RNA–Protein interactions for RNA: ENST00000621870.4

GGA3-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best)

Gene GGA3, Length 4,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-223ENST00000621870 ARMS2P0C7Q2 107 aa7.33□□□□□ -1.24
GGA3-223ENST00000621870 HOXA5P20719 270 aa7.33□□□□□ -1.24
GGA3-223ENST00000621870 CFAP161Q6P656 301 aa7.33□□□□□ -1.24
GGA3-223ENST00000621870 FNDC10F2Z333 226 aa7.33□□□□□ -1.24
GGA3-223ENST00000621870 SH2D1AO60880 128 aa7.33□□□□□ -1.24
GGA3-223ENST00000621870 HINT1P49773 126 aaPredicted RBP7.33□□□□□ -1.24
GGA3-223ENST00000621870 CACNG7P62955 275 aa7.33□□□□□ -1.24
GGA3-223ENST00000621870 VGLL1Q99990 258 aa7.33□□□□□ -1.24
GGA3-223ENST00000621870 ANAPC10Q9UM13 185 aa7.33□□□□□ -1.24
GGA3-223ENST00000621870 A0A087WWC5 75 aa7.33□□□□□ -1.24
GGA3-223ENST00000621870 CCL24O00175 119 aa7.33□□□□□ -1.24
GGA3-223ENST00000621870 SERF1AO75920 110 aa7.33□□□□□ -1.24
GGA3-223ENST00000621870 IGLC1P0CG04 106 aa7.33□□□□□ -1.24
GGA3-223ENST00000621870 PDE6HQ13956 83 aa7.33□□□□□ -1.24
GGA3-223ENST00000621870 MGAM2Q2M2H8 2515 aa7.32□□□□□ -1.24
GGA3-223ENST00000621870 TRAV12-2A0A075B6T6 113 aa7.32□□□□□ -1.24
GGA3-223ENST00000621870 F5H768 121 aa7.32□□□□□ -1.24
GGA3-223ENST00000621870 OBSL1O75147 1896 aa7.32□□□□□ -1.24
GGA3-223ENST00000621870 NDUFA3O95167 84 aa7.32□□□□□ -1.24
GGA3-223ENST00000621870 CD28P10747 220 aa7.32□□□□□ -1.24
GGA3-223ENST00000621870 HOXD3P31249 432 aaPredicted RBP7.32□□□□□ -1.24
GGA3-223ENST00000621870 FNDC4Q9H6D8 234 aaPredicted RBP7.32□□□□□ -1.24
GGA3-223ENST00000621870 H3BRM9 83 aa7.32□□□□□ -1.24
GGA3-223ENST00000621870 WFDC11Q8NEX6 87 aa7.32□□□□□ -1.24
GGA3-223ENST00000621870 PHLDA1Q8WV24 401 aaPredicted RBP7.32□□□□□ -1.24
GGA3-223ENST00000621870 NXT2Q9NPJ8 142 aaKnown RBP7.32□□□□□ -1.24
GGA3-223ENST00000621870 MRPL27Q9P0M9 148 aaKnown RBP7.32□□□□□ -1.24
GGA3-223ENST00000621870 KLK9Q9UKQ9 250 aa7.32□□□□□ -1.24
GGA3-223ENST00000621870 ADARB2-AS1A8MUL3 147 aa7.32□□□□□ -1.24
GGA3-223ENST00000621870 FOXL1Q12952 345 aa7.32□□□□□ -1.24
GGA3-223ENST00000621870 DNLZQ5SXM8 178 aa7.32□□□□□ -1.24
GGA3-223ENST00000621870 IGLC7A0M8Q6 106 aa7.31□□□□□ -1.24
GGA3-223ENST00000621870 POU2AF1Q16633 256 aa7.31□□□□□ -1.24
GGA3-223ENST00000621870 C1orf159Q96HA4 380 aa7.31□□□□□ -1.24
GGA3-223ENST00000621870 ALKBH7Q9BT30 221 aaPredicted RBP7.31□□□□□ -1.24
GGA3-223ENST00000621870 IGHV7-81A0A0B4J1V7 117 aa7.31□□□□□ -1.24
GGA3-223ENST00000621870 SRSF1Q07955 248 aaKnown RBP eCLIP7.31□□□□□ -1.24
GGA3-223ENST00000621870 ST6GALNAC6Q969X2 333 aa7.31□□□□□ -1.24
GGA3-223ENST00000621870 TSSC4Q9Y5U2 329 aaPredicted RBP7.31□□□□□ -1.24
GGA3-223ENST00000621870 TRAV9-1A0A075B6T8 112 aa7.31□□□□□ -1.24
GGA3-223ENST00000621870 C9JQL5 133 aa7.31□□□□□ -1.24
GGA3-223ENST00000621870 LINC00614P0C842 121 aa7.31□□□□□ -1.24
GGA3-223ENST00000621870 HAPLN4Q86UW8 402 aa7.31□□□□□ -1.24
GGA3-223ENST00000621870 C14orf144Q96I85 54 aa7.31□□□□□ -1.24
GGA3-223ENST00000621870 TMEM131Q92545 1883 aa7.31□□□□□ -1.24
GGA3-223ENST00000621870 TRBV19A0A075B6N1 114 aa7.3□□□□□ -1.24
GGA3-223ENST00000621870 DAD1P61803 113 aa7.3□□□□□ -1.24
GGA3-223ENST00000621870 BCL6BQ8N143 479 aaPredicted RBP7.3□□□□□ -1.24
GGA3-223ENST00000621870 TNRC6AQ8NDV7 1962 aaKnown RBP7.3□□□□□ -1.24
GGA3-223ENST00000621870 IGHV3-16A0A0C4DH30 117 aa7.3□□□□□ -1.24
GGA3-223ENST00000621870 D6R8Y8 96 aa7.3□□□□□ -1.24
GGA3-223ENST00000621870 ADMP35318 185 aa7.3□□□□□ -1.24
GGA3-223ENST00000621870 PARD6GQ9BYG4 376 aaPredicted RBP7.3□□□□□ -1.24
GGA3-223ENST00000621870 UQCR10Q9UDW1 63 aa7.3□□□□□ -1.24
GGA3-223ENST00000621870 GAGE12BA1L429 117 aa7.3□□□□□ -1.24
GGA3-223ENST00000621870 GAGE7O76087 117 aa7.3□□□□□ -1.24
GGA3-223ENST00000621870 HBDP02042 147 aa7.3□□□□□ -1.24
GGA3-223ENST00000621870 GAGE12FP0CL80 117 aa7.3□□□□□ -1.24
GGA3-223ENST00000621870 GAGE12GP0CL81 117 aa7.3□□□□□ -1.24
GGA3-223ENST00000621870 GAGE12IP0CL82 117 aa7.3□□□□□ -1.24
GGA3-223ENST00000621870 ORMDL2Q53FV1 153 aa7.3□□□□□ -1.24
GGA3-223ENST00000621870 C1orf194Q5T5A4 169 aa7.3□□□□□ -1.24
GGA3-223ENST00000621870 MCRIP2Q9BUT9 160 aaKnown RBP7.3□□□□□ -1.24
GGA3-223ENST00000621870 F6UB75 175 aa7.3□□□□□ -1.24
GGA3-223ENST00000621870 LBHQ53QV2 105 aaPredicted RBP7.3□□□□□ -1.24
GGA3-223ENST00000621870 PYY3Q5JQD4 70 aa7.3□□□□□ -1.24
GGA3-223ENST00000621870 DPH3P1Q9H4G8 78 aa7.3□□□□□ -1.24
GGA3-223ENST00000621870 CEP192Q8TEP8 1941 aa7.3□□□□□ -1.24
GGA3-223ENST00000621870 PSCAO43653 123 aa7.29□□□□□ -1.24
GGA3-223ENST00000621870 SLURP1P55000 103 aa7.29□□□□□ -1.24
GGA3-223ENST00000621870 Q86TA4 180 aa7.29□□□□□ -1.24
GGA3-223ENST00000621870 Q8N7P7 452 aa7.29□□□□□ -1.24
GGA3-223ENST00000621870 ZNF491Q8N8L2 437 aa7.29□□□□□ -1.24
GGA3-223ENST00000621870 IGHV3-64A0A075B6Q5 118 aa7.29□□□□□ -1.24
GGA3-223ENST00000621870 IGHV7-4-1A0A0J9YVY3 117 aa7.29□□□□□ -1.24
GGA3-223ENST00000621870 LMO4P61968 165 aa7.29□□□□□ -1.24
GGA3-223ENST00000621870 HIST1H2BKO60814 126 aa7.29□□□□□ -1.24
GGA3-223ENST00000621870 IGLV1-47P01700 117 aa7.29□□□□□ -1.24
GGA3-223ENST00000621870 HIST1H2BJP06899 126 aa7.29□□□□□ -1.24
GGA3-223ENST00000621870 HIST1H2BOP23527 126 aa7.29□□□□□ -1.24
GGA3-223ENST00000621870 HIST1H2BBP33778 126 aa7.29□□□□□ -1.24
GGA3-223ENST00000621870 HIST1H2BDP58876 126 aa7.29□□□□□ -1.24
GGA3-223ENST00000621870 HIST1H2BCP62807 126 aa7.29□□□□□ -1.24
GGA3-223ENST00000621870 HIST2H2BEQ16778 126 aa7.29□□□□□ -1.24
GGA3-223ENST00000621870 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.29□□□□□ -1.24
GGA3-223ENST00000621870 DMRTA1Q5VZB9 504 aa7.29□□□□□ -1.24
GGA3-223ENST00000621870 AMN1Q8IY45 258 aa7.29□□□□□ -1.24
GGA3-223ENST00000621870 Q8N9W7 124 aa7.29□□□□□ -1.24
GGA3-223ENST00000621870 HIST1H2BHQ93079 126 aa7.29□□□□□ -1.24
GGA3-223ENST00000621870 RITA1Q96K30 269 aa7.29□□□□□ -1.24
GGA3-223ENST00000621870 HIST1H2BNQ99877 126 aa7.29□□□□□ -1.24
GGA3-223ENST00000621870 HIST1H2BMQ99879 126 aa7.29□□□□□ -1.24
GGA3-223ENST00000621870 SMPXQ9UHP9 88 aa7.29□□□□□ -1.24
GGA3-223ENST00000621870 ARHGAP21Q5T5U3 1957 aa7.28□□□□□ -1.24
GGA3-223ENST00000621870 SMKR1H3BMG3 65 aa7.28□□□□□ -1.24
GGA3-223ENST00000621870 CDKN1BP46527 198 aa7.28□□□□□ -1.24
GGA3-223ENST00000621870 SSBP2P81877 361 aaPredicted RBP7.28□□□□□ -1.24
GGA3-223ENST00000621870 KRTAP27-1Q3LI81 207 aa7.28□□□□□ -1.24
GGA3-223ENST00000621870 C8orf31Q8N9H6 132 aa7.28□□□□□ -1.24
GGA3-223ENST00000621870 APOMO95445 188 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms