RNA–Protein interactions for RNA: ENST00000635917.1

CACNA1A-219, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,832 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-219ENST00000635917 TM4SF20Q53R12 229 aa9.52□□□□□ -0.89
CACNA1A-219ENST00000635917 GDF5OSQ5U4N7 250 aa9.52□□□□□ -0.89
CACNA1A-219ENST00000635917 MRPL54Q6P161 138 aaKnown RBP9.52□□□□□ -0.89
CACNA1A-219ENST00000635917 ZNF575Q86XF7 245 aa9.52□□□□□ -0.89
CACNA1A-219ENST00000635917 UBE2E2Q96LR5 201 aa9.52□□□□□ -0.89
CACNA1A-219ENST00000635917 MRPL18Q9H0U6 180 aaKnown RBP9.52□□□□□ -0.89
CACNA1A-219ENST00000635917 MT-ND6P03923 174 aa9.51□□□□□ -0.89
CACNA1A-219ENST00000635917 EDN2P20800 178 aa9.51□□□□□ -0.89
CACNA1A-219ENST00000635917 TCF24Q7RTU0 167 aa9.51□□□□□ -0.89
CACNA1A-219ENST00000635917 ATP5L2Q7Z4Y8 100 aa9.51□□□□□ -0.89
CACNA1A-219ENST00000635917 Q8TAT8 98 aa9.51□□□□□ -0.89
CACNA1A-219ENST00000635917 GPR61Q9BZJ8 451 aa9.51□□□□□ -0.89
CACNA1A-219ENST00000635917 ESM1Q9NQ30 184 aa9.51□□□□□ -0.89
CACNA1A-219ENST00000635917 SMPXQ9UHP9 88 aa9.51□□□□□ -0.89
CACNA1A-219ENST00000635917 A0A1W2PS18 150 aa9.5□□□□□ -0.89
CACNA1A-219ENST00000635917 S100A8P05109 93 aa9.5□□□□□ -0.89
CACNA1A-219ENST00000635917 LGALS1P09382 135 aaKnown RBP9.5□□□□□ -0.89
CACNA1A-219ENST00000635917 RPL19P84098 196 aaKnown RBP9.5□□□□□ -0.89
CACNA1A-219ENST00000635917 SAPCD1Q5SSQ6 148 aa9.5□□□□□ -0.89
CACNA1A-219ENST00000635917 WDR73Q6P4I2 378 aa9.5□□□□□ -0.89
CACNA1A-219ENST00000635917 LINC00528Q8N1L1 170 aa9.5□□□□□ -0.89
CACNA1A-219ENST00000635917 DAZAP1Q96EP5 407 aaKnown RBP9.5□□□□□ -0.89
CACNA1A-219ENST00000635917 RHPN1-AS1Q9BWJ2 59 aa9.5□□□□□ -0.89
CACNA1A-219ENST00000635917 PPP1R14DQ9NXH3 145 aa9.5□□□□□ -0.89
CACNA1A-219ENST00000635917 CLEC5AQ9NY25 188 aa9.5□□□□□ -0.89
CACNA1A-219ENST00000635917 TP53TG3Q9ULZ0 132 aa9.5□□□□□ -0.89
CACNA1A-219ENST00000635917 XKRY2A2RUG3 117 aa9.49□□□□□ -0.89
CACNA1A-219ENST00000635917 DNAJC9-AS1A6NH13 148 aa9.49□□□□□ -0.89
CACNA1A-219ENST00000635917 ZNF80P51504 273 aaPredicted RBP9.49□□□□□ -0.89
CACNA1A-219ENST00000635917 FAM106AQ4KMX7 169 aa9.49□□□□□ -0.89
CACNA1A-219ENST00000635917 OR2D3Q8NGH3 330 aa9.49□□□□□ -0.89
CACNA1A-219ENST00000635917 C20orf173Q96LM9 149 aa9.49□□□□□ -0.89
CACNA1A-219ENST00000635917 TMEM213A2RRL7 107 aa9.49□□□□□ -0.89
CACNA1A-219ENST00000635917 A8MWP6 167 aa9.49□□□□□ -0.89
CACNA1A-219ENST00000635917 HLA-DQA1P01909 254 aa9.49□□□□□ -0.89
CACNA1A-219ENST00000635917 GZMBP10144 247 aa9.49□□□□□ -0.89
CACNA1A-219ENST00000635917 ERCC8Q13216 396 aa9.49□□□□□ -0.89
CACNA1A-219ENST00000635917 TCTEX1D4Q5JR98 221 aa9.49□□□□□ -0.89
CACNA1A-219ENST00000635917 RBPMS2Q6ZRY4 209 aaKnown RBP9.49□□□□□ -0.89
CACNA1A-219ENST00000635917 C9orf47Q6ZRZ4 202 aa9.49□□□□□ -0.89
CACNA1A-219ENST00000635917 Q6ZSV7 163 aa9.49□□□□□ -0.89
CACNA1A-219ENST00000635917 AGPAT4-IT1Q9H0P7 198 aa9.49□□□□□ -0.89
CACNA1A-219ENST00000635917 FAM181BA6NEQ2 426 aa9.48□□□□□ -0.89
CACNA1A-219ENST00000635917 SH2D1AO60880 128 aa9.48□□□□□ -0.89
CACNA1A-219ENST00000635917 LINC00310P59036 64 aa9.48□□□□□ -0.89
CACNA1A-219ENST00000635917 SLAQ13239 276 aa9.48□□□□□ -0.89
CACNA1A-219ENST00000635917 REC114Q7Z4M0 266 aa9.48□□□□□ -0.89
CACNA1A-219ENST00000635917 NRN1Q9NPD7 142 aa9.48□□□□□ -0.89
CACNA1A-219ENST00000635917 SORL1Q92673 2214 aa9.48□□□□□ -0.89
CACNA1A-219ENST00000635917 IGHV4OR15-8A0A075B7B6 117 aa9.47□□□□□ -0.89
CACNA1A-219ENST00000635917 A0A087WW49 117 aa9.47□□□□□ -0.89
CACNA1A-219ENST00000635917 A0A1B0GUS0 222 aa9.47□□□□□ -0.89
CACNA1A-219ENST00000635917 LGALS9O00182 355 aa9.47□□□□□ -0.89
CACNA1A-219ENST00000635917 FAM162BQ5T6X4 162 aa9.47□□□□□ -0.89
CACNA1A-219ENST00000635917 KLHDC1Q8N7A1 406 aa9.47□□□□□ -0.89
CACNA1A-219ENST00000635917 C16orf92Q96LL3 132 aa9.47□□□□□ -0.89
CACNA1A-219ENST00000635917 HIST1H2BLQ99880 126 aa9.47□□□□□ -0.89
CACNA1A-219ENST00000635917 HIVEP2P31629 2446 aa9.47□□□□□ -0.89
CACNA1A-219ENST00000635917 CT45A10P0DMU9 189 aa9.47□□□□□ -0.89
CACNA1A-219ENST00000635917 PDZD11Q5EBL8 140 aa9.47□□□□□ -0.89
CACNA1A-219ENST00000635917 PGLYRP4Q96LB8 373 aa9.47□□□□□ -0.89
CACNA1A-219ENST00000635917 UFC1Q9Y3C8 167 aa9.47□□□□□ -0.89
CACNA1A-219ENST00000635917 SETD2Q9BYW2 2564 aaPredicted RBP9.46□□□□□ -0.89
CACNA1A-219ENST00000635917 GRIFINA4D1Z8 144 aa9.46□□□□□ -0.9
CACNA1A-219ENST00000635917 NUPR1O60356 82 aa9.46□□□□□ -0.9
CACNA1A-219ENST00000635917 AMBPP02760 352 aa9.46□□□□□ -0.9
CACNA1A-219ENST00000635917 SRSF2Q01130 221 aaKnown RBP9.46□□□□□ -0.9
CACNA1A-219ENST00000635917 Q0VG73 95 aa9.46□□□□□ -0.9
CACNA1A-219ENST00000635917 C18orf65Q6ZTR6 163 aa9.46□□□□□ -0.9
CACNA1A-219ENST00000635917 TMEM256Q8N2U0 113 aa9.46□□□□□ -0.9
CACNA1A-219ENST00000635917 DCANP1Q8TF63 244 aa9.46□□□□□ -0.9
CACNA1A-219ENST00000635917 YAE1D1Q9NRH1 226 aa9.46□□□□□ -0.9
CACNA1A-219ENST00000635917 TMEM160Q9NX00 188 aa9.46□□□□□ -0.9
CACNA1A-219ENST00000635917 SMIM6P0DI80 62 aa9.45□□□□□ -0.9
CACNA1A-219ENST00000635917 ESDP10768 282 aa9.45□□□□□ -0.9
CACNA1A-219ENST00000635917 HBBP68871 147 aa9.45□□□□□ -0.9
CACNA1A-219ENST00000635917 GATD1Q8NB37 220 aa9.45□□□□□ -0.9
CACNA1A-219ENST00000635917 C12orf57Q99622 126 aa9.45□□□□□ -0.9
CACNA1A-219ENST00000635917 CRISP2P16562 243 aa9.45□□□□□ -0.9
CACNA1A-219ENST00000635917 HOXD3P31249 432 aaPredicted RBP9.45□□□□□ -0.9
CACNA1A-219ENST00000635917 ZNF138P52744 262 aa9.45□□□□□ -0.9
CACNA1A-219ENST00000635917 KLF5Q13887 457 aaPredicted RBP9.45□□□□□ -0.9
CACNA1A-219ENST00000635917 KIAA1644Q3SXP7 199 aa9.45□□□□□ -0.9
CACNA1A-219ENST00000635917 LENEPQ9Y5L5 61 aa9.45□□□□□ -0.9
CACNA1A-219ENST00000635917 F2Z2F3 143 aa9.44□□□□□ -0.9
CACNA1A-219ENST00000635917 APCSP02743 223 aa9.44□□□□□ -0.9
CACNA1A-219ENST00000635917 FABP4P15090 132 aa9.44□□□□□ -0.9
CACNA1A-219ENST00000635917 BMI1P35226 326 aa9.44□□□□□ -0.9
CACNA1A-219ENST00000635917 SYNJ2BPP57105 145 aa9.44□□□□□ -0.9
CACNA1A-219ENST00000635917 RAB4BP61018 213 aa9.44□□□□□ -0.9
CACNA1A-219ENST00000635917 PYY3Q5JQD4 70 aa9.44□□□□□ -0.9
CACNA1A-219ENST00000635917 ADAMTSL5Q6ZMM2 481 aa9.44□□□□□ -0.9
CACNA1A-219ENST00000635917 NDFIP1Q9BT67 221 aa9.44□□□□□ -0.9
CACNA1A-219ENST00000635917 SSBP4Q9BWG4 385 aaPredicted RBP9.44□□□□□ -0.9
CACNA1A-219ENST00000635917 FABP5P3A8MUU1 101 aa9.43□□□□□ -0.9
CACNA1A-219ENST00000635917 ARMS2P0C7Q2 107 aa9.43□□□□□ -0.9
CACNA1A-219ENST00000635917 IGLC6P0CF74 106 aa9.43□□□□□ -0.9
CACNA1A-219ENST00000635917 CAMPP49913 170 aa9.43□□□□□ -0.9
CACNA1A-219ENST00000635917 OR10J3Q5JRS4 329 aa9.43□□□□□ -0.9
CACNA1A-219ENST00000635917 TMEM78Q5T7P6 136 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms