RNA–Protein interactions for RNA: ENST00000616074.4

TRAPPC3-208, Transcript of trafficking protein particle complex 3, humanhuman

TSL 5 BASIC

Gene TRAPPC3, Length 1,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-208ENST00000616074 S100A11P31949 105 aa14.32□□□□□ -0.12
TRAPPC3-208ENST00000616074 KRTAP10-2P60368 255 aa14.32□□□□□ -0.12
TRAPPC3-208ENST00000616074 CD300CQ08708 224 aa14.32□□□□□ -0.12
TRAPPC3-208ENST00000616074 TMEM252Q8N6L7 170 aa14.32□□□□□ -0.12
TRAPPC3-208ENST00000616074 ZNF680Q8NEM1 530 aa14.32□□□□□ -0.12
TRAPPC3-208ENST00000616074 FAM19A4Q96LR4 140 aa14.32□□□□□ -0.12
TRAPPC3-208ENST00000616074 ZNF324O75467 553 aaPredicted RBP14.31□□□□□ -0.12
TRAPPC3-208ENST00000616074 HIST1H1EP10412 219 aaKnown RBP14.31□□□□□ -0.12
TRAPPC3-208ENST00000616074 FGF7P21781 194 aa14.31□□□□□ -0.12
TRAPPC3-208ENST00000616074 IL15RAQ13261 267 aa14.31□□□□□ -0.12
TRAPPC3-208ENST00000616074 RAB32Q13637 225 aa14.31□□□□□ -0.12
TRAPPC3-208ENST00000616074 STX12Q86Y82 276 aa14.31□□□□□ -0.12
TRAPPC3-208ENST00000616074 EXOC3-AS1Q8N2X6 119 aa14.31□□□□□ -0.12
TRAPPC3-208ENST00000616074 CHAC2Q8WUX2 184 aa14.31□□□□□ -0.12
TRAPPC3-208ENST00000616074 C18orf15Q96N68 181 aa14.31□□□□□ -0.12
TRAPPC3-208ENST00000616074 AGPAT4-IT1Q9H0P7 198 aa14.31□□□□□ -0.12
TRAPPC3-208ENST00000616074 TRGV1A0A0A0MS02 117 aa14.3□□□□□ -0.12
TRAPPC3-208ENST00000616074 BTF3P20290 206 aaKnown RBP14.3□□□□□ -0.12
TRAPPC3-208ENST00000616074 HBG1P69891 147 aa14.3□□□□□ -0.12
TRAPPC3-208ENST00000616074 HBG2P69892 147 aa14.3□□□□□ -0.12
TRAPPC3-208ENST00000616074 ANXA2RQ3ZCQ2 193 aa14.3□□□□□ -0.12
TRAPPC3-208ENST00000616074 EIF4E3Q8N5X7 224 aaKnown RBP14.3□□□□□ -0.12
TRAPPC3-208ENST00000616074 BLNKQ8WV28 456 aa14.3□□□□□ -0.12
TRAPPC3-208ENST00000616074 LINC00477Q96M19 166 aa14.3□□□□□ -0.12
TRAPPC3-208ENST00000616074 LINC00467Q9BRT7 94 aa14.3□□□□□ -0.12
TRAPPC3-208ENST00000616074 FUT9Q9Y231 359 aa14.3□□□□□ -0.12
TRAPPC3-208ENST00000616074 PRELID1Q9Y255 219 aa14.3□□□□□ -0.12
TRAPPC3-208ENST00000616074 TIMM9Q9Y5J7 89 aa14.3□□□□□ -0.12
TRAPPC3-208ENST00000616074 RNASE4P34096 147 aaKnown RBP14.29□□□□□ -0.12
TRAPPC3-208ENST00000616074 PDE6HQ13956 83 aa14.29□□□□□ -0.12
TRAPPC3-208ENST00000616074 GCSAMLQ5JQS6 135 aa14.29□□□□□ -0.12
TRAPPC3-208ENST00000616074 KLF12Q9Y4X4 402 aa14.29□□□□□ -0.12
TRAPPC3-208ENST00000616074 SPINK4O60575 86 aa14.28□□□□□ -0.12
TRAPPC3-208ENST00000616074 CRISP2P16562 243 aa14.28□□□□□ -0.12
TRAPPC3-208ENST00000616074 ATP6V1FQ16864 119 aa14.28□□□□□ -0.12
TRAPPC3-208ENST00000616074 Q8N1X5 172 aa14.28□□□□□ -0.12
TRAPPC3-208ENST00000616074 SLC25A2Q9BXI2 301 aa14.28□□□□□ -0.12
TRAPPC3-208ENST00000616074 NPCDR1Q9BY65 106 aa14.28□□□□□ -0.12
TRAPPC3-208ENST00000616074 GPN1Q9HCN4 374 aaPredicted RBP14.28□□□□□ -0.12
TRAPPC3-208ENST00000616074 IGKV2-40A0A087WW87 121 aaPredicted RBP14.27□□□□□ -0.13
TRAPPC3-208ENST00000616074 IGKV2D-40P01614 121 aaPredicted RBP14.27□□□□□ -0.13
TRAPPC3-208ENST00000616074 H2AFB2P0C5Z0 115 aa14.27□□□□□ -0.13
TRAPPC3-208ENST00000616074 TCL1AP56279 114 aa14.27□□□□□ -0.13
TRAPPC3-208ENST00000616074 LINC00315P59091 139 aa14.27□□□□□ -0.13
TRAPPC3-208ENST00000616074 PRR9Q5T870 116 aa14.27□□□□□ -0.13
TRAPPC3-208ENST00000616074 C9orf47Q6ZRZ4 202 aa14.27□□□□□ -0.13
TRAPPC3-208ENST00000616074 MPDU1O75352 247 aa14.26□□□□□ -0.13
TRAPPC3-208ENST00000616074 GPX1P07203 203 aa14.26□□□□□ -0.13
TRAPPC3-208ENST00000616074 ICAM4Q14773 271 aa14.26□□□□□ -0.13
TRAPPC3-208ENST00000616074 Q6ZQT7 251 aa14.26□□□□□ -0.13
TRAPPC3-208ENST00000616074 ZFAND2AQ8N6M9 145 aa14.26□□□□□ -0.13
TRAPPC3-208ENST00000616074 AAMDCQ9H7C9 122 aa14.26□□□□□ -0.13
TRAPPC3-208ENST00000616074 TP53TG3Q9ULZ0 132 aa14.26□□□□□ -0.13
TRAPPC3-208ENST00000616074 IBA57Q5T440 356 aaKnown RBP14.25□□□□□ -0.13
TRAPPC3-208ENST00000616074 FAM122CQ6P4D5 195 aa14.25□□□□□ -0.13
TRAPPC3-208ENST00000616074 Q6ZRN7 208 aaPredicted RBP14.25□□□□□ -0.13
TRAPPC3-208ENST00000616074 THAP6Q8TBB0 222 aa14.25□□□□□ -0.13
TRAPPC3-208ENST00000616074 FAM167A-AS1Q96KT0 104 aa14.25□□□□□ -0.13
TRAPPC3-208ENST00000616074 VGLL1Q99990 258 aa14.25□□□□□ -0.13
TRAPPC3-208ENST00000616074 SCRT2Q9NQ03 307 aa14.25□□□□□ -0.13
TRAPPC3-208ENST00000616074 RGS13O14921 159 aa14.24□□□□□ -0.13
TRAPPC3-208ENST00000616074 SIVA1O15304 175 aa14.24□□□□□ -0.13
TRAPPC3-208ENST00000616074 IGHV3-53P01767 116 aa14.24□□□□□ -0.13
TRAPPC3-208ENST00000616074 NMBP08949 121 aa14.24□□□□□ -0.13
TRAPPC3-208ENST00000616074 TMEM78Q5T7P6 136 aa14.24□□□□□ -0.13
TRAPPC3-208ENST00000616074 MIR17HGQ75NE6 70 aa14.24□□□□□ -0.13
TRAPPC3-208ENST00000616074 ST6GAL2Q96JF0 529 aa14.24□□□□□ -0.13
TRAPPC3-208ENST00000616074 MRPL16Q9NX20 251 aaKnown RBP14.24□□□□□ -0.13
TRAPPC3-208ENST00000616074 IGHV1OR15-1A0A075B7D0 117 aa14.23□□□□□ -0.13
TRAPPC3-208ENST00000616074 PAX4O43316 350 aa14.23□□□□□ -0.13
TRAPPC3-208ENST00000616074 NHLH2Q02577 135 aa14.23□□□□□ -0.13
TRAPPC3-208ENST00000616074 ZNF492Q9P255 531 aa14.23□□□□□ -0.13
TRAPPC3-208ENST00000616074 ICOSQ9Y6W8 199 aa14.23□□□□□ -0.13
TRAPPC3-208ENST00000616074 FAM240BA0A1B0GVZ2 78 aa14.22□□□□□ -0.13
TRAPPC3-208ENST00000616074 NXPH4O95158 308 aa14.22□□□□□ -0.13
TRAPPC3-208ENST00000616074 OR5C1Q8NGR4 320 aa14.22□□□□□ -0.13
TRAPPC3-208ENST00000616074 CCDC32Q9BV29 185 aa14.22□□□□□ -0.13
TRAPPC3-208ENST00000616074 NBEAP1P0C6P0 100 aa14.21□□□□□ -0.13
TRAPPC3-208ENST00000616074 Q8TAT8 98 aa14.21□□□□□ -0.13
TRAPPC3-208ENST00000616074 ARPC5LQ9BPX5 153 aa14.21□□□□□ -0.13
TRAPPC3-208ENST00000616074 OR51M1Q9H341 326 aa14.21□□□□□ -0.13
TRAPPC3-208ENST00000616074 OR10J4P0C629 311 aa14.2□□□□□ -0.14
TRAPPC3-208ENST00000616074 FXYD5Q96DB9 178 aa14.2□□□□□ -0.14
TRAPPC3-208ENST00000616074 PHYHIPLQ96FC7 376 aa14.2□□□□□ -0.14
TRAPPC3-208ENST00000616074 PRO0255Q9UI72 69 aa14.2□□□□□ -0.14
TRAPPC3-208ENST00000616074 ZNF138P52744 262 aa14.19□□□□□ -0.14
TRAPPC3-208ENST00000616074 CRYBA4P53673 196 aa14.19□□□□□ -0.14
TRAPPC3-208ENST00000616074 C8orf49Q96NF6 230 aa14.19□□□□□ -0.14
TRAPPC3-208ENST00000616074 PAXXQ9BUH6 204 aa14.19□□□□□ -0.14
TRAPPC3-208ENST00000616074 SIX6O95475 246 aa14.18□□□□□ -0.14
TRAPPC3-208ENST00000616074 ZNF415Q09FC8 603 aa14.18□□□□□ -0.14
TRAPPC3-208ENST00000616074 FHL2Q14192 279 aa14.18□□□□□ -0.14
TRAPPC3-208ENST00000616074 MRPL32Q9BYC8 188 aaKnown RBP14.18□□□□□ -0.14
TRAPPC3-208ENST00000616074 SLC25A31Q9H0C2 315 aa14.18□□□□□ -0.14
TRAPPC3-208ENST00000616074 OR5AC2Q9NZP5 309 aa14.18□□□□□ -0.14
TRAPPC3-208ENST00000616074 HHLA3Q9XRX5 114 aa14.18□□□□□ -0.14
TRAPPC3-208ENST00000616074 TNFRSF18Q9Y5U5 241 aa14.18□□□□□ -0.14
TRAPPC3-208ENST00000616074 FAT1Q14517 4588 aa14.17□□□□□ -0.14
TRAPPC3-208ENST00000616074 E5RGE8 158 aa14.17□□□□□ -0.14
TRAPPC3-208ENST00000616074 FUSP35637 526 aaKnown RBP eCLIP14.17□□□□□ -0.143e-8■□□□□ 8.2
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms