RNA–Protein interactions for RNA: ENST00000627000.1

CHRNA4-209, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNA4, Length 2,192 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-209ENST00000627000 PRR25Q96S07 402 aa15.04■□□□□ -0
CHRNA4-209ENST00000627000 C9orf139Q6ZV77 190 aa15.04■□□□□ -0
CHRNA4-209ENST00000627000 BAGE3Q86Y29 109 aa15.04■□□□□ -0
CHRNA4-209ENST00000627000 VPREB3Q9UKI3 123 aa15.04■□□□□ -0
CHRNA4-209ENST00000627000 TEX15Q9BXT5 2789 aa15.03■□□□□ -0
CHRNA4-209ENST00000627000 SCGB1D1O95968 90 aa15.03■□□□□ -0
CHRNA4-209ENST00000627000 CT45A10P0DMU9 189 aa15.03■□□□□ -0
CHRNA4-209ENST00000627000 Q0VG73 95 aa15.03■□□□□ -0
CHRNA4-209ENST00000627000 C8orf86Q6ZUL3 223 aa15.03■□□□□ -0
CHRNA4-209ENST00000627000 GLMPQ8WWB7 406 aa15.03■□□□□ -0
CHRNA4-209ENST00000627000 SLC50A1Q9BRV3 221 aa15.03■□□□□ -0
CHRNA4-209ENST00000627000 CREBBPQ92793 2442 aa15.03■□□□□ -0
CHRNA4-209ENST00000627000 A0A0G2JLM5 398 aa15.02■□□□□ -0
CHRNA4-209ENST00000627000 HOXA3O43365 443 aaPredicted RBP15.02□□□□□ -0.01
CHRNA4-209ENST00000627000 HBBP68871 147 aa15.02□□□□□ -0.01
CHRNA4-209ENST00000627000 CYB5R2Q6BCY4 276 aa15.02□□□□□ -0.01
CHRNA4-209ENST00000627000 PRSS57Q6UWY2 283 aa15.02□□□□□ -0.01
CHRNA4-209ENST00000627000 WFDC11Q8NEX6 87 aa15.02□□□□□ -0.01
CHRNA4-209ENST00000627000 ZNF580Q9UK33 172 aa15.02□□□□□ -0.01
CHRNA4-209ENST00000627000 FAM231BA6NCW3 169 aa15.01□□□□□ -0.01
CHRNA4-209ENST00000627000 SH2D1AO60880 128 aa15.01□□□□□ -0.01
CHRNA4-209ENST00000627000 RAB4AP20338 218 aa15.01□□□□□ -0.01
CHRNA4-209ENST00000627000 PSMB8P28062 276 aa15.01□□□□□ -0.01
CHRNA4-209ENST00000627000 ZNF80P51504 273 aaPredicted RBP15.01□□□□□ -0.01
CHRNA4-209ENST00000627000 NAGKQ9UJ70 344 aa15.01□□□□□ -0.01
CHRNA4-209ENST00000627000 J3QKU1 62 aa15.01□□□□□ -0.01
CHRNA4-209ENST00000627000 SAPCD1Q5SSQ6 148 aa15.01□□□□□ -0.01
CHRNA4-209ENST00000627000 MXRA5Q9NR99 2828 aa15.01□□□□□ -0.01
CHRNA4-209ENST00000627000 TMSB15BA0A087X1C1 80 aa15□□□□□ -0.01
CHRNA4-209ENST00000627000 KIR2DL5BA0A0G2JN68 375 aa15□□□□□ -0.01
CHRNA4-209ENST00000627000 KIR2DL5BA0A0G2JPC4 375 aa15□□□□□ -0.01
CHRNA4-209ENST00000627000 COX8CQ7Z4L0 72 aa15□□□□□ -0.01
CHRNA4-209ENST00000627000 KIR2DL5AQ8N109 375 aa15□□□□□ -0.01
CHRNA4-209ENST00000627000 RCHY1Q96PM5 261 aa15□□□□□ -0.01
CHRNA4-209ENST00000627000 PSMG3-AS1Q96PY0 264 aa15□□□□□ -0.01
CHRNA4-209ENST00000627000 NPFFR1Q9GZQ6 430 aa15□□□□□ -0.01
CHRNA4-209ENST00000627000 FOXA3P55318 350 aaPredicted RBP15□□□□□ -0.01
CHRNA4-209ENST00000627000 SELENOKQ9Y6D0 94 aa15□□□□□ -0.01
CHRNA4-209ENST00000627000 PAFAH1B2P68402 229 aa14.99□□□□□ -0.01
CHRNA4-209ENST00000627000 FAM162BQ5T6X4 162 aa14.99□□□□□ -0.01
CHRNA4-209ENST00000627000 IL17RELQ6ZVW7 336 aa14.99□□□□□ -0.01
CHRNA4-209ENST00000627000 DUX5Q96PT3 197 aa14.99□□□□□ -0.01
CHRNA4-209ENST00000627000 FBLL1A6NHQ2 334 aaKnown RBP14.98□□□□□ -0.01
CHRNA4-209ENST00000627000 EREGO14944 169 aa14.98□□□□□ -0.01
CHRNA4-209ENST00000627000 ESDP10768 282 aa14.98□□□□□ -0.01
CHRNA4-209ENST00000627000 EDN2P20800 178 aa14.98□□□□□ -0.01
CHRNA4-209ENST00000627000 TM4SF20Q53R12 229 aa14.98□□□□□ -0.01
CHRNA4-209ENST00000627000 OR10J3Q5JRS4 329 aa14.98□□□□□ -0.01
CHRNA4-209ENST00000627000 GPHB5Q86YW7 130 aa14.98□□□□□ -0.01
CHRNA4-209ENST00000627000 ARMS2P0C7Q2 107 aa14.98□□□□□ -0.01
CHRNA4-209ENST00000627000 ZNF702PQ9H963 129 aa14.98□□□□□ -0.01
CHRNA4-209ENST00000627000 PEF1Q9UBV8 284 aaKnown RBP14.98□□□□□ -0.01
CHRNA4-209ENST00000627000 C16orf92Q96LL3 132 aa14.97□□□□□ -0.01
CHRNA4-209ENST00000627000 TPPP3Q9BW30 176 aa14.97□□□□□ -0.01
CHRNA4-209ENST00000627000 AGPAT4-IT1Q9H0P7 198 aa14.97□□□□□ -0.01
CHRNA4-209ENST00000627000 TMEM189A5PLL7 270 aa14.97□□□□□ -0.01
CHRNA4-209ENST00000627000 RPLP1P05386 114 aaKnown RBP14.97□□□□□ -0.01
CHRNA4-209ENST00000627000 C18orf32Q8TCD1 76 aa14.97□□□□□ -0.01
CHRNA4-209ENST00000627000 C20orf173Q96LM9 149 aa14.97□□□□□ -0.01
CHRNA4-209ENST00000627000 SNHG12Q9BXW3 62 aa14.97□□□□□ -0.01
CHRNA4-209ENST00000627000 ITPR3Q14573 2671 aa14.97□□□□□ -0.01
CHRNA4-209ENST00000627000 RBAKDNA6NC62 111 aa14.96□□□□□ -0.01
CHRNA4-209ENST00000627000 HAX1O00165 279 aa14.96□□□□□ -0.01
CHRNA4-209ENST00000627000 ZNF705DP0CH99 300 aaPredicted RBP14.96□□□□□ -0.01
CHRNA4-209ENST00000627000 ZNF705BP0CI00 300 aaPredicted RBP14.96□□□□□ -0.01
CHRNA4-209ENST00000627000 ALKBH7Q9BT30 221 aaPredicted RBP14.96□□□□□ -0.01
CHRNA4-209ENST00000627000 A0A1B0GUT8 65 aa14.95□□□□□ -0.02
CHRNA4-209ENST00000627000 CD33P20138 364 aa14.95□□□□□ -0.02
CHRNA4-209ENST00000627000 NDFIP1Q9BT67 221 aa14.95□□□□□ -0.02
CHRNA4-209ENST00000627000 PPP1R14DQ9NXH3 145 aa14.95□□□□□ -0.02
CHRNA4-209ENST00000627000 IGHV7-4-1A0A0J9YVY3 117 aa14.94□□□□□ -0.02
CHRNA4-209ENST00000627000 MRPL53Q96EL3 112 aaKnown RBP14.94□□□□□ -0.02
CHRNA4-209ENST00000627000 RHPN1-AS1Q9BWJ2 59 aa14.94□□□□□ -0.02
CHRNA4-209ENST00000627000 IGKV3-7A0A075B6H7 116 aa14.94□□□□□ -0.02
CHRNA4-209ENST00000627000 ZNF575Q86XF7 245 aa14.94□□□□□ -0.02
CHRNA4-209ENST00000627000 SIGLECL1Q8N7X8 197 aa14.94□□□□□ -0.02
CHRNA4-209ENST00000627000 A0A1W2PS18 150 aa14.93□□□□□ -0.02
CHRNA4-209ENST00000627000 RPL11P62913 178 aaKnown RBP14.93□□□□□ -0.02
CHRNA4-209ENST00000627000 SAMD10Q9BYL1 202 aa14.93□□□□□ -0.02
CHRNA4-209ENST00000627000 DAZ1Q9NQZ3 744 aaKnown RBP14.93□□□□□ -0.02
CHRNA4-209ENST00000627000 SOCS3O14543 225 aa14.92□□□□□ -0.02
CHRNA4-209ENST00000627000 BMI1P35226 326 aa14.92□□□□□ -0.02
CHRNA4-209ENST00000627000 LYZL1Q6UWQ5 148 aa14.92□□□□□ -0.02
CHRNA4-209ENST00000627000 Q6ZWC4 215 aa14.92□□□□□ -0.02
CHRNA4-209ENST00000627000 KCNS1Q96KK3 526 aa14.92□□□□□ -0.02
CHRNA4-209ENST00000627000 C20orf144Q9BQM9 153 aa14.92□□□□□ -0.02
CHRNA4-209ENST00000627000 TLN2Q9Y4G6 2542 aa14.92□□□□□ -0.02
CHRNA4-209ENST00000627000 MUC21A0A0G2JKD1 596 aa14.92□□□□□ -0.02
CHRNA4-209ENST00000627000 MUC21A0A140T8X8 626 aa14.92□□□□□ -0.02
CHRNA4-209ENST00000627000 TMEM89A2RUT3 159 aa14.92□□□□□ -0.02
CHRNA4-209ENST00000627000 DEFB1P60022 68 aa14.92□□□□□ -0.02
CHRNA4-209ENST00000627000 MUC21Q5SSG8 566 aa14.92□□□□□ -0.02
CHRNA4-209ENST00000627000 CCDC168Q8NDH2 2452 aa14.92□□□□□ -0.02
CHRNA4-209ENST00000627000 ZNF138P52744 262 aa14.91□□□□□ -0.02
CHRNA4-209ENST00000627000 RIGQ13278 110 aa14.91□□□□□ -0.02
CHRNA4-209ENST00000627000 KLF5Q13887 457 aaPredicted RBP14.91□□□□□ -0.02
CHRNA4-209ENST00000627000 TMEM78Q5T7P6 136 aa14.91□□□□□ -0.02
CHRNA4-209ENST00000627000 ZNF738Q8NE65 137 aa14.91□□□□□ -0.02
CHRNA4-209ENST00000627000 SMPXQ9UHP9 88 aa14.91□□□□□ -0.02
CHRNA4-209ENST00000627000 GPX1P07203 203 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms