RNA–Protein interactions for RNA: ENST00000612540.1

PRKN-210, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 603 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-210ENST00000612540 STHQ8IWL8 128 aa9.51□□□□□ -0.89
PRKN-210ENST00000612540 DEFB125Q8N687 156 aa9.51□□□□□ -0.89
PRKN-210ENST00000612540 TMEM75Q8N9X5 138 aa9.51□□□□□ -0.89
PRKN-210ENST00000612540 Q8TAT8 98 aa9.51□□□□□ -0.89
PRKN-210ENST00000612540 C2CD4CQ8TF44 421 aa9.51□□□□□ -0.89
PRKN-210ENST00000612540 LINC00479Q96M42 142 aa9.51□□□□□ -0.89
PRKN-210ENST00000612540 CITED4Q96RK1 184 aa9.51□□□□□ -0.89
PRKN-210ENST00000612540 FAM110AQ9BQ89 295 aa9.51□□□□□ -0.89
PRKN-210ENST00000612540 DERL1Q9BUN8 251 aa9.51□□□□□ -0.89
PRKN-210ENST00000612540 SLC35B3Q9H1N7 401 aa9.51□□□□□ -0.89
PRKN-210ENST00000612540 SMDT1Q9H4I9 107 aa9.51□□□□□ -0.89
PRKN-210ENST00000612540 KMT2CQ8NEZ4 4911 aaKnown RBP9.5□□□□□ -0.89
PRKN-210ENST00000612540 NPIPB6E9PJ23 425 aa9.5□□□□□ -0.89
PRKN-210ENST00000612540 PRB2P02812 416 aaPredicted RBP9.5□□□□□ -0.89
PRKN-210ENST00000612540 SFTA3P0C7M3 94 aa9.5□□□□□ -0.89
PRKN-210ENST00000612540 HLA-DRB4P13762 266 aa9.5□□□□□ -0.89
PRKN-210ENST00000612540 RPL35P42766 123 aaKnown RBP9.5□□□□□ -0.89
PRKN-210ENST00000612540 FLI1Q01543 452 aaPredicted RBP9.5□□□□□ -0.89
PRKN-210ENST00000612540 NDUFA5Q16718 116 aa9.5□□□□□ -0.89
PRKN-210ENST00000612540 Q86TA4 180 aa9.5□□□□□ -0.89
PRKN-210ENST00000612540 FMC1Q96HJ9 113 aa9.5□□□□□ -0.89
PRKN-210ENST00000612540 ASCL2Q99929 193 aa9.5□□□□□ -0.89
PRKN-210ENST00000612540 NDFIP1Q9BT67 221 aa9.5□□□□□ -0.89
PRKN-210ENST00000612540 PARLQ9H300 379 aa9.5□□□□□ -0.89
PRKN-210ENST00000612540 SRD5A3Q9H8P0 318 aa9.5□□□□□ -0.89
PRKN-210ENST00000612540 C19orf73Q9NVV2 129 aa9.5□□□□□ -0.89
PRKN-210ENST00000612540 PSG8Q9UQ74 426 aa9.5□□□□□ -0.89
PRKN-210ENST00000612540 HLA-DRB4X5D2U9 266 aa9.5□□□□□ -0.89
PRKN-210ENST00000612540 H3BMM0 161 aa9.49□□□□□ -0.89
PRKN-210ENST00000612540 RPL35AP18077 110 aaKnown RBP9.49□□□□□ -0.89
PRKN-210ENST00000612540 ZNF138P52744 262 aa9.49□□□□□ -0.89
PRKN-210ENST00000612540 TMEM183BQ1AE95 376 aa9.49□□□□□ -0.89
PRKN-210ENST00000612540 SOHLH1Q5JUK2 328 aa9.49□□□□□ -0.89
PRKN-210ENST00000612540 C9orf47Q6ZRZ4 202 aa9.49□□□□□ -0.89
PRKN-210ENST00000612540 SLC7A5P1Q8MH63 180 aa9.49□□□□□ -0.89
PRKN-210ENST00000612540 SMIM7Q9BQ49 75 aa9.49□□□□□ -0.89
PRKN-210ENST00000612540 AGPAT4-IT1Q9H0P7 198 aa9.49□□□□□ -0.89
PRKN-210ENST00000612540 TUBA4BQ9H853 241 aa9.49□□□□□ -0.89
PRKN-210ENST00000612540 FBLL1A6NHQ2 334 aaKnown RBP9.48□□□□□ -0.89
PRKN-210ENST00000612540 ZNF727A8MUV8 499 aa9.48□□□□□ -0.89
PRKN-210ENST00000612540 J3KRW8 73 aa9.48□□□□□ -0.89
PRKN-210ENST00000612540 NDUFS6O75380 124 aaKnown RBP9.48□□□□□ -0.89
PRKN-210ENST00000612540 S100A9P06702 114 aaKnown RBP9.48□□□□□ -0.89
PRKN-210ENST00000612540 CENPWQ5EE01 88 aa9.48□□□□□ -0.89
PRKN-210ENST00000612540 EIF4E3Q8N5X7 224 aaKnown RBP9.48□□□□□ -0.89
PRKN-210ENST00000612540 LINC00477Q96M19 166 aa9.48□□□□□ -0.89
PRKN-210ENST00000612540 IGLV2-11P01706 119 aa9.47□□□□□ -0.89
PRKN-210ENST00000612540 CT45A10P0DMU9 189 aa9.47□□□□□ -0.89
PRKN-210ENST00000612540 LEPP41159 167 aa9.47□□□□□ -0.89
PRKN-210ENST00000612540 GNG4P50150 75 aa9.47□□□□□ -0.89
PRKN-210ENST00000612540 FXYD7P58549 80 aa9.47□□□□□ -0.89
PRKN-210ENST00000612540 TAS2R60P59551 318 aa9.47□□□□□ -0.89
PRKN-210ENST00000612540 BAGE2Q86Y30 109 aa9.47□□□□□ -0.89
PRKN-210ENST00000612540 Q8N1Y9 231 aa9.47□□□□□ -0.89
PRKN-210ENST00000612540 NHLRC2Q8NBF2 726 aa9.47□□□□□ -0.89
PRKN-210ENST00000612540 ZNF492Q9P255 531 aa9.47□□□□□ -0.89
PRKN-210ENST00000612540 KLF12Q9Y4X4 402 aa9.47□□□□□ -0.89
PRKN-210ENST00000612540 RBMY1BA6NDE4 496 aaKnown RBP9.46□□□□□ -0.9
PRKN-210ENST00000612540 RBMY1EA6NEQ0 496 aaKnown RBP9.46□□□□□ -0.9
PRKN-210ENST00000612540 RBMY1DP0C7P1 496 aaKnown RBP9.46□□□□□ -0.9
PRKN-210ENST00000612540 TSPOP30536 169 aa9.46□□□□□ -0.9
PRKN-210ENST00000612540 TRPT1Q86TN4 253 aaKnown RBP9.46□□□□□ -0.9
PRKN-210ENST00000612540 IGF2BP2-AS1Q96M15 143 aa9.46□□□□□ -0.9
PRKN-210ENST00000612540 TRBV6-1A0A0K0K1D8 114 aa9.45□□□□□ -0.9
PRKN-210ENST00000612540 TMEM218A2RU14 115 aa9.45□□□□□ -0.9
PRKN-210ENST00000612540 PGPEP1LA6NFU8 196 aa9.45□□□□□ -0.9
PRKN-210ENST00000612540 F8W036 122 aa9.45□□□□□ -0.9
PRKN-210ENST00000612540 M0R2Z0 102 aa9.45□□□□□ -0.9
PRKN-210ENST00000612540 LTAP01374 205 aa9.45□□□□□ -0.9
PRKN-210ENST00000612540 IGHV4-30-4P0DP06 118 aa9.45□□□□□ -0.9
PRKN-210ENST00000612540 MGST1P10620 155 aaKnown RBP9.45□□□□□ -0.9
PRKN-210ENST00000612540 NUTF2P61970 127 aaKnown RBP9.45□□□□□ -0.9
PRKN-210ENST00000612540 SPINK13Q1W4C9 94 aa9.45□□□□□ -0.9
PRKN-210ENST00000612540 FAM74A3Q4VXF1 159 aa9.45□□□□□ -0.9
PRKN-210ENST00000612540 C8orf49Q96NF6 230 aa9.45□□□□□ -0.9
PRKN-210ENST00000612540 AURKAIP1Q9NWT8 199 aaPredicted RBP9.45□□□□□ -0.9
PRKN-210ENST00000612540 ZFP30Q9Y2G7 519 aa9.45□□□□□ -0.9
PRKN-210ENST00000612540 RYR3Q15413 4870 aa9.45□□□□□ -0.9
PRKN-210ENST00000612540 DNAH9Q9NYC9 4486 aa9.44□□□□□ -0.9
PRKN-210ENST00000612540 TRBV20OR9-2A0A075B6H5 130 aa9.44□□□□□ -0.9
PRKN-210ENST00000612540 A8MTW9 85 aa9.44□□□□□ -0.9
PRKN-210ENST00000612540 SAPCD1Q5SSQ6 148 aa9.44□□□□□ -0.9
PRKN-210ENST00000612540 AMTNQ6UX39 209 aa9.44□□□□□ -0.9
PRKN-210ENST00000612540 MRAPQ8TCY5 172 aa9.44□□□□□ -0.9
PRKN-210ENST00000612540 TVP23CQ96ET8 276 aa9.44□□□□□ -0.9
PRKN-210ENST00000612540 ODF3Q96PU9 254 aa9.44□□□□□ -0.9
PRKN-210ENST00000612540 NIPSNAP3BQ9BS92 247 aa9.44□□□□□ -0.9
PRKN-210ENST00000612540 LENEPQ9Y5L5 61 aa9.44□□□□□ -0.9
PRKN-210ENST00000612540 TRAV12-2A0A075B6T6 113 aa9.43□□□□□ -0.9
PRKN-210ENST00000612540 LOC102724200A0A096LPH7 203 aaPredicted RBP9.43□□□□□ -0.9
PRKN-210ENST00000612540 C9JCJ5 164 aa9.43□□□□□ -0.9
PRKN-210ENST00000612540 GPX1P07203 203 aa9.43□□□□□ -0.9
PRKN-210ENST00000612540 RNASE4P34096 147 aaKnown RBP9.43□□□□□ -0.9
PRKN-210ENST00000612540 CDKN1BP46527 198 aa9.43□□□□□ -0.9
PRKN-210ENST00000612540 ADIRFQ15847 76 aa9.43□□□□□ -0.9
PRKN-210ENST00000612540 TMEM241Q24JQ0 296 aa9.43□□□□□ -0.9
PRKN-210ENST00000612540 SMUG1Q53HV7 270 aa9.43□□□□□ -0.9
PRKN-210ENST00000612540 PRR27Q6MZM9 219 aa9.43□□□□□ -0.9
PRKN-210ENST00000612540 TMEM183AQ8IXX5 376 aa9.43□□□□□ -0.9
PRKN-210ENST00000612540 CLUHP3Q96NS8 147 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms