RNA–Protein interactions for RNA: ENST00000612455.1

CCND3-222, Transcript of cyclin D3, human

Gene CCND3, Length 536 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCND3-222	ENST00000612455	OR10G4	Q8NGN3	311 aa		11.87	□□□□□ -0.51
CCND3-222	ENST00000612455	OR10G9	Q8NGN4	311 aa		11.87	□□□□□ -0.51
CCND3-222	ENST00000612455	OR10G7	Q8NGN6	311 aa		11.87	□□□□□ -0.51
CCND3-222	ENST00000612455	KMT2A	Q03164	3969 aa		11.86	□□□□□ -0.51
CCND3-222	ENST00000612455	FXYD6-FXYD2	A0A087WZ82	144 aa		11.86	□□□□□ -0.51
CCND3-222	ENST00000612455		A0A1W2PPV4	95 aa		11.86	□□□□□ -0.51
CCND3-222	ENST00000612455	KLLN	B2CW77	178 aa		11.86	□□□□□ -0.51
CCND3-222	ENST00000612455	SLC25A5	P05141	298 aa	Known RBP	11.86	□□□□□ -0.51
CCND3-222	ENST00000612455	UBE2L3	P68036	154 aa	Known RBP	11.86	□□□□□ -0.51
CCND3-222	ENST00000612455	C16orf74	Q96GX8	76 aa		11.86	□□□□□ -0.51
CCND3-222	ENST00000612455	VGLL1	Q99990	258 aa		11.86	□□□□□ -0.51
CCND3-222	ENST00000612455		Q9H3A6	140 aa		11.86	□□□□□ -0.51
CCND3-222	ENST00000612455	TRBV7-9	A0A0J9YWB2	115 aa		11.85	□□□□□ -0.51
CCND3-222	ENST00000612455	RBAKDN	A6NC62	111 aa		11.85	□□□□□ -0.51
CCND3-222	ENST00000612455	ZNF324	O75467	553 aa	Predicted RBP	11.85	□□□□□ -0.51
CCND3-222	ENST00000612455	EIF3G	O75821	320 aa	Known RBP eCLIP	11.85	□□□□□ -0.51
CCND3-222	ENST00000612455	RNASE8	Q8TDE3	154 aa	Known RBP	11.85	□□□□□ -0.51
CCND3-222	ENST00000612455	FAM210B	Q96KR6	192 aa		11.85	□□□□□ -0.51
CCND3-222	ENST00000612455	ZNF492	Q9P255	531 aa		11.85	□□□□□ -0.51
CCND3-222	ENST00000612455	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	11.84	□□□□□ -0.51
CCND3-222	ENST00000612455	TRAV12-3	A0A0B4J271	114 aa		11.84	□□□□□ -0.51
CCND3-222	ENST00000612455	IGKV2D-40	P01614	121 aa	Predicted RBP	11.84	□□□□□ -0.51
CCND3-222	ENST00000612455	MB	P02144	154 aa		11.84	□□□□□ -0.51
CCND3-222	ENST00000612455	STAG3L2	P0CL84	134 aa		11.84	□□□□□ -0.51
CCND3-222	ENST00000612455	STAG3L3	P0CL85	134 aa		11.84	□□□□□ -0.51
CCND3-222	ENST00000612455	DAD1	P61803	113 aa		11.84	□□□□□ -0.51
CCND3-222	ENST00000612455	RPL7L1	Q6DKI1	246 aa	Known RBP	11.84	□□□□□ -0.51
CCND3-222	ENST00000612455	ZFAND2A	Q8N6M9	145 aa		11.84	□□□□□ -0.51
CCND3-222	ENST00000612455	ARL6IP6	Q8N6S5	226 aa		11.84	□□□□□ -0.51
CCND3-222	ENST00000612455	SUN5	Q8TC36	379 aa		11.84	□□□□□ -0.51
CCND3-222	ENST00000612455	TMEM263	Q8WUH6	116 aa	Known RBP	11.84	□□□□□ -0.51
CCND3-222	ENST00000612455	LINC00467	Q9BRT7	94 aa		11.84	□□□□□ -0.51
CCND3-222	ENST00000612455	C7orf71	A4D174	169 aa		11.83	□□□□□ -0.52
CCND3-222	ENST00000612455		J3KRW8	73 aa		11.83	□□□□□ -0.52
CCND3-222	ENST00000612455	HTN1	P15515	57 aa		11.83	□□□□□ -0.52
CCND3-222	ENST00000612455	TMEM78	Q5T7P6	136 aa		11.83	□□□□□ -0.52
CCND3-222	ENST00000612455	RXFP4	Q8TDU9	374 aa		11.83	□□□□□ -0.52
CCND3-222	ENST00000612455	RAB24	Q969Q5	203 aa		11.83	□□□□□ -0.52
CCND3-222	ENST00000612455	GNPNAT1	Q96EK6	184 aa	Predicted RBP	11.83	□□□□□ -0.52
CCND3-222	ENST00000612455	PYGO2	Q9BRQ0	406 aa		11.83	□□□□□ -0.52
CCND3-222	ENST00000612455	OTOR	Q9NRC9	128 aa		11.83	□□□□□ -0.52
CCND3-222	ENST00000612455	TIMM8B	Q9Y5J9	83 aa	Predicted RBP	11.83	□□□□□ -0.52
CCND3-222	ENST00000612455	BORCS7-ASMT	A0A0B4J1R7	106 aa		11.82	□□□□□ -0.52
CCND3-222	ENST00000612455	PGP	A6NDG6	321 aa		11.82	□□□□□ -0.52
CCND3-222	ENST00000612455	DIRC3	C9JPN6	131 aa		11.82	□□□□□ -0.52
CCND3-222	ENST00000612455	CSN1S1	P47710	185 aa		11.82	□□□□□ -0.52
CCND3-222	ENST00000612455	CDC34	P49427	236 aa	Predicted RBP	11.82	□□□□□ -0.52
CCND3-222	ENST00000612455	ZNF138	P52744	262 aa		11.82	□□□□□ -0.52
CCND3-222	ENST00000612455	CD300C	Q08708	224 aa		11.82	□□□□□ -0.52
CCND3-222	ENST00000612455	NDUFAF3	Q9BU61	184 aa		11.82	□□□□□ -0.52
CCND3-222	ENST00000612455	SH3BGRL3	Q9H299	93 aa		11.82	□□□□□ -0.52
CCND3-222	ENST00000612455	TAAR5	O14804	337 aa		11.81	□□□□□ -0.52
CCND3-222	ENST00000612455	CCDC28A	Q8IWP9	274 aa		11.81	□□□□□ -0.52
CCND3-222	ENST00000612455	LINC00612	Q8N6U2	182 aa		11.81	□□□□□ -0.52
CCND3-222	ENST00000612455	CYTL1	Q9NRR1	136 aa		11.81	□□□□□ -0.52
CCND3-222	ENST00000612455	CBY3	A6NI87	242 aa		11.8	□□□□□ -0.52
CCND3-222	ENST00000612455	HMGB3	O15347	200 aa	Known RBP	11.8	□□□□□ -0.52
CCND3-222	ENST00000612455	GPX1	P07203	203 aa		11.8	□□□□□ -0.52
CCND3-222	ENST00000612455	ARL14EPL	P0DKL9	152 aa		11.8	□□□□□ -0.52
CCND3-222	ENST00000612455	RNASE4	P34096	147 aa	Known RBP	11.8	□□□□□ -0.52
CCND3-222	ENST00000612455	BTN1A1	Q13410	526 aa		11.8	□□□□□ -0.52
CCND3-222	ENST00000612455	ANXA2R	Q3ZCQ2	193 aa		11.8	□□□□□ -0.52
CCND3-222	ENST00000612455	PRR9	Q5T870	116 aa		11.8	□□□□□ -0.52
CCND3-222	ENST00000612455	TMED6	Q8WW62	240 aa		11.8	□□□□□ -0.52
CCND3-222	ENST00000612455	NOP10	Q9NPE3	64 aa	Known RBP	11.8	□□□□□ -0.52
CCND3-222	ENST00000612455	LENEP	Q9Y5L5	61 aa		11.8	□□□□□ -0.52
CCND3-222	ENST00000612455	DNAH6	Q9C0G6	4158 aa		11.79	□□□□□ -0.52
CCND3-222	ENST00000612455	ARPC5	O15511	151 aa		11.79	□□□□□ -0.52
CCND3-222	ENST00000612455	DEFB130B	P0DP73	79 aa		11.79	□□□□□ -0.52
CCND3-222	ENST00000612455	DEFB130A	P0DP74	79 aa		11.79	□□□□□ -0.52
CCND3-222	ENST00000612455	FAM74A1	Q5RGS3	127 aa		11.79	□□□□□ -0.52
CCND3-222	ENST00000612455	ACTR3C	Q9C0K3	210 aa	Predicted RBP	11.79	□□□□□ -0.52
CCND3-222	ENST00000612455	HMSD	A8MTL9	139 aa		11.78	□□□□□ -0.52
CCND3-222	ENST00000612455	SMLR1	H3BR10	107 aa		11.78	□□□□□ -0.52
CCND3-222	ENST00000612455	GCHFR	P30047	84 aa		11.78	□□□□□ -0.52
CCND3-222	ENST00000612455	DAZ2	Q13117	558 aa	Known RBP	11.78	□□□□□ -0.52
CCND3-222	ENST00000612455	SSX7	Q7RTT5	188 aa		11.78	□□□□□ -0.52
CCND3-222	ENST00000612455	OR11H4	Q8NGC9	324 aa		11.78	□□□□□ -0.52
CCND3-222	ENST00000612455	CXorf1	O96002	111 aa		11.77	□□□□□ -0.53
CCND3-222	ENST00000612455	HTN3	P15516	51 aa		11.77	□□□□□ -0.53
CCND3-222	ENST00000612455	ZNF345	Q14585	488 aa		11.77	□□□□□ -0.53
CCND3-222	ENST00000612455	ZNF726P1	Q15940	193 aa		11.77	□□□□□ -0.53
CCND3-222	ENST00000612455		Q6ZQT7	251 aa		11.77	□□□□□ -0.53
CCND3-222	ENST00000612455	KCNRG	Q8N5I3	272 aa		11.77	□□□□□ -0.53
CCND3-222	ENST00000612455	EIF4E3	Q8N5X7	224 aa	Known RBP	11.77	□□□□□ -0.53
CCND3-222	ENST00000612455	C11orf72	Q8NBR9	251 aa		11.77	□□□□□ -0.53
CCND3-222	ENST00000612455		Q8TAT8	98 aa		11.77	□□□□□ -0.53
CCND3-222	ENST00000612455	CMTM2	Q8TAZ6	248 aa		11.77	□□□□□ -0.53
CCND3-222	ENST00000612455	ST6GAL2	Q96JF0	529 aa		11.77	□□□□□ -0.53
CCND3-222	ENST00000612455	HYLS1	Q96M11	299 aa		11.77	□□□□□ -0.53
CCND3-222	ENST00000612455	SNURFL	B1AK76	121 aa		11.76	□□□□□ -0.53
CCND3-222	ENST00000612455	ATP5G1	P05496	136 aa		11.76	□□□□□ -0.53
CCND3-222	ENST00000612455	ATP5G3	P48201	142 aa		11.76	□□□□□ -0.53
CCND3-222	ENST00000612455	TMEM167B	Q9NRX6	74 aa		11.76	□□□□□ -0.53
CCND3-222	ENST00000612455	IGHV1OR15-1	A0A075B7D0	117 aa		11.75	□□□□□ -0.53
CCND3-222	ENST00000612455		P0DMU3	169 aa		11.75	□□□□□ -0.53
CCND3-222	ENST00000612455	FAM231A	P0DMU4	169 aa		11.75	□□□□□ -0.53
CCND3-222	ENST00000612455	FAM231C	P0DMU5	169 aa		11.75	□□□□□ -0.53
CCND3-222	ENST00000612455		Q6AWC8	147 aa		11.75	□□□□□ -0.53
CCND3-222	ENST00000612455	TMEM88	Q6PEY1	159 aa		11.75	□□□□□ -0.53

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