□□□□□ -0.23
CACNA1A-253ENST00000637927 IGHV4-30-4P0DP06 118 aa13.61□□□□□ -0.23
CACNA1A-253ENST00000637927 IGHV4-31P0DP07 118 aa13.61□□□□□ -0.23
CACNA1A-253ENST00000637927 HLA-DMBP28068 263 aa13.61□□□□□ -0.23
CACNA1A-253ENST00000637927 TMEM258P61165 79 aa13.61□□□□□ -0.23
CACNA1A-253ENST00000637927 USMG5Q96IX5 58 aa13.61□□□□□ -0.23
CACNA1A-253ENST00000637927 OVOL2Q9BRP0 275 aa13.61□□□□□ -0.23
CACNA1A-253ENST00000637927 M0R2N4 97 aa13.61□□□□□ -0.23
CACNA1A-253ENST00000637927 MLST8Q9BVC4 326 aa13.61□□□□□ -0.23
CACNA1A-253ENST00000637927 AGMATQ9BSE5 352 aa13.6□□□□□ -0.23
CACNA1A-253ENST00000637927 HIST1H2BKO60814 126 aa13.6□□□□□ -0.23
CACNA1A-253ENST00000637927 HIST1H2BJP06899 126 aa13.6□□□□□ -0.23
CACNA1A-253ENST00000637927 HIST1H2BOP23527 126 aa13.6□□□□□ -0.23
CACNA1A-253ENST00000637927 HIST1H2BBP33778 126 aa13.6□□□□□ -0.23
CACNA1A-253ENST00000637927 HIST1H2BDP58876 126 aa13.6□□□□□ -0.23
CACNA1A-253ENST00000637927 HIST1H2BCP62807 126 aa13.6□□□□□ -0.23
CACNA1A-253ENST00000637927 HIST2H2BEQ16778 126 aa13.6□□□□□ -0.23
CACNA1A-253ENST00000637927 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.6□□□□□ -0.23
CACNA1A-253ENST00000637927 HIST1H2BHQ93079 126 aa13.6□□□□□ -0.23
CACNA1A-253ENST00000637927 HS3ST6Q96QI5 342 aa13.6□□□□□ -0.23
CACNA1A-253ENST00000637927 HIST1H2BNQ99877 126 aa13.6□□□□□ -0.23
CACNA1A-253ENST00000637927 HIST1H2BMQ99879 126 aa13.6□□□□□ -0.23
CACNA1A-253ENST00000637927 U3KQE9 123 aa13.6□□□□□ -0.23
CACNA1A-253ENST00000637927 IGLV3-9A0A075B6K5 115 aa13.6□□□□□ -0.23
CACNA1A-253ENST00000637927 PNRC2Q9NPJ4 139 aaKnown RBP13.6□□□□□ -0.23
CACNA1A-253ENST00000637927 IGLV3-32A0A0A0MS00 114 aa13.6□□□□□ -0.23
CACNA1A-253ENST00000637927 DAND5Q8N907 189 aa13.6□□□□□ -0.23
CACNA1A-253ENST00000637927 CARD19Q96LW7 228 aa13.6□□□□□ -0.23
CACNA1A-253ENST00000637927 CAMK2N2Q96S95 79 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms