RNA–Protein interactions for RNA: ENST00000601524.5

LINC02028-214, Transcript of long intergenic non-protein coding RNA 2028, human

TSL 5

Gene LINC02028, Length 616 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC02028-214	ENST00000601524	NFE4	Q86UQ8	179 aa		11.47	□□□□□ -0.57
LINC02028-214	ENST00000601524	C20orf173	Q96LM9	149 aa		11.47	□□□□□ -0.57
LINC02028-214	ENST00000601524	LINC01587	Q99440	93 aa		11.47	□□□□□ -0.57
LINC02028-214	ENST00000601524	NPCDR1	Q9BY65	106 aa		11.47	□□□□□ -0.57
LINC02028-214	ENST00000601524	FABP1	P07148	127 aa		11.46	□□□□□ -0.57
LINC02028-214	ENST00000601524	HTN1	P15515	57 aa		11.46	□□□□□ -0.57
LINC02028-214	ENST00000601524	PLP1	P60201	277 aa		11.46	□□□□□ -0.57
LINC02028-214	ENST00000601524	GCSAML	Q5JQS6	135 aa		11.46	□□□□□ -0.57
LINC02028-214	ENST00000601524	MORN5	Q5VZ52	161 aa		11.46	□□□□□ -0.57
LINC02028-214	ENST00000601524	BAP18	Q8IXM2	172 aa		11.46	□□□□□ -0.57
LINC02028-214	ENST00000601524	TMEM37	Q8WXS4	190 aa		11.46	□□□□□ -0.57
LINC02028-214	ENST00000601524	NOP10	Q9NPE3	64 aa	Known RBP	11.46	□□□□□ -0.57
LINC02028-214	ENST00000601524	PXMP4	Q9Y6I8	212 aa		11.46	□□□□□ -0.57
LINC02028-214	ENST00000601524	HMSD	A8MTL9	139 aa		11.45	□□□□□ -0.58
LINC02028-214	ENST00000601524	OR5G3	P0C626	314 aa		11.45	□□□□□ -0.58
LINC02028-214	ENST00000601524	HOXA5	P20719	270 aa		11.45	□□□□□ -0.58
LINC02028-214	ENST00000601524	RPL29	P47914	159 aa	Known RBP	11.45	□□□□□ -0.58
LINC02028-214	ENST00000601524	SELENOT	P62341	195 aa		11.45	□□□□□ -0.58
LINC02028-214	ENST00000601524	RPL7L1	Q6DKI1	246 aa	Known RBP	11.45	□□□□□ -0.58
LINC02028-214	ENST00000601524	C16orf74	Q96GX8	76 aa		11.45	□□□□□ -0.58
LINC02028-214	ENST00000601524	C16orf92	Q96LL3	132 aa		11.45	□□□□□ -0.58
LINC02028-214	ENST00000601524	CYTL1	Q9NRR1	136 aa		11.45	□□□□□ -0.58
LINC02028-214	ENST00000601524	SLC39A9	Q9NUM3	307 aa		11.45	□□□□□ -0.58
LINC02028-214	ENST00000601524	TRAV12-2	A0A075B6T6	113 aa		11.44	□□□□□ -0.58
LINC02028-214	ENST00000601524		H3BNG1	76 aa		11.44	□□□□□ -0.58
LINC02028-214	ENST00000601524	HYPM	O75409	117 aa		11.44	□□□□□ -0.58
LINC02028-214	ENST00000601524	DUSP14	O95147	198 aa	Known RBP	11.44	□□□□□ -0.58
LINC02028-214	ENST00000601524	CNN1	P51911	297 aa	Known RBP	11.44	□□□□□ -0.58
LINC02028-214	ENST00000601524	LGALSL	Q3ZCW2	172 aa	Predicted RBP	11.44	□□□□□ -0.58
LINC02028-214	ENST00000601524	SAMD13	Q5VXD3	122 aa		11.44	□□□□□ -0.58
LINC02028-214	ENST00000601524	KCNRG	Q8N5I3	272 aa		11.44	□□□□□ -0.58
LINC02028-214	ENST00000601524	LRP1	Q07954	4544 aa	Known RBP	11.43	□□□□□ -0.58
LINC02028-214	ENST00000601524	TRAV5	A0A0B4J249	113 aa		11.43	□□□□□ -0.58
LINC02028-214	ENST00000601524	ZNF98	A6NK75	572 aa		11.43	□□□□□ -0.58
LINC02028-214	ENST00000601524	MPDU1	O75352	247 aa		11.43	□□□□□ -0.58
LINC02028-214	ENST00000601524	CFD	P00746	253 aa	Predicted RBP	11.43	□□□□□ -0.58
LINC02028-214	ENST00000601524	C1QB	P02746	253 aa		11.43	□□□□□ -0.58
LINC02028-214	ENST00000601524	TAS2R60	P59551	318 aa		11.43	□□□□□ -0.58
LINC02028-214	ENST00000601524	RAB31	Q13636	194 aa		11.43	□□□□□ -0.58
LINC02028-214	ENST00000601524	C1orf194	Q5T5A4	169 aa		11.43	□□□□□ -0.58
LINC02028-214	ENST00000601524	HSD17B11	Q8NBQ5	300 aa		11.43	□□□□□ -0.58
LINC02028-214	ENST00000601524	SCGB1C1	Q8TD33	95 aa		11.43	□□□□□ -0.58
LINC02028-214	ENST00000601524	PPP1R14B	Q96C90	147 aa		11.43	□□□□□ -0.58
LINC02028-214	ENST00000601524	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	11.43	□□□□□ -0.58
LINC02028-214	ENST00000601524	SH3BGRL3	Q9H299	93 aa		11.43	□□□□□ -0.58
LINC02028-214	ENST00000601524	ARV1	Q9H2C2	271 aa		11.43	□□□□□ -0.58
LINC02028-214	ENST00000601524	SLC25A22	Q9H936	323 aa		11.43	□□□□□ -0.58
LINC02028-214	ENST00000601524	HIGD1A	Q9Y241	93 aa		11.43	□□□□□ -0.58
LINC02028-214	ENST00000601524	IGLV5-52	A0A0A0MRZ9	124 aa		11.42	□□□□□ -0.58
LINC02028-214	ENST00000601524		H3BRN7	92 aa		11.42	□□□□□ -0.58
LINC02028-214	ENST00000601524	EIF3G	O75821	320 aa	Known RBP eCLIP	11.42	□□□□□ -0.58
LINC02028-214	ENST00000601524	OR8I2	Q8N0Y5	310 aa		11.42	□□□□□ -0.58
LINC02028-214	ENST00000601524	PARD6G	Q9BYG4	376 aa	Predicted RBP	11.42	□□□□□ -0.58
LINC02028-214	ENST00000601524	SLC25A32	Q9H2D1	315 aa		11.42	□□□□□ -0.58
LINC02028-214	ENST00000601524	COX7A2P2	O60397	106 aa		11.41	□□□□□ -0.58
LINC02028-214	ENST00000601524	NXPH4	O95158	308 aa		11.41	□□□□□ -0.58
LINC02028-214	ENST00000601524	SNRPC	P09234	159 aa	Known RBP	11.41	□□□□□ -0.58
LINC02028-214	ENST00000601524	ATP6V0C	P27449	155 aa		11.41	□□□□□ -0.58
LINC02028-214	ENST00000601524	FFAR4	Q5NUL3	377 aa		11.41	□□□□□ -0.58
LINC02028-214	ENST00000601524	C10orf113	Q5VZT2	155 aa		11.41	□□□□□ -0.58
LINC02028-214	ENST00000601524	ZNF493	Q6ZR52	646 aa		11.41	□□□□□ -0.58
LINC02028-214	ENST00000601524	TMUB2	Q71RG4	321 aa		11.41	□□□□□ -0.58
LINC02028-214	ENST00000601524	LINC00305	Q7Z4B0	112 aa		11.41	□□□□□ -0.58
LINC02028-214	ENST00000601524	TMEM256	Q8N2U0	113 aa		11.41	□□□□□ -0.58
LINC02028-214	ENST00000601524	SHANK2-AS3	Q9BTD1	123 aa		11.41	□□□□□ -0.58
LINC02028-214	ENST00000601524	DNAJC4	Q9NNZ3	241 aa		11.41	□□□□□ -0.58
LINC02028-214	ENST00000601524	DNAH8	Q96JB1	4490 aa		11.41	□□□□□ -0.58
LINC02028-214	ENST00000601524		A0A096LPF7	62 aa		11.4	□□□□□ -0.58
LINC02028-214	ENST00000601524	GAGE12B	A1L429	117 aa		11.4	□□□□□ -0.58
LINC02028-214	ENST00000601524	GAGE7	O76087	117 aa		11.4	□□□□□ -0.58
LINC02028-214	ENST00000601524	GAGE12F	P0CL80	117 aa		11.4	□□□□□ -0.58
LINC02028-214	ENST00000601524	GAGE12G	P0CL81	117 aa		11.4	□□□□□ -0.58
LINC02028-214	ENST00000601524	GAGE12I	P0CL82	117 aa		11.4	□□□□□ -0.58
LINC02028-214	ENST00000601524	MEOX2	P50222	304 aa		11.4	□□□□□ -0.58
LINC02028-214	ENST00000601524	NKX2-5	P52952	324 aa	Predicted RBP	11.4	□□□□□ -0.58
LINC02028-214	ENST00000601524	ZNF345	Q14585	488 aa		11.4	□□□□□ -0.58
LINC02028-214	ENST00000601524		Q6ZRG5	221 aa		11.4	□□□□□ -0.58
LINC02028-214	ENST00000601524	LINC00528	Q8N1L1	170 aa		11.4	□□□□□ -0.58
LINC02028-214	ENST00000601524	FAM30A	Q9NZY2	134 aa		11.4	□□□□□ -0.58
LINC02028-214	ENST00000601524	BOLA2-SMG1P6	H3BVE0	249 aa		11.39	□□□□□ -0.59
LINC02028-214	ENST00000601524	OXT	P01178	125 aa		11.39	□□□□□ -0.59
LINC02028-214	ENST00000601524	ZNF266	Q14584	549 aa		11.39	□□□□□ -0.59
LINC02028-214	ENST00000601524	LINC00612	Q8N6U2	182 aa		11.39	□□□□□ -0.59
LINC02028-214	ENST00000601524	RNASE8	Q8TDE3	154 aa	Known RBP	11.39	□□□□□ -0.59
LINC02028-214	ENST00000601524	ARPC5L	Q9BPX5	153 aa		11.39	□□□□□ -0.59
LINC02028-214	ENST00000601524		A0A0D9SG52	128 aa		11.38	□□□□□ -0.59
LINC02028-214	ENST00000601524	C17orf112	F2Z3M2	114 aa		11.38	□□□□□ -0.59
LINC02028-214	ENST00000601524	MRPS12	O15235	138 aa	Known RBP	11.38	□□□□□ -0.59
LINC02028-214	ENST00000601524	RAB2A	P61019	212 aa		11.38	□□□□□ -0.59
LINC02028-214	ENST00000601524	PXDC1	Q5TGL8	231 aa		11.38	□□□□□ -0.59
LINC02028-214	ENST00000601524	MIR17HG	Q75NE6	70 aa		11.38	□□□□□ -0.59
LINC02028-214	ENST00000601524	OR1L4	Q8NGR5	311 aa		11.38	□□□□□ -0.59
LINC02028-214	ENST00000601524	TMEM263	Q8WUH6	116 aa	Known RBP	11.38	□□□□□ -0.59
LINC02028-214	ENST00000601524	HYLS1	Q96M11	299 aa		11.38	□□□□□ -0.59
LINC02028-214	ENST00000601524	FAT3	Q8TDW7	4589 aa		11.37	□□□□□ -0.59
LINC02028-214	ENST00000601524	TRAV9-2	A0A087WT02	112 aa		11.37	□□□□□ -0.59
LINC02028-214	ENST00000601524	BORCS7-ASMT	A0A0B4J1R7	106 aa		11.37	□□□□□ -0.59
LINC02028-214	ENST00000601524	NPIPB6	E9PJ23	425 aa		11.37	□□□□□ -0.59
LINC02028-214	ENST00000601524		H3BTX0	84 aa		11.37	□□□□□ -0.59
LINC02028-214	ENST00000601524	TAAR5	O14804	337 aa		11.37	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms