RNA–Protein interactions for RNA: ENST00000608957.5

LINC00539-204, long intergenic non-protein coding RNA 539, humanhuman

TSL 5 BASIC

Gene LINC00539, Length 869 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00539-204ENST00000608957 C9JCJ5 164 aa8.51□□□□□ -1.05
LINC00539-204ENST00000608957 SNAPINO95295 136 aa8.51□□□□□ -1.05
LINC00539-204ENST00000608957 TCRAP04437 139 aa8.51□□□□□ -1.05
LINC00539-204ENST00000608957 RPL35P42766 123 aaKnown RBP8.51□□□□□ -1.05
LINC00539-204ENST00000608957 CSN1S1P47710 185 aa8.51□□□□□ -1.05
LINC00539-204ENST00000608957 CNN1P51911 297 aaKnown RBP8.51□□□□□ -1.05
LINC00539-204ENST00000608957 RPL11P62913 178 aaKnown RBP8.51□□□□□ -1.05
LINC00539-204ENST00000608957 PNRC1Q12796 327 aaPredicted RBP8.51□□□□□ -1.05
LINC00539-204ENST00000608957 SAMD13Q5VXD3 122 aa8.51□□□□□ -1.05
LINC00539-204ENST00000608957 TVP23CQ96ET8 276 aa8.51□□□□□ -1.05
LINC00539-204ENST00000608957 OVOL2Q9BRP0 275 aa8.51□□□□□ -1.05
LINC00539-204ENST00000608957 NRN1Q9NPD7 142 aa8.51□□□□□ -1.05
LINC00539-204ENST00000608957 PRELID1Q9Y255 219 aa8.51□□□□□ -1.05
LINC00539-204ENST00000608957 IGKV3-7A0A075B6H7 116 aa8.5□□□□□ -1.05
LINC00539-204ENST00000608957 TRAV8-2A0A0B4J237 113 aa8.5□□□□□ -1.05
LINC00539-204ENST00000608957 M0R036 132 aa8.5□□□□□ -1.05
LINC00539-204ENST00000608957 M0R3E3 92 aa8.5□□□□□ -1.05
LINC00539-204ENST00000608957 SOCS3O14543 225 aa8.5□□□□□ -1.05
LINC00539-204ENST00000608957 HLA-DMBP28068 263 aa8.5□□□□□ -1.05
LINC00539-204ENST00000608957 TFPI2P48307 235 aa8.5□□□□□ -1.05
LINC00539-204ENST00000608957 TMEM241Q24JQ0 296 aa8.5□□□□□ -1.05
LINC00539-204ENST00000608957 APRG1Q8IVJ8 170 aa8.5□□□□□ -1.05
LINC00539-204ENST00000608957 ARL6IP6Q8N6S5 226 aa8.5□□□□□ -1.05
LINC00539-204ENST00000608957 CLRN3Q8NCR9 226 aa8.5□□□□□ -1.05
LINC00539-204ENST00000608957 MRPL53Q96EL3 112 aaKnown RBP8.5□□□□□ -1.05
LINC00539-204ENST00000608957 C16orf92Q96LL3 132 aa8.5□□□□□ -1.05
LINC00539-204ENST00000608957 SDF2L1Q9HCN8 221 aa8.5□□□□□ -1.05
LINC00539-204ENST00000608957 CLEC5AQ9NY25 188 aa8.5□□□□□ -1.05
LINC00539-204ENST00000608957 TRBV20OR9-2A0A075B6H5 130 aa8.49□□□□□ -1.05
LINC00539-204ENST00000608957 SERTM2A0A1B0GWG4 89 aa8.49□□□□□ -1.05
LINC00539-204ENST00000608957 OR4C46A6NHA9 309 aa8.49□□□□□ -1.05
LINC00539-204ENST00000608957 DIRC3C9JPN6 131 aa8.49□□□□□ -1.05
LINC00539-204ENST00000608957 S100A9P06702 114 aaKnown RBP8.49□□□□□ -1.05
LINC00539-204ENST00000608957 TAS2R60P59551 318 aa8.49□□□□□ -1.05
LINC00539-204ENST00000608957 UBE2G1P62253 170 aa8.49□□□□□ -1.05
LINC00539-204ENST00000608957 ADIRFQ15847 76 aa8.49□□□□□ -1.05
LINC00539-204ENST00000608957 TMEM183BQ1AE95 376 aa8.49□□□□□ -1.05
LINC00539-204ENST00000608957 CENPWQ5EE01 88 aa8.49□□□□□ -1.05
LINC00539-204ENST00000608957 IGFL4Q6B9Z1 124 aa8.49□□□□□ -1.05
LINC00539-204ENST00000608957 GOLT1AQ6ZVE7 132 aa8.49□□□□□ -1.05
LINC00539-204ENST00000608957 GBGT1Q8N5D6 347 aa8.49□□□□□ -1.05
LINC00539-204ENST00000608957 FAM24BQ8N5W8 94 aa8.49□□□□□ -1.05
LINC00539-204ENST00000608957 FMC1Q96HJ9 113 aa8.49□□□□□ -1.05
LINC00539-204ENST00000608957 IGF2BP2-AS1Q96M15 143 aa8.49□□□□□ -1.05
LINC00539-204ENST00000608957 SACSQ9NZJ4 4579 aa8.49□□□□□ -1.05
LINC00539-204ENST00000608957 TRAV34A0A0B4J273 112 aa8.48□□□□□ -1.05
LINC00539-204ENST00000608957 K7EQM0 130 aa8.48□□□□□ -1.05
LINC00539-204ENST00000608957 ISLRO14498 428 aa8.48□□□□□ -1.05
LINC00539-204ENST00000608957 RPL35AP18077 110 aaKnown RBP8.48□□□□□ -1.05
LINC00539-204ENST00000608957 GNG4P50150 75 aa8.48□□□□□ -1.05
LINC00539-204ENST00000608957 RPL23P62829 140 aaKnown RBP8.48□□□□□ -1.05
LINC00539-204ENST00000608957 RHEBQ15382 184 aa8.48□□□□□ -1.05
LINC00539-204ENST00000608957 ATRAIDQ6UW56 229 aa8.48□□□□□ -1.05
LINC00539-204ENST00000608957 Q86TA4 180 aa8.48□□□□□ -1.05
LINC00539-204ENST00000608957 RNF182Q8N6D2 247 aa8.48□□□□□ -1.05
LINC00539-204ENST00000608957 TMEM75Q8N9X5 138 aa8.48□□□□□ -1.05
LINC00539-204ENST00000608957 DCANP1Q8TF63 244 aa8.48□□□□□ -1.05
LINC00539-204ENST00000608957 LINC00479Q96M42 142 aa8.48□□□□□ -1.05
LINC00539-204ENST00000608957 MS4A6AQ9H2W1 248 aa8.48□□□□□ -1.05
LINC00539-204ENST00000608957 MAP6D1Q9H9H5 199 aa8.48□□□□□ -1.05
LINC00539-204ENST00000608957 KLF12Q9Y4X4 402 aa8.48□□□□□ -1.05
LINC00539-204ENST00000608957 LY96Q9Y6Y9 160 aa8.48□□□□□ -1.05
LINC00539-204ENST00000608957 IGKV2-40A0A087WW87 121 aaPredicted RBP8.47□□□□□ -1.05
LINC00539-204ENST00000608957 TRBV6-1A0A0K0K1D8 114 aa8.47□□□□□ -1.05
LINC00539-204ENST00000608957 PGPEP1LA6NFU8 196 aa8.47□□□□□ -1.05
LINC00539-204ENST00000608957 IGKV2D-40P01614 121 aaPredicted RBP8.47□□□□□ -1.05
LINC00539-204ENST00000608957 PSG3Q16557 428 aa8.47□□□□□ -1.05
LINC00539-204ENST00000608957 DEFB135Q30KP9 77 aa8.47□□□□□ -1.05
LINC00539-204ENST00000608957 LINC01551Q86U37 167 aa8.47□□□□□ -1.05
LINC00539-204ENST00000608957 WFDC3Q8IUB2 231 aa8.47□□□□□ -1.05
LINC00539-204ENST00000608957 C20orf173Q96LM9 149 aa8.47□□□□□ -1.05
LINC00539-204ENST00000608957 TRAV8-1A0A0A6YYK1 113 aa8.46□□□□□ -1.06
LINC00539-204ENST00000608957 FBLL1A6NHQ2 334 aaKnown RBP8.46□□□□□ -1.06
LINC00539-204ENST00000608957 ZNF705FA8MVS1 300 aaPredicted RBP8.46□□□□□ -1.06
LINC00539-204ENST00000608957 B4DEV8 164 aa8.46□□□□□ -1.06
LINC00539-204ENST00000608957 K7EQG2 157 aa8.46□□□□□ -1.06
LINC00539-204ENST00000608957 DNASE2O00115 360 aaPredicted RBP8.46□□□□□ -1.06
LINC00539-204ENST00000608957 IGLV2-11P01706 119 aa8.46□□□□□ -1.06
LINC00539-204ENST00000608957 PRB4P10163 310 aaPredicted RBP8.46□□□□□ -1.06
LINC00539-204ENST00000608957 ID1P41134 155 aa8.46□□□□□ -1.06
LINC00539-204ENST00000608957 PAFAH1B2P68402 229 aa8.46□□□□□ -1.06
LINC00539-204ENST00000608957 FLI1Q01543 452 aaPredicted RBP8.46□□□□□ -1.06
LINC00539-204ENST00000608957 BAGE2Q86Y30 109 aa8.46□□□□□ -1.06
LINC00539-204ENST00000608957 ZNF738Q8NE65 137 aa8.46□□□□□ -1.06
LINC00539-204ENST00000608957 SMIM12Q96EX1 92 aa8.46□□□□□ -1.06
LINC00539-204ENST00000608957 SGK494Q96LW2 274 aa8.46□□□□□ -1.06
LINC00539-204ENST00000608957 TRAV2A0A0B4J234 112 aa8.45□□□□□ -1.06
LINC00539-204ENST00000608957 KIR2DL5BA0A0G2JN68 375 aa8.45□□□□□ -1.06
LINC00539-204ENST00000608957 KIR2DL5BA0A0G2JPC4 375 aa8.45□□□□□ -1.06
LINC00539-204ENST00000608957 C7orf77A4D0Y5 90 aa8.45□□□□□ -1.06
LINC00539-204ENST00000608957 RBAKDNA6NC62 111 aa8.45□□□□□ -1.06
LINC00539-204ENST00000608957 PRAC2D3DTV9 90 aa8.45□□□□□ -1.06
LINC00539-204ENST00000608957 SCO1O75880 301 aa8.45□□□□□ -1.06
LINC00539-204ENST00000608957 LTAP01374 205 aa8.45□□□□□ -1.06
LINC00539-204ENST00000608957 APOC4P55056 127 aa8.45□□□□□ -1.06
LINC00539-204ENST00000608957 Q6ZWC4 215 aa8.45□□□□□ -1.06
LINC00539-204ENST00000608957 PRNTQ86SH4 94 aa8.45□□□□□ -1.06
LINC00539-204ENST00000608957 KIR2DL5AQ8N109 375 aa8.45□□□□□ -1.06
LINC00539-204ENST00000608957 KIR2DL5BQ8NHK3 375 aa8.45□□□□□ -1.06
LINC00539-204ENST00000608957 OCC1Q8TAD7 63 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms