RNA–Protein interactions for RNA: ENST00000618081.4

CCDC144B-208, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 1 (best) BASIC

Gene CCDC144B, Length 8,688 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-208ENST00000618081 AMN1Q8IY45 258 aa9.03□□□□□ -0.96
CCDC144B-208ENST00000618081 LYPD3O95274 346 aa9.03□□□□□ -0.96
CCDC144B-208ENST00000618081 TCTEX1D4Q5JR98 221 aa9.03□□□□□ -0.96
CCDC144B-208ENST00000618081 DKK4Q9UBT3 224 aa9.03□□□□□ -0.96
CCDC144B-208ENST00000618081 ARMS2P0C7Q2 107 aa9.03□□□□□ -0.96
CCDC144B-208ENST00000618081 TNRC6BQ9UPQ9 1833 aaKnown RBP9.03□□□□□ -0.96
CCDC144B-208ENST00000618081 H0YIZ8 118 aa9.03□□□□□ -0.96
CCDC144B-208ENST00000618081 ATP6V0E1O15342 81 aa9.03□□□□□ -0.96
CCDC144B-208ENST00000618081 PFN1P07737 140 aaKnown RBP9.03□□□□□ -0.96
CCDC144B-208ENST00000618081 FAM110DQ8TAY7 271 aaPredicted RBP9.03□□□□□ -0.96
CCDC144B-208ENST00000618081 hDV102S1A0JD36 115 aa9.02□□□□□ -0.96
CCDC144B-208ENST00000618081 Q6ZS49 121 aa9.02□□□□□ -0.96
CCDC144B-208ENST00000618081 Q86TA4 180 aa9.02□□□□□ -0.96
CCDC144B-208ENST00000618081 IGKV1-5P01602 117 aa9.02□□□□□ -0.97
CCDC144B-208ENST00000618081 IGHG3P01860 377 aa9.02□□□□□ -0.97
CCDC144B-208ENST00000618081 IGKV1-16P04430 117 aa9.02□□□□□ -0.97
CCDC144B-208ENST00000618081 RNASE2P10153 161 aaKnown RBP9.02□□□□□ -0.97
CCDC144B-208ENST00000618081 GAS1P54826 345 aa9.02□□□□□ -0.97
CCDC144B-208ENST00000618081 KIR3DS1Q14943 382 aa9.02□□□□□ -0.97
CCDC144B-208ENST00000618081 ALPK3Q96L96 1907 aa9.02□□□□□ -0.97
CCDC144B-208ENST00000618081 LY6HO94772 140 aa9.02□□□□□ -0.97
CCDC144B-208ENST00000618081 UBL5Q9BZL1 73 aa9.02□□□□□ -0.97
CCDC144B-208ENST00000618081 TMEM14BQ9NUH8 114 aa9.02□□□□□ -0.97
CCDC144B-208ENST00000618081 SMKR1H3BMG3 65 aa9.02□□□□□ -0.97
CCDC144B-208ENST00000618081 TP53TG1Q9Y2A0 90 aa9.02□□□□□ -0.97
CCDC144B-208ENST00000618081 ATRAIDQ6UW56 229 aa9.02□□□□□ -0.97
CCDC144B-208ENST00000618081 HIST3H2BBQ8N257 126 aa9.02□□□□□ -0.97
CCDC144B-208ENST00000618081 RPP25LQ8N5L8 163 aaKnown RBP9.02□□□□□ -0.97
CCDC144B-208ENST00000618081 TRBV20-1A0A075B6N2 111 aa9.02□□□□□ -0.97
CCDC144B-208ENST00000618081 C9JAW5 83 aa9.02□□□□□ -0.97
CCDC144B-208ENST00000618081 TRAV25A0A0B4J276 109 aa9.01□□□□□ -0.97
CCDC144B-208ENST00000618081 KLF5Q13887 457 aaPredicted RBP9.01□□□□□ -0.97
CCDC144B-208ENST00000618081 A0A1W2PPI3 338 aa9.01□□□□□ -0.97
CCDC144B-208ENST00000618081 CSPG4Q6UVK1 2322 aa9.01□□□□□ -0.97
CCDC144B-208ENST00000618081 GAGE12JA6NER3 117 aa9.01□□□□□ -0.97
CCDC144B-208ENST00000618081 GAGE1Q13065 139 aa9.01□□□□□ -0.97
CCDC144B-208ENST00000618081 GAGE4Q13068 117 aa9.01□□□□□ -0.97
CCDC144B-208ENST00000618081 GAGE5Q13069 117 aa9.01□□□□□ -0.97
CCDC144B-208ENST00000618081 A0A087WV48 116 aa9.01□□□□□ -0.97
CCDC144B-208ENST00000618081 PFN2P35080 140 aa9.01□□□□□ -0.97
CCDC144B-208ENST00000618081 C15orf62A8K5M9 175 aa9.01□□□□□ -0.97
CCDC144B-208ENST00000618081 FOXG1P55316 489 aaPredicted RBP9.01□□□□□ -0.97
CCDC144B-208ENST00000618081 ZNF362Q5T0B9 420 aaPredicted RBP9.01□□□□□ -0.97
CCDC144B-208ENST00000618081 COX11Q9Y6N1 276 aa9.01□□□□□ -0.97
CCDC144B-208ENST00000618081 IGHV3-16A0A0C4DH30 117 aa9□□□□□ -0.97
CCDC144B-208ENST00000618081 NDUFA4O00483 81 aa9□□□□□ -0.97
CCDC144B-208ENST00000618081 SPANXDQ9BXN6 97 aa9□□□□□ -0.97
CCDC144B-208ENST00000618081 J3QKU1 62 aa9□□□□□ -0.97
CCDC144B-208ENST00000618081 YPEL3P61236 119 aaPredicted RBP9□□□□□ -0.97
CCDC144B-208ENST00000618081 ZC2HC1BQ5TFG8 222 aa9□□□□□ -0.97
CCDC144B-208ENST00000618081 GFI1Q99684 422 aa9□□□□□ -0.97
CCDC144B-208ENST00000618081 TRAV13-2A0A0B4J235 113 aa9□□□□□ -0.97
CCDC144B-208ENST00000618081 CXCL1P09341 107 aa9□□□□□ -0.97
CCDC144B-208ENST00000618081 TSSC4Q9Y5U2 329 aaPredicted RBP9□□□□□ -0.97
CCDC144B-208ENST00000618081 hADV29S1A0JD25 119 aa9□□□□□ -0.97
CCDC144B-208ENST00000618081 PRSS46E5RG02 174 aa9□□□□□ -0.97
CCDC144B-208ENST00000618081 EFNA2O43921 213 aa9□□□□□ -0.97
CCDC144B-208ENST00000618081 IGHV1OR15-1A0A075B7D0 117 aa9□□□□□ -0.97
CCDC144B-208ENST00000618081 IGFL4Q6B9Z1 124 aa9□□□□□ -0.97
CCDC144B-208ENST00000618081 C8orf86Q6ZUL3 223 aa9□□□□□ -0.97
CCDC144B-208ENST00000618081 C17orf82Q86X59 251 aaPredicted RBP9□□□□□ -0.97
CCDC144B-208ENST00000618081 ANGP03950 147 aaKnown RBP9□□□□□ -0.97
CCDC144B-208ENST00000618081 HS3ST6Q96QI5 342 aa8.99□□□□□ -0.97
CCDC144B-208ENST00000618081 KLK9Q9UKQ9 250 aa8.99□□□□□ -0.97
CCDC144B-208ENST00000618081 ZNF134P52741 427 aa8.99□□□□□ -0.97
CCDC144B-208ENST00000618081 C1orf122Q6ZSJ8 110 aa8.99□□□□□ -0.97
CCDC144B-208ENST00000618081 IGF2BP2-AS1Q96M15 143 aa8.99□□□□□ -0.97
CCDC144B-208ENST00000618081 GAGE12BA1L429 117 aa8.99□□□□□ -0.97
CCDC144B-208ENST00000618081 CRLF1O75462 422 aa8.99□□□□□ -0.97
CCDC144B-208ENST00000618081 GAGE7O76087 117 aa8.99□□□□□ -0.97
CCDC144B-208ENST00000618081 GAGE12FP0CL80 117 aa8.99□□□□□ -0.97
CCDC144B-208ENST00000618081 GAGE12GP0CL81 117 aa8.99□□□□□ -0.97
CCDC144B-208ENST00000618081 GAGE12IP0CL82 117 aa8.99□□□□□ -0.97
CCDC144B-208ENST00000618081 NDUFS5O43920 106 aa8.99□□□□□ -0.97
CCDC144B-208ENST00000618081 PAX9P55771 341 aa8.99□□□□□ -0.97
CCDC144B-208ENST00000618081 TAL2Q16559 108 aa8.99□□□□□ -0.97
CCDC144B-208ENST00000618081 MRPL52Q86TS9 123 aaKnown RBP8.99□□□□□ -0.97
CCDC144B-208ENST00000618081 SCRT2Q9NQ03 307 aa8.99□□□□□ -0.97
CCDC144B-208ENST00000618081 UBE2BP63146 152 aa8.98□□□□□ -0.97
CCDC144B-208ENST00000618081 MAPK1IP1LQ8NDC0 245 aa8.98□□□□□ -0.97
CCDC144B-208ENST00000618081 PRRC2AP48634 2157 aaKnown RBP8.98□□□□□ -0.97
CCDC144B-208ENST00000618081 CFHR2P36980 270 aa8.98□□□□□ -0.97
CCDC144B-208ENST00000618081 ZNF833PQ6ZTB9 187 aa8.98□□□□□ -0.97
CCDC144B-208ENST00000618081 FAM231BA6NCW3 169 aa8.98□□□□□ -0.97
CCDC144B-208ENST00000618081 HERVK_113P63121 156 aa8.98□□□□□ -0.97
CCDC144B-208ENST00000618081 C8orf49Q96NF6 230 aa8.98□□□□□ -0.97
CCDC144B-208ENST00000618081 MST1P26927 711 aa8.98□□□□□ -0.97
CCDC144B-208ENST00000618081 GAGE6Q13070 117 aa8.98□□□□□ -0.97
CCDC144B-208ENST00000618081 B3GALT5-AS1P59052 145 aa8.98□□□□□ -0.97
CCDC144B-208ENST00000618081 CR1LQ2VPA4 569 aa8.98□□□□□ -0.97
CCDC144B-208ENST00000618081 Q8TCH9 128 aa8.97□□□□□ -0.97
CCDC144B-208ENST00000618081 ATG2AQ2TAZ0 1938 aa8.97□□□□□ -0.97
CCDC144B-208ENST00000618081 IGHV1-24A0A0C4DH33 117 aa8.97□□□□□ -0.97
CCDC144B-208ENST00000618081 TEX48A0A1B0GUV7 120 aa8.97□□□□□ -0.97
CCDC144B-208ENST00000618081 PRSS29PA6NIE9 313 aa8.97□□□□□ -0.97
CCDC144B-208ENST00000618081 Q71RC1 249 aaPredicted RBP8.97□□□□□ -0.97
CCDC144B-208ENST00000618081 ATP6V0BQ99437 205 aa8.97□□□□□ -0.97
CCDC144B-208ENST00000618081 MESP1Q9BRJ9 268 aa8.97□□□□□ -0.97
CCDC144B-208ENST00000618081 HLA-DRB4P13762 266 aa8.97□□□□□ -0.97
CCDC144B-208ENST00000618081 ANXA2RQ3ZCQ2 193 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms