RNA–Protein interactions for RNA: ENST00000622972.3

LINC00963-215, long intergenic non-protein coding RNA 963, human

TSL 5

Gene LINC00963, Length 444 nt, Biotype lincRNA, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC00963-215	ENST00000622972	CRX	O43186	299 aa	Predicted RBP	4.23	□□□□□ -1.73
LINC00963-215	ENST00000622972	IGKV3-20	P01619	116 aa		4.23	□□□□□ -1.73
LINC00963-215	ENST00000622972	HIST1H1E	P10412	219 aa	Known RBP	4.23	□□□□□ -1.73
LINC00963-215	ENST00000622972	HLA-DRB4	P13762	266 aa		4.23	□□□□□ -1.73
LINC00963-215	ENST00000622972	MIF	P14174	115 aa		4.23	□□□□□ -1.73
LINC00963-215	ENST00000622972	RPL7	P18124	248 aa	Known RBP	4.23	□□□□□ -1.73
LINC00963-215	ENST00000622972	NUP62	P37198	522 aa	Predicted RBP	4.23	□□□□□ -1.73
LINC00963-215	ENST00000622972	GALR1	P47211	349 aa		4.23	□□□□□ -1.73
LINC00963-215	ENST00000622972	CDC34	P49427	236 aa	Predicted RBP	4.23	□□□□□ -1.73
LINC00963-215	ENST00000622972	TCTA	P57738	103 aa		4.23	□□□□□ -1.73
LINC00963-215	ENST00000622972	FXYD7	P58549	80 aa		4.23	□□□□□ -1.73
LINC00963-215	ENST00000622972	CCL20	P78556	96 aa		4.23	□□□□□ -1.73
LINC00963-215	ENST00000622972	RAB31	Q13636	194 aa		4.23	□□□□□ -1.73
LINC00963-215	ENST00000622972	PRR9	Q5T870	116 aa		4.23	□□□□□ -1.73
LINC00963-215	ENST00000622972		Q6ZRG5	221 aa		4.23	□□□□□ -1.73
LINC00963-215	ENST00000622972	OR1L4	Q8NGR5	311 aa		4.23	□□□□□ -1.73
LINC00963-215	ENST00000622972	BLNK	Q8WV28	456 aa		4.23	□□□□□ -1.73
LINC00963-215	ENST00000622972	HYLS1	Q96M11	299 aa		4.23	□□□□□ -1.73
LINC00963-215	ENST00000622972	LINC00052	Q96N35	136 aa		4.23	□□□□□ -1.73
LINC00963-215	ENST00000622972	C1QTNF4	Q9BXJ3	329 aa		4.23	□□□□□ -1.73
LINC00963-215	ENST00000622972	SLC35B3	Q9H1N7	401 aa		4.23	□□□□□ -1.73
LINC00963-215	ENST00000622972	OR51M1	Q9H341	326 aa		4.23	□□□□□ -1.73
LINC00963-215	ENST00000622972	SAV1	Q9H4B6	383 aa	Predicted RBP	4.23	□□□□□ -1.73
LINC00963-215	ENST00000622972	XCL2	Q9UBD3	114 aa		4.23	□□□□□ -1.73
LINC00963-215	ENST00000622972	YTHDF2	Q9Y5A9	579 aa	Known RBP	4.23	□□□□□ -1.73
LINC00963-215	ENST00000622972	HLA-DRB4	X5D2U9	266 aa		4.23	□□□□□ -1.73
LINC00963-215	ENST00000622972	NACA	E9PAV3	2078 aa		4.22	□□□□□ -1.73
LINC00963-215	ENST00000622972	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	4.22	□□□□□ -1.73
LINC00963-215	ENST00000622972	BORCS7-ASMT	A0A0B4J1R7	106 aa		4.22	□□□□□ -1.73
LINC00963-215	ENST00000622972	KANTR	A0A1W2PQU2	76 aa		4.22	□□□□□ -1.73
LINC00963-215	ENST00000622972	OR7C2	O60412	319 aa		4.22	□□□□□ -1.73
LINC00963-215	ENST00000622972	IGKV2D-40	P01614	121 aa	Predicted RBP	4.22	□□□□□ -1.73
LINC00963-215	ENST00000622972	PRM2	P04554	102 aa		4.22	□□□□□ -1.73
LINC00963-215	ENST00000622972	NBEAP1	P0C6P0	100 aa		4.22	□□□□□ -1.73
LINC00963-215	ENST00000622972	SEC11B	P0C7V7	166 aa		4.22	□□□□□ -1.73
LINC00963-215	ENST00000622972	GCHFR	P30047	84 aa		4.22	□□□□□ -1.73
LINC00963-215	ENST00000622972	ID1	P41134	155 aa		4.22	□□□□□ -1.73
LINC00963-215	ENST00000622972	CNN1	P51911	297 aa	Known RBP	4.22	□□□□□ -1.73
LINC00963-215	ENST00000622972	EMP1	P54849	157 aa		4.22	□□□□□ -1.73
LINC00963-215	ENST00000622972	RHOB	P62745	196 aa		4.22	□□□□□ -1.73
LINC00963-215	ENST00000622972	GNG5	P63218	68 aa		4.22	□□□□□ -1.73
LINC00963-215	ENST00000622972	UBE2L3	P68036	154 aa	Known RBP	4.22	□□□□□ -1.73
LINC00963-215	ENST00000622972	SERF2	P84101	59 aa		4.22	□□□□□ -1.73
LINC00963-215	ENST00000622972	ERCC8	Q13216	396 aa		4.22	□□□□□ -1.73
LINC00963-215	ENST00000622972	PSG3	Q16557	428 aa		4.22	□□□□□ -1.73
LINC00963-215	ENST00000622972	ACOT6	Q3I5F7	207 aa	Predicted RBP	4.22	□□□□□ -1.73
LINC00963-215	ENST00000622972	LCE4A	Q5TA78	99 aa		4.22	□□□□□ -1.73
LINC00963-215	ENST00000622972	LCN15	Q6UWW0	184 aa		4.22	□□□□□ -1.73
LINC00963-215	ENST00000622972		Q6ZTC4	211 aa		4.22	□□□□□ -1.73
LINC00963-215	ENST00000622972	ZNF767P	Q75MW2	155 aa		4.22	□□□□□ -1.73
LINC00963-215	ENST00000622972	BPIFA4P	Q86YQ2	179 aa		4.22	□□□□□ -1.73
LINC00963-215	ENST00000622972	BAP18	Q8IXM2	172 aa		4.22	□□□□□ -1.73
LINC00963-215	ENST00000622972		Q8NAQ8	132 aa		4.22	□□□□□ -1.73
LINC00963-215	ENST00000622972	PCNP	Q8WW12	178 aa	Known RBP	4.22	□□□□□ -1.73
LINC00963-215	ENST00000622972	GNPNAT1	Q96EK6	184 aa	Predicted RBP	4.22	□□□□□ -1.73
LINC00963-215	ENST00000622972	TVP23C	Q96ET8	276 aa		4.22	□□□□□ -1.73
LINC00963-215	ENST00000622972	FAM19A4	Q96LR4	140 aa		4.22	□□□□□ -1.73
LINC00963-215	ENST00000622972	GPR82	Q96P67	336 aa		4.22	□□□□□ -1.73
LINC00963-215	ENST00000622972	VGLL1	Q99990	258 aa		4.22	□□□□□ -1.73
LINC00963-215	ENST00000622972	PAXX	Q9BUH6	204 aa		4.22	□□□□□ -1.73
LINC00963-215	ENST00000622972	KCNIP2	Q9NS61	270 aa		4.22	□□□□□ -1.73
LINC00963-215	ENST00000622972	DNAH6	Q9C0G6	4158 aa		4.22	□□□□□ -1.73
LINC00963-215	ENST00000622972	VPS13D	Q5THJ4	4388 aa		4.22	□□□□□ -1.73
LINC00963-215	ENST00000622972	IGHV4-4	A0A075B6R2	117 aa		4.21	□□□□□ -1.74
LINC00963-215	ENST00000622972	DEFB131B	A0A096LNP1	70 aa		4.21	□□□□□ -1.74
LINC00963-215	ENST00000622972	CTXND1	A0A1B0GTU2	59 aa		4.21	□□□□□ -1.74
LINC00963-215	ENST00000622972		A0A1B0GV50	99 aa		4.21	□□□□□ -1.74
LINC00963-215	ENST00000622972	KRTAP23-1	A1A580	65 aa		4.21	□□□□□ -1.74
LINC00963-215	ENST00000622972	MAP1LC3B2	A6NCE7	125 aa		4.21	□□□□□ -1.74
LINC00963-215	ENST00000622972	ZNF705E	A8MWA4	302 aa	Predicted RBP	4.21	□□□□□ -1.74
LINC00963-215	ENST00000622972	PFDN1	O60925	122 aa		4.21	□□□□□ -1.74
LINC00963-215	ENST00000622972	ZNF253	O75346	499 aa		4.21	□□□□□ -1.74
LINC00963-215	ENST00000622972	IGLV2-11	P01706	119 aa		4.21	□□□□□ -1.74
LINC00963-215	ENST00000622972	CT45A10	P0DMU9	189 aa		4.21	□□□□□ -1.74
LINC00963-215	ENST00000622972	TPT1	P13693	172 aa	Known RBP	4.21	□□□□□ -1.74
LINC00963-215	ENST00000622972	KHDC3L	Q587J8	217 aa		4.21	□□□□□ -1.74
LINC00963-215	ENST00000622972	ALKAL2	Q6UX46	152 aa		4.21	□□□□□ -1.74
LINC00963-215	ENST00000622972	FOXI2	Q6ZQN5	318 aa		4.21	□□□□□ -1.74
LINC00963-215	ENST00000622972	C1orf158	Q8N1D5	194 aa		4.21	□□□□□ -1.74
LINC00963-215	ENST00000622972	OR4B1	Q8NGF8	309 aa		4.21	□□□□□ -1.74
LINC00963-215	ENST00000622972	OR8A1	Q8NGG7	326 aa		4.21	□□□□□ -1.74
LINC00963-215	ENST00000622972		Q8TAT8	98 aa		4.21	□□□□□ -1.74
LINC00963-215	ENST00000622972	FAM213B	Q8TBF2	198 aa		4.21	□□□□□ -1.74
LINC00963-215	ENST00000622972	MBD3L1	Q8WWY6	194 aa		4.21	□□□□□ -1.74
LINC00963-215	ENST00000622972	RPUSD4	Q96CM3	377 aa	Known RBP	4.21	□□□□□ -1.74
LINC00963-215	ENST00000622972	MAP1LC3B	Q9GZQ8	125 aa		4.21	□□□□□ -1.74
LINC00963-215	ENST00000622972		Q9H3A6	140 aa		4.21	□□□□□ -1.74
LINC00963-215	ENST00000622972	APLN	Q9ULZ1	77 aa		4.21	□□□□□ -1.74
LINC00963-215	ENST00000622972	MUC4	Q99102	2169 aa		4.2	□□□□□ -1.74
LINC00963-215	ENST00000622972	TRAV8-1	A0A0A6YYK1	113 aa		4.2	□□□□□ -1.74
LINC00963-215	ENST00000622972	KRTAP9-7	A8MTY7	169 aa		4.2	□□□□□ -1.74
LINC00963-215	ENST00000622972		M0R2Z0	102 aa		4.2	□□□□□ -1.74
LINC00963-215	ENST00000622972	HTN3	P15516	51 aa		4.2	□□□□□ -1.74
LINC00963-215	ENST00000622972	ATP5G3	P48201	142 aa		4.2	□□□□□ -1.74
LINC00963-215	ENST00000622972	MEOX2	P50222	304 aa		4.2	□□□□□ -1.74
LINC00963-215	ENST00000622972	SULT1A2	P50226	295 aa		4.2	□□□□□ -1.74
LINC00963-215	ENST00000622972	RAN	P62826	216 aa	Known RBP	4.2	□□□□□ -1.74
LINC00963-215	ENST00000622972	IFITM2	Q01629	132 aa		4.2	□□□□□ -1.74
LINC00963-215	ENST00000622972	HIST1H1A	Q02539	215 aa	Predicted RBP	4.2	□□□□□ -1.74
LINC00963-215	ENST00000622972	PDE6H	Q13956	83 aa		4.2	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms