RNA–Protein interactions for RNA: ENST00000620709.4

CD40-207, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-207ENST00000620709 IGKV3-7A0A075B6H7 116 aa11.91□□□□□ -0.5
CD40-207ENST00000620709 TSPAN4O14817 238 aa11.91□□□□□ -0.5
CD40-207ENST00000620709 SCO1O75880 301 aa11.91□□□□□ -0.5
CD40-207ENST00000620709 RPL35AP18077 110 aaKnown RBP11.91□□□□□ -0.5
CD40-207ENST00000620709 RPL35P42766 123 aaKnown RBP11.91□□□□□ -0.5
CD40-207ENST00000620709 TFPI2P48307 235 aa11.91□□□□□ -0.5
CD40-207ENST00000620709 CNN1P51911 297 aaKnown RBP11.91□□□□□ -0.5
CD40-207ENST00000620709 APOC4P55056 127 aa11.91□□□□□ -0.5
CD40-207ENST00000620709 RHEBQ15382 184 aa11.91□□□□□ -0.5
CD40-207ENST00000620709 EXOC3-AS1Q8N2X6 119 aa11.91□□□□□ -0.5
CD40-207ENST00000620709 SLC50A1Q9BRV3 221 aa11.91□□□□□ -0.5
CD40-207ENST00000620709 ATG101Q9BSB4 218 aa11.91□□□□□ -0.5
CD40-207ENST00000620709 RHPN1-AS1Q9BWJ2 59 aa11.91□□□□□ -0.5
CD40-207ENST00000620709 SMPXQ9UHP9 88 aa11.91□□□□□ -0.5
CD40-207ENST00000620709 ALMS1Q8TCU4 4167 aa11.91□□□□□ -0.5
CD40-207ENST00000620709 HELTA6NFD8 242 aa11.91□□□□□ -0.5
CD40-207ENST00000620709 OR4C46A6NHA9 309 aa11.91□□□□□ -0.5
CD40-207ENST00000620709 C9JCJ5 164 aa11.91□□□□□ -0.5
CD40-207ENST00000620709 GNG5P63218 68 aa11.91□□□□□ -0.5
CD40-207ENST00000620709 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.91□□□□□ -0.5
CD40-207ENST00000620709 RPH3ALQ9UNE2 315 aa11.91□□□□□ -0.5
CD40-207ENST00000620709 B4DEV8 164 aa11.9□□□□□ -0.5
CD40-207ENST00000620709 CHEK1O14757 476 aa11.9□□□□□ -0.5
CD40-207ENST00000620709 TCRAP04437 139 aa11.9□□□□□ -0.5
CD40-207ENST00000620709 TAS2R60P59551 318 aa11.9□□□□□ -0.5
CD40-207ENST00000620709 DEFB135Q30KP9 77 aa11.9□□□□□ -0.5
CD40-207ENST00000620709 ZNF331Q9NQX6 463 aaPredicted RBP11.9□□□□□ -0.5
CD40-207ENST00000620709 EPPK1P58107 5090 aaKnown RBP11.9□□□□□ -0.5
CD40-207ENST00000620709 TRBV20OR9-2A0A075B6H5 130 aa11.89□□□□□ -0.51
CD40-207ENST00000620709 C7orf77A4D0Y5 90 aa11.89□□□□□ -0.51
CD40-207ENST00000620709 CXorf65A6NEN9 183 aa11.89□□□□□ -0.51
CD40-207ENST00000620709 SPRY2O43597 315 aa11.89□□□□□ -0.51
CD40-207ENST00000620709 RPL23P62829 140 aaKnown RBP11.89□□□□□ -0.51
CD40-207ENST00000620709 ADIRFQ15847 76 aa11.89□□□□□ -0.51
CD40-207ENST00000620709 ODF3L2Q3SX64 289 aa11.89□□□□□ -0.51
CD40-207ENST00000620709 ARL6IP6Q8N6S5 226 aa11.89□□□□□ -0.51
CD40-207ENST00000620709 RPS10P5Q9NQ39 176 aa11.89□□□□□ -0.51
CD40-207ENST00000620709 LY96Q9Y6Y9 160 aa11.89□□□□□ -0.51
CD40-207ENST00000620709 A0A0J9YWU9 116 aa11.88□□□□□ -0.51
CD40-207ENST00000620709 S100A9P06702 114 aaKnown RBP11.88□□□□□ -0.51
CD40-207ENST00000620709 CSN1S1P47710 185 aa11.88□□□□□ -0.51
CD40-207ENST00000620709 GNG4P50150 75 aa11.88□□□□□ -0.51
CD40-207ENST00000620709 UBE2G1P62253 170 aa11.88□□□□□ -0.51
CD40-207ENST00000620709 CENPWQ5EE01 88 aa11.88□□□□□ -0.51
CD40-207ENST00000620709 LINC01551Q86U37 167 aa11.88□□□□□ -0.51
CD40-207ENST00000620709 APRG1Q8IVJ8 170 aa11.88□□□□□ -0.51
CD40-207ENST00000620709 GBGT1Q8N5D6 347 aa11.88□□□□□ -0.51
CD40-207ENST00000620709 SERTM2A0A1B0GWG4 89 aa11.87□□□□□ -0.51
CD40-207ENST00000620709 K7EQM0 130 aa11.87□□□□□ -0.51
CD40-207ENST00000620709 TMEM183BQ1AE95 376 aa11.87□□□□□ -0.51
CD40-207ENST00000620709 FMC1Q96HJ9 113 aa11.87□□□□□ -0.51
CD40-207ENST00000620709 IGF2BP2-AS1Q96M15 143 aa11.87□□□□□ -0.51
CD40-207ENST00000620709 PRELID1Q9Y255 219 aa11.87□□□□□ -0.51
CD40-207ENST00000620709 M0R3E3 92 aa11.86□□□□□ -0.51
CD40-207ENST00000620709 ZNF124Q15973 351 aa11.86□□□□□ -0.51
CD40-207ENST00000620709 GOLT1AQ6ZVE7 132 aa11.86□□□□□ -0.51
CD40-207ENST00000620709 WFDC3Q8IUB2 231 aa11.86□□□□□ -0.51
CD40-207ENST00000620709 LINC00479Q96M42 142 aa11.86□□□□□ -0.51
CD40-207ENST00000620709 CLEC5AQ9NY25 188 aa11.86□□□□□ -0.51
CD40-207ENST00000620709 KLF12Q9Y4X4 402 aa11.86□□□□□ -0.51
CD40-207ENST00000620709 A0A087WWC5 75 aa11.86□□□□□ -0.51
CD40-207ENST00000620709 TRAV34A0A0B4J273 112 aa11.86□□□□□ -0.51
CD40-207ENST00000620709 PGPEP1LA6NFU8 196 aa11.86□□□□□ -0.51
CD40-207ENST00000620709 DIRC3C9JPN6 131 aa11.86□□□□□ -0.51
CD40-207ENST00000620709 UBE2CO00762 179 aa11.86□□□□□ -0.51
CD40-207ENST00000620709 ISLRO14498 428 aa11.86□□□□□ -0.51
CD40-207ENST00000620709 RPL11P62913 178 aaKnown RBP11.86□□□□□ -0.51
CD40-207ENST00000620709 Q6ZWC4 215 aa11.86□□□□□ -0.51
CD40-207ENST00000620709 TCF24Q7RTU0 167 aa11.86□□□□□ -0.51
CD40-207ENST00000620709 MRPL53Q96EL3 112 aaKnown RBP11.86□□□□□ -0.51
CD40-207ENST00000620709 NRN1Q9NPD7 142 aa11.86□□□□□ -0.51
CD40-207ENST00000620709 BTN1A1Q13410 526 aa11.85□□□□□ -0.51
CD40-207ENST00000620709 SAMD13Q5VXD3 122 aa11.85□□□□□ -0.51
CD40-207ENST00000620709 TMEM75Q8N9X5 138 aa11.85□□□□□ -0.51
CD40-207ENST00000620709 OCC1Q8TAD7 63 aa11.85□□□□□ -0.51
CD40-207ENST00000620709 C16orf92Q96LL3 132 aa11.85□□□□□ -0.51
CD40-207ENST00000620709 TP53TG1Q9Y2A0 90 aa11.85□□□□□ -0.51
CD40-207ENST00000620709 TRBV6-1A0A0K0K1D8 114 aa11.84□□□□□ -0.51
CD40-207ENST00000620709 MT-ND4LP03901 98 aa11.84□□□□□ -0.51
CD40-207ENST00000620709 IGFL4Q6B9Z1 124 aa11.84□□□□□ -0.51
CD40-207ENST00000620709 BAGE2Q86Y30 109 aa11.84□□□□□ -0.51
CD40-207ENST00000620709 ISOC2Q96AB3 205 aa11.84□□□□□ -0.51
CD40-207ENST00000620709 SMIM12Q96EX1 92 aa11.84□□□□□ -0.51
CD40-207ENST00000620709 TRAV8-2A0A0B4J237 113 aa11.83□□□□□ -0.52
CD40-207ENST00000620709 KIR2DL5BA0A0G2JN68 375 aa11.83□□□□□ -0.52
CD40-207ENST00000620709 KIR2DL5BA0A0G2JPC4 375 aa11.83□□□□□ -0.52
CD40-207ENST00000620709 DNASE2O00115 360 aaPredicted RBP11.83□□□□□ -0.52
CD40-207ENST00000620709 HLA-DMBP28068 263 aa11.83□□□□□ -0.52
CD40-207ENST00000620709 PAFAH1B2P68402 229 aa11.83□□□□□ -0.52
CD40-207ENST00000620709 RNF212Q495C1 297 aa11.83□□□□□ -0.52
CD40-207ENST00000620709 TMEM88Q6PEY1 159 aa11.83□□□□□ -0.52
CD40-207ENST00000620709 Q86TA4 180 aa11.83□□□□□ -0.52
CD40-207ENST00000620709 CBLN2Q8IUK8 224 aa11.83□□□□□ -0.52
CD40-207ENST00000620709 KIR2DL5AQ8N109 375 aa11.83□□□□□ -0.52
CD40-207ENST00000620709 KIR2DL5BQ8NHK3 375 aa11.83□□□□□ -0.52
CD40-207ENST00000620709 RNF183Q96D59 192 aa11.83□□□□□ -0.52
CD40-207ENST00000620709 CTDSP1Q9GZU7 261 aa11.83□□□□□ -0.52
CD40-207ENST00000620709 MAP6D1Q9H9H5 199 aa11.83□□□□□ -0.52
CD40-207ENST00000620709 SMCO4Q9NRQ5 59 aa11.83□□□□□ -0.52
CD40-207ENST00000620709 BIRC6Q9NR09 4857 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms