RNA–Protein interactions for RNA: ENST00000637777.1

CACNA1A-249, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 728 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-249ENST00000637777 RNF222A6NCQ9 220 aa10.31□□□□□ -0.76
CACNA1A-249ENST00000637777 SMLR1H3BR10 107 aa10.31□□□□□ -0.76
CACNA1A-249ENST00000637777 DEFB130BP0DP73 79 aa10.31□□□□□ -0.76
CACNA1A-249ENST00000637777 DEFB130AP0DP74 79 aa10.31□□□□□ -0.76
CACNA1A-249ENST00000637777 RPL7L1Q6DKI1 246 aaKnown RBP10.31□□□□□ -0.76
CACNA1A-249ENST00000637777 GNPNAT1Q96EK6 184 aaPredicted RBP10.31□□□□□ -0.76
CACNA1A-249ENST00000637777 C16orf74Q96GX8 76 aa10.31□□□□□ -0.76
CACNA1A-249ENST00000637777 LINC00477Q96M19 166 aa10.31□□□□□ -0.76
CACNA1A-249ENST00000637777 ODF3Q96PU9 254 aa10.31□□□□□ -0.76
CACNA1A-249ENST00000637777 C20orf144Q9BQM9 153 aa10.31□□□□□ -0.76
CACNA1A-249ENST00000637777 SH3BGRL3Q9H299 93 aa10.31□□□□□ -0.76
CACNA1A-249ENST00000637777 PLA2G2EQ9NZK7 142 aa10.31□□□□□ -0.76
CACNA1A-249ENST00000637777 ALMS1Q8TCU4 4167 aa10.31□□□□□ -0.76
CACNA1A-249ENST00000637777 SACSQ9NZJ4 4579 aa10.3□□□□□ -0.76
CACNA1A-249ENST00000637777 GPX1P07203 203 aa10.3□□□□□ -0.76
CACNA1A-249ENST00000637777 ARL14EPLP0DKL9 152 aa10.3□□□□□ -0.76
CACNA1A-249ENST00000637777 AZU1P20160 251 aa10.3□□□□□ -0.76
CACNA1A-249ENST00000637777 RNASE4P34096 147 aaKnown RBP10.3□□□□□ -0.76
CACNA1A-249ENST00000637777 TCTAP57738 103 aa10.3□□□□□ -0.76
CACNA1A-249ENST00000637777 LYPD1Q8N2G4 141 aa10.3□□□□□ -0.76
CACNA1A-249ENST00000637777 OR2G3Q8NGZ4 309 aa10.3□□□□□ -0.76
CACNA1A-249ENST00000637777 ZNF503Q96F45 646 aa10.3□□□□□ -0.76
CACNA1A-249ENST00000637777 VGLL1Q99990 258 aa10.3□□□□□ -0.76
CACNA1A-249ENST00000637777 AGPAT4-IT1Q9H0P7 198 aa10.3□□□□□ -0.76
CACNA1A-249ENST00000637777 C7orf71A4D174 169 aa10.29□□□□□ -0.76
CACNA1A-249ENST00000637777 LYRM9A8MSI8 78 aa10.29□□□□□ -0.76
CACNA1A-249ENST00000637777 SNURFLB1AK76 121 aa10.29□□□□□ -0.76
CACNA1A-249ENST00000637777 SLC25A5P05141 298 aaKnown RBP10.29□□□□□ -0.76
CACNA1A-249ENST00000637777 SERF2P84101 59 aa10.29□□□□□ -0.76
CACNA1A-249ENST00000637777 Q8TAT8 98 aa10.29□□□□□ -0.76
CACNA1A-249ENST00000637777 TMEM263Q8WUH6 116 aaKnown RBP10.29□□□□□ -0.76
CACNA1A-249ENST00000637777 ACTR3CQ9C0K3 210 aaPredicted RBP10.29□□□□□ -0.76
CACNA1A-249ENST00000637777 PGPA6NDG6 321 aa10.28□□□□□ -0.76
CACNA1A-249ENST00000637777 BTN1A1Q13410 526 aa10.28□□□□□ -0.76
CACNA1A-249ENST00000637777 AKR1C8PQ5T2L2 129 aa10.28□□□□□ -0.76
CACNA1A-249ENST00000637777 C9orf47Q6ZRZ4 202 aa10.28□□□□□ -0.76
CACNA1A-249ENST00000637777 RXFP4Q8TDU9 374 aa10.28□□□□□ -0.76
CACNA1A-249ENST00000637777 NDUFAF3Q9BU61 184 aa10.28□□□□□ -0.76
CACNA1A-249ENST00000637777 NOP10Q9NPE3 64 aaKnown RBP10.28□□□□□ -0.76
CACNA1A-249ENST00000637777 OTORQ9NRC9 128 aa10.28□□□□□ -0.76
CACNA1A-249ENST00000637777 TIMM8BQ9Y5J9 83 aaPredicted RBP10.28□□□□□ -0.76
CACNA1A-249ENST00000637777 RYR2Q92736 4967 aa10.28□□□□□ -0.76
CACNA1A-249ENST00000637777 CBY3A6NI87 242 aa10.27□□□□□ -0.77
CACNA1A-249ENST00000637777 TAAR5O14804 337 aa10.27□□□□□ -0.77
CACNA1A-249ENST00000637777 ZNF138P52744 262 aa10.27□□□□□ -0.77
CACNA1A-249ENST00000637777 ZNF493Q6ZR52 646 aa10.27□□□□□ -0.77
CACNA1A-249ENST00000637777 RAB24Q969Q5 203 aa10.27□□□□□ -0.77
CACNA1A-249ENST00000637777 PYGO2Q9BRQ0 406 aa10.27□□□□□ -0.77
CACNA1A-249ENST00000637777 ZNF492Q9P255 531 aa10.27□□□□□ -0.77
CACNA1A-249ENST00000637777 DIRC3C9JPN6 131 aa10.26□□□□□ -0.77
CACNA1A-249ENST00000637777 RGS13O14921 159 aa10.26□□□□□ -0.77
CACNA1A-249ENST00000637777 CXorf1O96002 111 aa10.26□□□□□ -0.77
CACNA1A-249ENST00000637777 CD300CQ08708 224 aa10.26□□□□□ -0.77
CACNA1A-249ENST00000637777 LGALS9CQ6DKI2 356 aa10.26□□□□□ -0.77
CACNA1A-249ENST00000637777 GOLT1AQ6ZVE7 132 aa10.26□□□□□ -0.77
CACNA1A-249ENST00000637777 APLNQ9ULZ1 77 aa10.26□□□□□ -0.77
CACNA1A-249ENST00000637777 RBAKDNA6NC62 111 aa10.25□□□□□ -0.77
CACNA1A-249ENST00000637777 G3V3Q6 166 aa10.25□□□□□ -0.77
CACNA1A-249ENST00000637777 STAG3L2P0CL84 134 aa10.25□□□□□ -0.77
CACNA1A-249ENST00000637777 STAG3L3P0CL85 134 aa10.25□□□□□ -0.77
CACNA1A-249ENST00000637777 GCHFRP30047 84 aa10.25□□□□□ -0.77
CACNA1A-249ENST00000637777 RNASE8Q8TDE3 154 aaKnown RBP10.25□□□□□ -0.77
CACNA1A-249ENST00000637777 ARPC5LQ9BPX5 153 aa10.25□□□□□ -0.77
CACNA1A-249ENST00000637777 TMEM167BQ9NRX6 74 aa10.25□□□□□ -0.77
CACNA1A-249ENST00000637777 KANTRA0A1W2PQU2 76 aa10.24□□□□□ -0.77
CACNA1A-249ENST00000637777 KLLNB2CW77 178 aa10.24□□□□□ -0.77
CACNA1A-249ENST00000637777 F5H768 121 aa10.24□□□□□ -0.77
CACNA1A-249ENST00000637777 CRISP2P16562 243 aa10.24□□□□□ -0.77
CACNA1A-249ENST00000637777 GNG5P63218 68 aa10.24□□□□□ -0.77
CACNA1A-249ENST00000637777 UBE2DNLQ8IWF7 75 aa10.24□□□□□ -0.77
CACNA1A-249ENST00000637777 ZNF680Q8NEM1 530 aa10.24□□□□□ -0.77
CACNA1A-249ENST00000637777 CTXND1A0A1B0GTU2 59 aa10.23□□□□□ -0.77
CACNA1A-249ENST00000637777 PLAC8L1A1L4L8 177 aa10.23□□□□□ -0.77
CACNA1A-249ENST00000637777 K7EQM0 130 aa10.23□□□□□ -0.77
CACNA1A-249ENST00000637777 PFDN1O60925 122 aa10.23□□□□□ -0.77
CACNA1A-249ENST00000637777 ATP5G1P05496 136 aa10.23□□□□□ -0.77
CACNA1A-249ENST00000637777 ATP5G3P48201 142 aa10.23□□□□□ -0.77
CACNA1A-249ENST00000637777 PRR9Q5T870 116 aa10.23□□□□□ -0.77
CACNA1A-249ENST00000637777 EIF4E3Q8N5X7 224 aaKnown RBP10.23□□□□□ -0.77
CACNA1A-249ENST00000637777 FAM19A4Q96LR4 140 aa10.23□□□□□ -0.77
CACNA1A-249ENST00000637777 ZNF471Q9BX82 626 aaPredicted RBP10.23□□□□□ -0.77
CACNA1A-249ENST00000637777 NAGKQ9UJ70 344 aa10.23□□□□□ -0.77
CACNA1A-249ENST00000637777 GAGE12BA1L429 117 aa10.22□□□□□ -0.77
CACNA1A-249ENST00000637777 GAGE7O76087 117 aa10.22□□□□□ -0.77
CACNA1A-249ENST00000637777 NMBP08949 121 aa10.22□□□□□ -0.77
CACNA1A-249ENST00000637777 GAGE12FP0CL80 117 aa10.22□□□□□ -0.77
CACNA1A-249ENST00000637777 GAGE12GP0CL81 117 aa10.22□□□□□ -0.77
CACNA1A-249ENST00000637777 GAGE12IP0CL82 117 aa10.22□□□□□ -0.77
CACNA1A-249ENST00000637777 FGF8P55075 233 aaPredicted RBP10.22□□□□□ -0.77
CACNA1A-249ENST00000637777 ZNF345Q14585 488 aa10.22□□□□□ -0.77
CACNA1A-249ENST00000637777 TMEM88Q6PEY1 159 aa10.22□□□□□ -0.77
CACNA1A-249ENST00000637777 KCNRGQ8N5I3 272 aa10.22□□□□□ -0.77
CACNA1A-249ENST00000637777 ZFAND2AQ8N6M9 145 aa10.22□□□□□ -0.77
CACNA1A-249ENST00000637777 FAM210BQ96KR6 192 aa10.22□□□□□ -0.77
CACNA1A-249ENST00000637777 NDFIP1Q9BT67 221 aa10.22□□□□□ -0.77
CACNA1A-249ENST00000637777 IGHV1OR15-1A0A075B7D0 117 aa10.21□□□□□ -0.77
CACNA1A-249ENST00000637777 A0A0D9SG52 128 aa10.21□□□□□ -0.77
CACNA1A-249ENST00000637777 IFNA7P01567 189 aa10.21□□□□□ -0.77
CACNA1A-249ENST00000637777 P0DMU3 169 aa10.21□□□□□ -0.77
CACNA1A-249ENST00000637777 FAM231AP0DMU4 169 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms