RNA–Protein interactions for RNA: ENST00000604164.5

CCDC12-209, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 399 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-209ENST00000604164 GNPNAT1Q96EK6 184 aaPredicted RBP8.23□□□□□ -1.09
CCDC12-209ENST00000604164 Q9H3A6 140 aa8.23□□□□□ -1.09
CCDC12-209ENST00000604164 TRAV12-3A0A0B4J271 114 aa8.22□□□□□ -1.09
CCDC12-209ENST00000604164 SNURFLB1AK76 121 aa8.22□□□□□ -1.09
CCDC12-209ENST00000604164 J3KRW8 73 aa8.22□□□□□ -1.09
CCDC12-209ENST00000604164 GPX1P07203 203 aa8.22□□□□□ -1.09
CCDC12-209ENST00000604164 HTN3P15516 51 aa8.22□□□□□ -1.09
CCDC12-209ENST00000604164 CRISP2P16562 243 aa8.22□□□□□ -1.09
CCDC12-209ENST00000604164 ERCC8Q13216 396 aa8.22□□□□□ -1.09
CCDC12-209ENST00000604164 ARL6IP6Q8N6S5 226 aa8.22□□□□□ -1.09
CCDC12-209ENST00000604164 HSD17B11Q8NBQ5 300 aa8.22□□□□□ -1.09
CCDC12-209ENST00000604164 RNASE8Q8TDE3 154 aaKnown RBP8.22□□□□□ -1.09
CCDC12-209ENST00000604164 PHYHIPLQ96FC7 376 aa8.22□□□□□ -1.09
CCDC12-209ENST00000604164 AGPAT4-IT1Q9H0P7 198 aa8.22□□□□□ -1.09
CCDC12-209ENST00000604164 OTORQ9NRC9 128 aa8.22□□□□□ -1.09
CCDC12-209ENST00000604164 IGKV2-40A0A087WW87 121 aaPredicted RBP8.21□□□□□ -1.1
CCDC12-209ENST00000604164 CBY3A6NI87 242 aa8.21□□□□□ -1.1
CCDC12-209ENST00000604164 KLLNB2CW77 178 aa8.21□□□□□ -1.1
CCDC12-209ENST00000604164 TAAR5O14804 337 aa8.21□□□□□ -1.1
CCDC12-209ENST00000604164 IGKV2D-40P01614 121 aaPredicted RBP8.21□□□□□ -1.1
CCDC12-209ENST00000604164 ATP5G1P05496 136 aa8.21□□□□□ -1.1
CCDC12-209ENST00000604164 DEFB130BP0DP73 79 aa8.21□□□□□ -1.1
CCDC12-209ENST00000604164 DEFB130AP0DP74 79 aa8.21□□□□□ -1.1
CCDC12-209ENST00000604164 PRB4P10163 310 aaPredicted RBP8.21□□□□□ -1.1
CCDC12-209ENST00000604164 AZU1P20160 251 aa8.21□□□□□ -1.1
CCDC12-209ENST00000604164 ATP5G3P48201 142 aa8.21□□□□□ -1.1
CCDC12-209ENST00000604164 CDC34P49427 236 aaPredicted RBP8.21□□□□□ -1.1
CCDC12-209ENST00000604164 ZNF138P52744 262 aa8.21□□□□□ -1.1
CCDC12-209ENST00000604164 C15orf53Q8NAA6 179 aa8.21□□□□□ -1.1
CCDC12-209ENST00000604164 ZNF680Q8NEM1 530 aa8.21□□□□□ -1.1
CCDC12-209ENST00000604164 ZNF503Q96F45 646 aa8.21□□□□□ -1.1
CCDC12-209ENST00000604164 FAM19A4Q96LR4 140 aa8.21□□□□□ -1.1
CCDC12-209ENST00000604164 LINC00467Q9BRT7 94 aa8.21□□□□□ -1.1
CCDC12-209ENST00000604164 ZNF492Q9P255 531 aa8.21□□□□□ -1.1
CCDC12-209ENST00000604164 TNFSF18Q9UNG2 199 aa8.21□□□□□ -1.1
CCDC12-209ENST00000604164 LENEPQ9Y5L5 61 aa8.21□□□□□ -1.1
CCDC12-209ENST00000604164 PLAC8L1A1L4L8 177 aa8.2□□□□□ -1.1
CCDC12-209ENST00000604164 ATP6V0CP27449 155 aa8.2□□□□□ -1.1
CCDC12-209ENST00000604164 RNASE4P34096 147 aaKnown RBP8.2□□□□□ -1.1
CCDC12-209ENST00000604164 RAB2AP61019 212 aa8.2□□□□□ -1.1
CCDC12-209ENST00000604164 Q5BKY6 102 aa8.2□□□□□ -1.1
CCDC12-209ENST00000604164 TMED6Q8WW62 240 aa8.2□□□□□ -1.1
CCDC12-209ENST00000604164 VGLL1Q99990 258 aa8.2□□□□□ -1.1
CCDC12-209ENST00000604164 ACTR3CQ9C0K3 210 aaPredicted RBP8.2□□□□□ -1.1
CCDC12-209ENST00000604164 NOP10Q9NPE3 64 aaKnown RBP8.2□□□□□ -1.1
CCDC12-209ENST00000604164 RYR3Q15413 4870 aa8.19□□□□□ -1.1
CCDC12-209ENST00000604164 SERTM2A0A1B0GWG4 89 aa8.19□□□□□ -1.1
CCDC12-209ENST00000604164 RNF222A6NCQ9 220 aa8.19□□□□□ -1.1
CCDC12-209ENST00000604164 PGPA6NDG6 321 aa8.19□□□□□ -1.1
CCDC12-209ENST00000604164 DIRC3C9JPN6 131 aa8.19□□□□□ -1.1
CCDC12-209ENST00000604164 RGS13O14921 159 aa8.19□□□□□ -1.1
CCDC12-209ENST00000604164 CXorf1O96002 111 aa8.19□□□□□ -1.1
CCDC12-209ENST00000604164 PRM2P04554 102 aa8.19□□□□□ -1.1
CCDC12-209ENST00000604164 KIR3DS1Q14943 382 aa8.19□□□□□ -1.1
CCDC12-209ENST00000604164 ANXA2RQ3ZCQ2 193 aa8.19□□□□□ -1.1
CCDC12-209ENST00000604164 EIF4E3Q8N5X7 224 aaKnown RBP8.19□□□□□ -1.1
CCDC12-209ENST00000604164 HYLS1Q96M11 299 aa8.19□□□□□ -1.1
CCDC12-209ENST00000604164 TMEM167BQ9NRX6 74 aa8.19□□□□□ -1.1
CCDC12-209ENST00000604164 DYNC2H1Q8NCM8 4307 aaKnown RBP8.19□□□□□ -1.1
CCDC12-209ENST00000604164 F5H768 121 aa8.18□□□□□ -1.1
CCDC12-209ENST00000604164 K7EQM0 130 aa8.18□□□□□ -1.1
CCDC12-209ENST00000604164 ZNF324O75467 553 aaPredicted RBP8.18□□□□□ -1.1
CCDC12-209ENST00000604164 STAG3L2P0CL84 134 aa8.18□□□□□ -1.1
CCDC12-209ENST00000604164 STAG3L3P0CL85 134 aa8.18□□□□□ -1.1
CCDC12-209ENST00000604164 ARL14EPLP0DKL9 152 aa8.18□□□□□ -1.1
CCDC12-209ENST00000604164 DAZ2Q13117 558 aaKnown RBP8.18□□□□□ -1.1
CCDC12-209ENST00000604164 BTN1A1Q13410 526 aa8.18□□□□□ -1.1
CCDC12-209ENST00000604164 UBE2DNLQ8IWF7 75 aa8.18□□□□□ -1.1
CCDC12-209ENST00000604164 ZFAND2AQ8N6M9 145 aa8.18□□□□□ -1.1
CCDC12-209ENST00000604164 POM121L12Q8N7R1 296 aa8.18□□□□□ -1.1
CCDC12-209ENST00000604164 RAB24Q969Q5 203 aa8.18□□□□□ -1.1
CCDC12-209ENST00000604164 LYSTQ99698 3801 aa8.18□□□□□ -1.1
CCDC12-209ENST00000604164 PLA2G2EQ9NZK7 142 aa8.18□□□□□ -1.1
CCDC12-209ENST00000604164 ARPC5O15511 151 aa8.17□□□□□ -1.1
CCDC12-209ENST00000604164 GCHFRP30047 84 aa8.17□□□□□ -1.1
CCDC12-209ENST00000604164 CD300CQ08708 224 aa8.17□□□□□ -1.1
CCDC12-209ENST00000604164 AKR1C8PQ5T2L2 129 aa8.17□□□□□ -1.1
CCDC12-209ENST00000604164 IBA57Q5T440 356 aaKnown RBP8.17□□□□□ -1.1
CCDC12-209ENST00000604164 RPL7L1Q6DKI1 246 aaKnown RBP8.17□□□□□ -1.1
CCDC12-209ENST00000604164 TMEM88Q6PEY1 159 aa8.17□□□□□ -1.1
CCDC12-209ENST00000604164 ST6GAL2Q96JF0 529 aa8.17□□□□□ -1.1
CCDC12-209ENST00000604164 ARPC5LQ9BPX5 153 aa8.17□□□□□ -1.1
CCDC12-209ENST00000604164 IGHV1OR15-1A0A075B7D0 117 aa8.16□□□□□ -1.1
CCDC12-209ENST00000604164 HMGB3O15347 200 aaKnown RBP8.16□□□□□ -1.1
CCDC12-209ENST00000604164 FAM3BP58499 235 aaPredicted RBP8.16□□□□□ -1.1
CCDC12-209ENST00000604164 RNF212Q495C1 297 aa8.16□□□□□ -1.1
CCDC12-209ENST00000604164 LINC00612Q8N6U2 182 aa8.16□□□□□ -1.1
CCDC12-209ENST00000604164 C5orf17Q8NAS9 161 aa8.16□□□□□ -1.1
CCDC12-209ENST00000604164 Q8TAT8 98 aa8.16□□□□□ -1.1
CCDC12-209ENST00000604164 NDFIP1Q9BT67 221 aa8.16□□□□□ -1.1
CCDC12-209ENST00000604164 SH3BGRL3Q9H299 93 aa8.16□□□□□ -1.1
CCDC12-209ENST00000604164 RPH3ALQ9UNE2 315 aa8.16□□□□□ -1.1
CCDC12-209ENST00000604164 RYR2Q92736 4967 aa8.16□□□□□ -1.1
CCDC12-209ENST00000604164 TRGV2A0A075B6R0 118 aa8.15□□□□□ -1.1
CCDC12-209ENST00000604164 GAGE12BA1L429 117 aa8.15□□□□□ -1.1
CCDC12-209ENST00000604164 FBLL1A6NHQ2 334 aaKnown RBP8.15□□□□□ -1.1
CCDC12-209ENST00000604164 GAGE7O76087 117 aa8.15□□□□□ -1.1
CCDC12-209ENST00000604164 GAGE12FP0CL80 117 aa8.15□□□□□ -1.1
CCDC12-209ENST00000604164 GAGE12GP0CL81 117 aa8.15□□□□□ -1.1
CCDC12-209ENST00000604164 GAGE12IP0CL82 117 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms