RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 LEPP41159 167 aa11.99□□□□□ -0.49
CLN6-212ENST00000636020 TCL1AP56279 114 aa11.99□□□□□ -0.49
CLN6-212ENST00000636020 RAP2BP61225 183 aa11.99□□□□□ -0.49
CLN6-212ENST00000636020 VGLL1Q99990 258 aa11.99□□□□□ -0.49
CLN6-212ENST00000636020 Q9HAA7 133 aa11.99□□□□□ -0.49
CLN6-212ENST00000636020 E5RGE8 158 aa11.98□□□□□ -0.49
CLN6-212ENST00000636020 VAMP1P23763 118 aa11.98□□□□□ -0.49
CLN6-212ENST00000636020 ASIPP42127 132 aa11.98□□□□□ -0.49
CLN6-212ENST00000636020 RRAS2P62070 204 aaPredicted RBP11.98□□□□□ -0.49
CLN6-212ENST00000636020 ZNF415Q09FC8 603 aa11.98□□□□□ -0.49
CLN6-212ENST00000636020 ANXA2RQ3ZCQ2 193 aa11.98□□□□□ -0.49
CLN6-212ENST00000636020 TEPPQ6URK8 271 aa11.98□□□□□ -0.49
CLN6-212ENST00000636020 CIRBP-AS1Q8TBR5 109 aa11.98□□□□□ -0.49
CLN6-212ENST00000636020 MITD1Q8WV92 249 aa11.98□□□□□ -0.49
CLN6-212ENST00000636020 ODF3Q96PU9 254 aa11.98□□□□□ -0.49
CLN6-212ENST00000636020 PRR13Q9NZ81 148 aa11.98□□□□□ -0.49
CLN6-212ENST00000636020 PAIP2BQ9ULR5 123 aaKnown RBP11.98□□□□□ -0.49
CLN6-212ENST00000636020 A0A0B4J2A0 478 aa11.97□□□□□ -0.49
CLN6-212ENST00000636020 IGHV3-38A0A0C4DH36 116 aa11.97□□□□□ -0.49
CLN6-212ENST00000636020 PMS2P5A8MQ11 134 aa11.97□□□□□ -0.49
CLN6-212ENST00000636020 HYPMO75409 117 aa11.97□□□□□ -0.49
CLN6-212ENST00000636020 CXCL2P19875 107 aa11.97□□□□□ -0.49
CLN6-212ENST00000636020 HNRNPA3P51991 378 aaKnown RBP11.97□□□□□ -0.49
CLN6-212ENST00000636020 LINC01620Q4KN68 170 aa11.97□□□□□ -0.49
CLN6-212ENST00000636020 ACOT7LQ6ZUV0 252 aa11.97□□□□□ -0.49
CLN6-212ENST00000636020 C12orf45Q8N5I9 185 aaPredicted RBP11.97□□□□□ -0.49
CLN6-212ENST00000636020 ZBTB8BQ8NAP8 495 aaPredicted RBP11.97□□□□□ -0.49
CLN6-212ENST00000636020 MRPL16Q9NX20 251 aaKnown RBP11.97□□□□□ -0.49
CLN6-212ENST00000636020 SHPKQ9UHJ6 478 aa11.97□□□□□ -0.49
CLN6-212ENST00000636020 IAPPP10997 89 aa11.96□□□□□ -0.49
CLN6-212ENST00000636020 GYPEP15421 78 aa11.96□□□□□ -0.49
CLN6-212ENST00000636020 PLP1P60201 277 aa11.96□□□□□ -0.49
CLN6-212ENST00000636020 LINC01556Q5JQF7 62 aa11.96□□□□□ -0.49
CLN6-212ENST00000636020 LCN15Q6UWW0 184 aa11.96□□□□□ -0.49
CLN6-212ENST00000636020 LYZL2Q7Z4W2 148 aa11.96□□□□□ -0.49
CLN6-212ENST00000636020 EIF4E3Q8N5X7 224 aaKnown RBP11.96□□□□□ -0.49
CLN6-212ENST00000636020 SLC50A1Q9BRV3 221 aa11.96□□□□□ -0.49
CLN6-212ENST00000636020 MED28Q9H204 178 aa11.96□□□□□ -0.49
CLN6-212ENST00000636020 SSNA1O43805 119 aa11.95□□□□□ -0.5
CLN6-212ENST00000636020 OR5G3P0C626 314 aa11.95□□□□□ -0.5
CLN6-212ENST00000636020 CYP2G1PQ6ZSU1 146 aa11.95□□□□□ -0.5
CLN6-212ENST00000636020 DAZAP1Q96EP5 407 aaKnown RBP11.95□□□□□ -0.5
CLN6-212ENST00000636020 KCNIP3Q9Y2W7 256 aa11.95□□□□□ -0.5
CLN6-212ENST00000636020 C7orf71A4D174 169 aa11.94□□□□□ -0.5
CLN6-212ENST00000636020 IGLV2-8P01709 118 aa11.94□□□□□ -0.5
CLN6-212ENST00000636020 SLC25A5P05141 298 aaKnown RBP11.94□□□□□ -0.5
CLN6-212ENST00000636020 SNRPCP09234 159 aaKnown RBP11.94□□□□□ -0.5
CLN6-212ENST00000636020 ANXA3P12429 323 aa11.94□□□□□ -0.5
CLN6-212ENST00000636020 AKR1C1Q04828 323 aa11.94□□□□□ -0.5
CLN6-212ENST00000636020 IBA57Q5T440 356 aaKnown RBP11.94□□□□□ -0.5
CLN6-212ENST00000636020 IQCF2Q8IXL9 164 aa11.94□□□□□ -0.5
CLN6-212ENST00000636020 PCNPQ8WW12 178 aaKnown RBP11.94□□□□□ -0.5
CLN6-212ENST00000636020 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.93□□□□□ -0.5
CLN6-212ENST00000636020 TRGV4A0A0C4DH28 118 aa11.93□□□□□ -0.5
CLN6-212ENST00000636020 TXNDC17Q9BRA2 123 aa11.93□□□□□ -0.5
CLN6-212ENST00000636020 MGAT4CQ9UBM8 478 aa11.93□□□□□ -0.5
CLN6-212ENST00000636020 SLC17A3O00476 420 aa11.92□□□□□ -0.5
CLN6-212ENST00000636020 PITX3O75364 302 aa11.92□□□□□ -0.5
CLN6-212ENST00000636020 ORM1P02763 201 aa11.92□□□□□ -0.5
CLN6-212ENST00000636020 LINC00869P0C866 280 aa11.92□□□□□ -0.5
CLN6-212ENST00000636020 ACOT6Q3I5F7 207 aaPredicted RBP11.92□□□□□ -0.5
CLN6-212ENST00000636020 TDRG1Q3Y452 100 aa11.92□□□□□ -0.5
CLN6-212ENST00000636020 MORN5Q5VZ52 161 aa11.92□□□□□ -0.5
CLN6-212ENST00000636020 PATE2Q6UY27 113 aa11.92□□□□□ -0.5
CLN6-212ENST00000636020 S100A7AQ86SG5 101 aa11.92□□□□□ -0.5
CLN6-212ENST00000636020 BLNKQ8WV28 456 aa11.92□□□□□ -0.5
CLN6-212ENST00000636020 DNAJC4Q9NNZ3 241 aa11.92□□□□□ -0.5
CLN6-212ENST00000636020 GOSR2O14653 212 aa11.91□□□□□ -0.5
CLN6-212ENST00000636020 TIRAPP58753 221 aa11.91□□□□□ -0.5
CLN6-212ENST00000636020 RPL37AP61513 92 aaKnown RBP11.91□□□□□ -0.5
CLN6-212ENST00000636020 SRPXP78539 464 aa11.91□□□□□ -0.5
CLN6-212ENST00000636020 CD300CQ08708 224 aa11.91□□□□□ -0.5
CLN6-212ENST00000636020 TM2D2Q9BX73 214 aa11.91□□□□□ -0.5
CLN6-212ENST00000636020 TP53TG3Q9ULZ0 132 aa11.91□□□□□ -0.5
CLN6-212ENST00000636020 KLLNB2CW77 178 aa11.9□□□□□ -0.5
CLN6-212ENST00000636020 H3BTX0 84 aa11.9□□□□□ -0.5
CLN6-212ENST00000636020 CCSO14618 274 aa11.9□□□□□ -0.5
CLN6-212ENST00000636020 LECT2O14960 151 aa11.9□□□□□ -0.5
CLN6-212ENST00000636020 SFTA3P0C7M3 94 aa11.9□□□□□ -0.5
CLN6-212ENST00000636020 AKAP14Q86UN6 197 aa11.9□□□□□ -0.5
CLN6-212ENST00000636020 ZNF479Q96JC4 524 aa11.9□□□□□ -0.5
CLN6-212ENST00000636020 RNF24Q9Y225 148 aa11.9□□□□□ -0.5
CLN6-212ENST00000636020 DUXBA0A1W2PPF3 345 aa11.89□□□□□ -0.51
CLN6-212ENST00000636020 MPDU1O75352 247 aa11.89□□□□□ -0.51
CLN6-212ENST00000636020 H2BFSP57053 126 aa11.89□□□□□ -0.51
CLN6-212ENST00000636020 RPP30P78346 268 aaKnown RBP11.89□□□□□ -0.51
CLN6-212ENST00000636020 BTN1A1Q13410 526 aa11.89□□□□□ -0.51
CLN6-212ENST00000636020 SAT2Q96F10 170 aaPredicted RBP11.89□□□□□ -0.51
CLN6-212ENST00000636020 PXMP4Q9Y6I8 212 aa11.89□□□□□ -0.51
CLN6-212ENST00000636020 PFDN1O60925 122 aa11.88□□□□□ -0.51
CLN6-212ENST00000636020 CCNKO75909 580 aa11.88□□□□□ -0.51
CLN6-212ENST00000636020 SIX6O95475 246 aa11.88□□□□□ -0.51
CLN6-212ENST00000636020 HOXB5P09067 269 aa11.88□□□□□ -0.51
CLN6-212ENST00000636020 SELENOTP62341 195 aa11.88□□□□□ -0.51
CLN6-212ENST00000636020 CIB3Q96Q77 187 aaPredicted RBP11.88□□□□□ -0.51
CLN6-212ENST00000636020 ARL6Q9H0F7 186 aa11.88□□□□□ -0.51
CLN6-212ENST00000636020 ARV1Q9H2C2 271 aa11.88□□□□□ -0.51
CLN6-212ENST00000636020 C9JCJ5 164 aa11.87□□□□□ -0.51
CLN6-212ENST00000636020 MED6O75586 246 aa11.87□□□□□ -0.51
CLN6-212ENST00000636020 IGLV2-11P01706 119 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms