RNA–Protein interactions for RNA: ENST00000621526.4

CPNE3-211, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 279 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-211ENST00000621526 ANXA7P20073 488 aaKnown RBP1.42□□□□□ -2.18
CPNE3-211ENST00000621526 RNASE4P34096 147 aaKnown RBP1.42□□□□□ -2.18
CPNE3-211ENST00000621526 INPP1P49441 399 aa1.42□□□□□ -2.18
CPNE3-211ENST00000621526 FGF8P55075 233 aaPredicted RBP1.42□□□□□ -2.18
CPNE3-211ENST00000621526 TAS2R46P59540 309 aa1.42□□□□□ -2.18
CPNE3-211ENST00000621526 KRTAP10-6P60371 365 aaPredicted RBP1.42□□□□□ -2.18
CPNE3-211ENST00000621526 RAP2BP61225 183 aa1.42□□□□□ -2.18
CPNE3-211ENST00000621526 RND3P61587 244 aa1.42□□□□□ -2.18
CPNE3-211ENST00000621526 SELENOTP62341 195 aa1.42□□□□□ -2.18
CPNE3-211ENST00000621526 SRPXP78539 464 aa1.42□□□□□ -2.18
CPNE3-211ENST00000621526 MIAQ16674 131 aa1.42□□□□□ -2.18
CPNE3-211ENST00000621526 TMEM183BQ1AE95 376 aa1.42□□□□□ -2.18
CPNE3-211ENST00000621526 IZUMO4Q1ZYL8 232 aa1.42□□□□□ -2.18
CPNE3-211ENST00000621526 TRIM16LQ309B1 348 aa1.42□□□□□ -2.18
CPNE3-211ENST00000621526 KRTAP6-3Q3LI67 103 aa1.42□□□□□ -2.18
CPNE3-211ENST00000621526 ASB16-AS1Q495Z4 193 aa1.42□□□□□ -2.18
CPNE3-211ENST00000621526 DNAL1Q4LDG9 190 aa1.42□□□□□ -2.18
CPNE3-211ENST00000621526 PXDC1Q5TGL8 231 aa1.42□□□□□ -2.18
CPNE3-211ENST00000621526 LAIR2Q6ISS4 152 aa1.42□□□□□ -2.18
CPNE3-211ENST00000621526 KCNIP4Q6PIL6 250 aa1.42□□□□□ -2.18
CPNE3-211ENST00000621526 LCN15Q6UWW0 184 aa1.42□□□□□ -2.18
CPNE3-211ENST00000621526 LYSMD2Q8IV50 215 aa1.42□□□□□ -2.18
CPNE3-211ENST00000621526 TMEM183AQ8IXX5 376 aa1.42□□□□□ -2.18
CPNE3-211ENST00000621526 Q8N3U1 123 aa1.42□□□□□ -2.18
CPNE3-211ENST00000621526 ARRDC1Q8N5I2 433 aa1.42□□□□□ -2.18
CPNE3-211ENST00000621526 STPG4Q8N801 248 aa1.42□□□□□ -2.18
CPNE3-211ENST00000621526 LHFPL5Q8TAF8 219 aa1.42□□□□□ -2.18
CPNE3-211ENST00000621526 MRPL53Q96EL3 112 aaKnown RBP1.42□□□□□ -2.18
CPNE3-211ENST00000621526 SAT2Q96F10 170 aaPredicted RBP1.42□□□□□ -2.18
CPNE3-211ENST00000621526 DNAJC30Q96LL9 226 aa1.42□□□□□ -2.18
CPNE3-211ENST00000621526 MGLLQ99685 303 aa1.42□□□□□ -2.18
CPNE3-211ENST00000621526 ARPC5LQ9BPX5 153 aa1.42□□□□□ -2.18
CPNE3-211ENST00000621526 MLST8Q9BVC4 326 aa1.42□□□□□ -2.18
CPNE3-211ENST00000621526 PARD6GQ9BYG4 376 aaPredicted RBP1.42□□□□□ -2.18
CPNE3-211ENST00000621526 AGPAT4-IT1Q9H0P7 198 aa1.42□□□□□ -2.18
CPNE3-211ENST00000621526 MIXL1Q9H2W2 232 aa1.42□□□□□ -2.18
CPNE3-211ENST00000621526 AUNIPQ9H7T9 357 aa1.42□□□□□ -2.18
CPNE3-211ENST00000621526 SLC39A9Q9NUM3 307 aa1.42□□□□□ -2.18
CPNE3-211ENST00000621526 AP5S1Q9NUS5 200 aa1.42□□□□□ -2.18
CPNE3-211ENST00000621526 EHFQ9NZC4 300 aa1.42□□□□□ -2.18
CPNE3-211ENST00000621526 PXMP4Q9Y6I8 212 aa1.42□□□□□ -2.18
CPNE3-211ENST00000621526 IGLV10-54A0A075B6I4 117 aa1.41□□□□□ -2.18
CPNE3-211ENST00000621526 TRGV11A0A075B6L2 103 aa1.41□□□□□ -2.18
CPNE3-211ENST00000621526 TRAV18A0A075B6X5 111 aa1.41□□□□□ -2.18
CPNE3-211ENST00000621526 TRAV8-4A0A0B4J246 113 aa1.41□□□□□ -2.18
CPNE3-211ENST00000621526 TEX13DA0A0J9YY54 714 aaPredicted RBP1.41□□□□□ -2.18
CPNE3-211ENST00000621526 C3orf85A0A1B0GTC6 90 aa1.41□□□□□ -2.18
CPNE3-211ENST00000621526 LINC00854A0A1B0GVQ3 168 aa1.41□□□□□ -2.18
CPNE3-211ENST00000621526 MEIS3P1A6NDR6 274 aa1.41□□□□□ -2.18
CPNE3-211ENST00000621526 NOTOA8MTQ0 251 aa1.41□□□□□ -2.18
CPNE3-211ENST00000621526 CEBPZOSA8MTT3 80 aa1.41□□□□□ -2.18
CPNE3-211ENST00000621526 WRBO00258 174 aa1.41□□□□□ -2.18
CPNE3-211ENST00000621526 SLC17A3O00476 420 aa1.41□□□□□ -2.18
CPNE3-211ENST00000621526 TMEM127O75204 238 aa1.41□□□□□ -2.18
CPNE3-211ENST00000621526 P01737 135 aa1.41□□□□□ -2.18
CPNE3-211ENST00000621526 PI3P19957 117 aa1.41□□□□□ -2.18
CPNE3-211ENST00000621526 RAB3BP20337 219 aa1.41□□□□□ -2.18
CPNE3-211ENST00000621526 RPS10P46783 165 aaKnown RBP1.41□□□□□ -2.18
CPNE3-211ENST00000621526 AKR1C2P52895 323 aa1.41□□□□□ -2.18
CPNE3-211ENST00000621526 UBE2MP61081 183 aaKnown RBP1.41□□□□□ -2.18
CPNE3-211ENST00000621526 PKIAP61925 76 aa1.41□□□□□ -2.18
CPNE3-211ENST00000621526 TSPAN5P62079 268 aa1.41□□□□□ -2.18
CPNE3-211ENST00000621526 RAB11AP62491 216 aa1.41□□□□□ -2.18
CPNE3-211ENST00000621526 MT1HP80294 61 aa1.41□□□□□ -2.18
CPNE3-211ENST00000621526 FABP5Q01469 135 aa1.41□□□□□ -2.18
CPNE3-211ENST00000621526 COX6A2Q02221 97 aa1.41□□□□□ -2.18
CPNE3-211ENST00000621526 BTN1A1Q13410 526 aa1.41□□□□□ -2.18
CPNE3-211ENST00000621526 MAJINQ3KP22 176 aa1.41□□□□□ -2.18
CPNE3-211ENST00000621526 PHLDA2Q53GA4 152 aa1.41□□□□□ -2.18
CPNE3-211ENST00000621526 PIK3CD-AS1Q5SR53 167 aa1.41□□□□□ -2.18
CPNE3-211ENST00000621526 CFAP126Q5VTH2 177 aa1.41□□□□□ -2.18
CPNE3-211ENST00000621526 KRTAP26-1Q6PEX3 210 aa1.41□□□□□ -2.18
CPNE3-211ENST00000621526 ZFP2Q6ZN57 461 aa1.41□□□□□ -2.18
CPNE3-211ENST00000621526 TMEM182Q6ZP80 229 aaPredicted RBP1.41□□□□□ -2.18
CPNE3-211ENST00000621526 ZNF546Q86UE3 836 aa1.41□□□□□ -2.18
CPNE3-211ENST00000621526 BPIFA4PQ86YQ2 179 aa1.41□□□□□ -2.18
CPNE3-211ENST00000621526 C10orf67Q8IYJ2 551 aa1.41□□□□□ -2.18
CPNE3-211ENST00000621526 ZFAND2AQ8N6M9 145 aa1.41□□□□□ -2.18
CPNE3-211ENST00000621526 LYPD6BQ8NI32 183 aa1.41□□□□□ -2.18
CPNE3-211ENST00000621526 ZFAND1Q8TCF1 268 aa1.41□□□□□ -2.18
CPNE3-211ENST00000621526 UFD1Q92890 307 aa1.41□□□□□ -2.18
CPNE3-211ENST00000621526 YIPF6Q96EC8 236 aa1.41□□□□□ -2.18
CPNE3-211ENST00000621526 C9orf16Q9BUW7 83 aa1.41□□□□□ -2.18
CPNE3-211ENST00000621526 MND1Q9BWT6 205 aa1.41□□□□□ -2.18
CPNE3-211ENST00000621526 SAMD10Q9BYL1 202 aa1.41□□□□□ -2.18
CPNE3-211ENST00000621526 SRRQ9GZT4 340 aa1.41□□□□□ -2.18
CPNE3-211ENST00000621526 PRR34Q9NV39 138 aa1.41□□□□□ -2.18
CPNE3-211ENST00000621526 FKBP14Q9NWM8 211 aa1.41□□□□□ -2.18
CPNE3-211ENST00000621526 ANAPC10Q9UM13 185 aa1.41□□□□□ -2.18
CPNE3-211ENST00000621526 HIGD1AQ9Y241 93 aa1.41□□□□□ -2.18
CPNE3-211ENST00000621526 PRELID1Q9Y255 219 aa1.41□□□□□ -2.18
CPNE3-211ENST00000621526 PKIGQ9Y2B9 76 aa1.41□□□□□ -2.18
CPNE3-211ENST00000621526 LSM2Q9Y333 95 aaKnown RBP1.41□□□□□ -2.18
CPNE3-211ENST00000621526 IGLV7-46A0A075B6I9 117 aa1.4□□□□□ -2.19
CPNE3-211ENST00000621526 PIGBOS1A0A0B4J2F0 54 aa1.4□□□□□ -2.19
CPNE3-211ENST00000621526 IGHV3-16A0A0C4DH30 117 aa1.4□□□□□ -2.19
CPNE3-211ENST00000621526 A0A0G2JRQ6 117 aa1.4□□□□□ -2.19
CPNE3-211ENST00000621526 TRDV1A0A1B0GX56 115 aa1.4□□□□□ -2.19
CPNE3-211ENST00000621526 hDV102S1A0JD36 115 aa1.4□□□□□ -2.19
CPNE3-211ENST00000621526 DIRC3C9JPN6 131 aa1.4□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms