RNA–Protein interactions for RNA: ENST00000601324.1

VRK3-222, Transcript of vaccinia related kinase 3, humanhuman

TSL 4

Gene VRK3, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-222ENST00000601324 DOK5Q9P104 306 aa2.65□□□□□ -1.99
VRK3-222ENST00000601324 ARL2BPQ9Y2Y0 163 aa2.65□□□□□ -1.99
VRK3-222ENST00000601324 LY96Q9Y6Y9 160 aa2.65□□□□□ -1.99
VRK3-222ENST00000601324 PNMA8CA0A1B0GUJ8 204 aa2.64□□□□□ -1.99
VRK3-222ENST00000601324 IBA57-AS1B1ANH7 110 aa2.64□□□□□ -1.99
VRK3-222ENST00000601324 ISLRO14498 428 aa2.64□□□□□ -1.99
VRK3-222ENST00000601324 ZNF324O75467 553 aaPredicted RBP2.64□□□□□ -1.99
VRK3-222ENST00000601324 PTHLHP12272 177 aa2.64□□□□□ -1.99
VRK3-222ENST00000601324 G6PCP35575 357 aa2.64□□□□□ -1.99
VRK3-222ENST00000601324 EIF2B2P49770 351 aaKnown RBP2.64□□□□□ -1.99
VRK3-222ENST00000601324 YPEL3P61236 119 aaPredicted RBP2.64□□□□□ -1.99
VRK3-222ENST00000601324 FGL1Q08830 312 aa2.64□□□□□ -1.99
VRK3-222ENST00000601324 LAIR2Q6ISS4 152 aa2.64□□□□□ -1.99
VRK3-222ENST00000601324 TMEM91Q6ZNR0 172 aa2.64□□□□□ -1.99
VRK3-222ENST00000601324 ZNF818PQ6ZRF7 136 aa2.64□□□□□ -1.99
VRK3-222ENST00000601324 Q8N9L7 120 aa2.64□□□□□ -1.99
VRK3-222ENST00000601324 TMEM263Q8WUH6 116 aaKnown RBP2.64□□□□□ -1.99
VRK3-222ENST00000601324 FAM3DQ96BQ1 224 aa2.64□□□□□ -1.99
VRK3-222ENST00000601324 CENPNQ96H22 339 aaPredicted RBP2.64□□□□□ -1.99
VRK3-222ENST00000601324 LINC00052Q96N35 136 aa2.64□□□□□ -1.99
VRK3-222ENST00000601324 HINT2Q9BX68 163 aa2.64□□□□□ -1.99
VRK3-222ENST00000601324 FAM107BQ9H098 131 aa2.64□□□□□ -1.99
VRK3-222ENST00000601324 PRNDQ9UKY0 176 aa2.64□□□□□ -1.99
VRK3-222ENST00000601324 RAB22AQ9UL26 194 aa2.64□□□□□ -1.99
VRK3-222ENST00000601324 RRP15Q9Y3B9 282 aaKnown RBP2.64□□□□□ -1.99
VRK3-222ENST00000601324 MUC17Q685J3 4493 aa2.64□□□□□ -1.99
VRK3-222ENST00000601324 TRAV12-2A0A075B6T6 113 aa2.63□□□□□ -1.99
VRK3-222ENST00000601324 TRAV8-2A0A0B4J237 113 aa2.63□□□□□ -1.99
VRK3-222ENST00000601324 A0A0J9YXV3 536 aa2.63□□□□□ -1.99
VRK3-222ENST00000601324 PGLYRP1O75594 196 aaPredicted RBP2.63□□□□□ -1.99
VRK3-222ENST00000601324 KRASP01116 189 aa2.63□□□□□ -1.99
VRK3-222ENST00000601324 PPYP01298 95 aa2.63□□□□□ -1.99
VRK3-222ENST00000601324 CRISP2P16562 243 aa2.63□□□□□ -1.99
VRK3-222ENST00000601324 F2RP25116 425 aa2.63□□□□□ -1.99
VRK3-222ENST00000601324 RPS10P46783 165 aaKnown RBP2.63□□□□□ -1.99
VRK3-222ENST00000601324 HSPE1P61604 102 aaKnown RBP2.63□□□□□ -1.99
VRK3-222ENST00000601324 ACOT6Q3I5F7 207 aaPredicted RBP2.63□□□□□ -1.99
VRK3-222ENST00000601324 HSD17B12Q53GQ0 312 aa2.63□□□□□ -1.99
VRK3-222ENST00000601324 PRSS54Q6PEW0 395 aa2.63□□□□□ -1.99
VRK3-222ENST00000601324 Q6ZTI0 123 aa2.63□□□□□ -1.99
VRK3-222ENST00000601324 TMEM144Q7Z5S9 345 aa2.63□□□□□ -1.99
VRK3-222ENST00000601324 TMEM256Q8N2U0 113 aa2.63□□□□□ -1.99
VRK3-222ENST00000601324 C11orf72Q8NBR9 251 aa2.63□□□□□ -1.99
VRK3-222ENST00000601324 OR51H1Q8NH63 302 aa2.63□□□□□ -1.99
VRK3-222ENST00000601324 TMEM230Q96A57 120 aa2.63□□□□□ -1.99
VRK3-222ENST00000601324 FKBP11Q9NYL4 201 aa2.63□□□□□ -1.99
VRK3-222ENST00000601324 PRO0461Q9UI25 63 aa2.63□□□□□ -1.99
VRK3-222ENST00000601324 ANXA10Q9UJ72 324 aa2.63□□□□□ -1.99
VRK3-222ENST00000601324 AP4S1Q9Y587 144 aa2.63□□□□□ -1.99
VRK3-222ENST00000601324 A0A0U1RQV1 116 aa2.62□□□□□ -1.99
VRK3-222ENST00000601324 EFCAB10A6NFE3 127 aa2.62□□□□□ -1.99
VRK3-222ENST00000601324 BOLA2-SMG1P6H3BVE0 249 aa2.62□□□□□ -1.99
VRK3-222ENST00000601324 SNAPC5O75971 98 aa2.62□□□□□ -1.99
VRK3-222ENST00000601324 IL4P05112 153 aa2.62□□□□□ -1.99
VRK3-222ENST00000601324 CRYGDP07320 174 aa2.62□□□□□ -1.99
VRK3-222ENST00000601324 GIPP09681 153 aaPredicted RBP2.62□□□□□ -1.99
VRK3-222ENST00000601324 TBPP20226 339 aa2.62□□□□□ -1.99
VRK3-222ENST00000601324 LPAR6P43657 344 aa2.62□□□□□ -1.99
VRK3-222ENST00000601324 HSPA13P48723 471 aa2.62□□□□□ -1.99
VRK3-222ENST00000601324 CRYBA4P53673 196 aa2.62□□□□□ -1.99
VRK3-222ENST00000601324 CATR1Q13166 79 aa2.62□□□□□ -1.99
VRK3-222ENST00000601324 RAB11BQ15907 218 aa2.62□□□□□ -1.99
VRK3-222ENST00000601324 LINC01556Q5JQF7 62 aa2.62□□□□□ -1.99
VRK3-222ENST00000601324 C1orf194Q5T5A4 169 aa2.62□□□□□ -1.99
VRK3-222ENST00000601324 HACD4Q5VWC8 232 aa2.62□□□□□ -1.99
VRK3-222ENST00000601324 EBLN2Q6P2I7 272 aa2.62□□□□□ -1.99
VRK3-222ENST00000601324 ZNF546Q86UE3 836 aa2.62□□□□□ -1.99
VRK3-222ENST00000601324 C10orf126Q8N4M7 172 aa2.62□□□□□ -1.99
VRK3-222ENST00000601324 OR1S2Q8NGQ3 325 aa2.62□□□□□ -1.99
VRK3-222ENST00000601324 Q8WTZ3 238 aa2.62□□□□□ -1.99
VRK3-222ENST00000601324 FAM104AQ969W3 186 aa2.62□□□□□ -1.99
VRK3-222ENST00000601324 NARS2Q96I59 477 aaKnown RBP2.62□□□□□ -1.99
VRK3-222ENST00000601324 TSC22D3Q99576 134 aa2.62□□□□□ -1.99
VRK3-222ENST00000601324 TMEM208Q9BTX3 173 aa2.62□□□□□ -1.99
VRK3-222ENST00000601324 RCL1Q9Y2P8 373 aaKnown RBP2.62□□□□□ -1.99
VRK3-222ENST00000601324 LSM2Q9Y333 95 aaKnown RBP2.62□□□□□ -1.99
VRK3-222ENST00000601324 ICOSQ9Y6W8 199 aa2.62□□□□□ -1.99
VRK3-222ENST00000601324 IGKV1D-37A0A075B6S9 117 aa2.61□□□□□ -1.99
VRK3-222ENST00000601324 TRAV30A0A087WSZ9 112 aa2.61□□□□□ -1.99
VRK3-222ENST00000601324 LOC100130705A0A1B0GUX0 176 aa2.61□□□□□ -1.99
VRK3-222ENST00000601324 TMEM235A6NFC5 223 aa2.61□□□□□ -1.99
VRK3-222ENST00000601324 ZNF98A6NK75 572 aa2.61□□□□□ -1.99
VRK3-222ENST00000601324 CORTO00230 105 aa2.61□□□□□ -1.99
VRK3-222ENST00000601324 GSTZ1O43708 216 aaPredicted RBP2.61□□□□□ -1.99
VRK3-222ENST00000601324 ADAP1O75689 374 aa2.61□□□□□ -1.99
VRK3-222ENST00000601324 CCNKO75909 580 aa2.61□□□□□ -1.99
VRK3-222ENST00000601324 EVI2AP22794 236 aa2.61□□□□□ -1.99
VRK3-222ENST00000601324 OR10J1P30954 320 aa2.61□□□□□ -1.99
VRK3-222ENST00000601324 SUPT4H1P63272 117 aaKnown RBP2.61□□□□□ -1.99
VRK3-222ENST00000601324 ERHP84090 104 aaKnown RBP2.61□□□□□ -1.99
VRK3-222ENST00000601324 TDRG1Q3Y452 100 aa2.61□□□□□ -1.99
VRK3-222ENST00000601324 CDNFQ49AH0 187 aa2.61□□□□□ -1.99
VRK3-222ENST00000601324 SPINK9Q5DT21 86 aa2.61□□□□□ -1.99
VRK3-222ENST00000601324 AADACL3Q5VUY0 350 aa2.61□□□□□ -1.99
VRK3-222ENST00000601324 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.61□□□□□ -1.99
VRK3-222ENST00000601324 NEGR1Q7Z3B1 354 aa2.61□□□□□ -1.99
VRK3-222ENST00000601324 MS4A15Q8N5U1 240 aa2.61□□□□□ -1.99
VRK3-222ENST00000601324 ARL6IP6Q8N6S5 226 aa2.61□□□□□ -1.99
VRK3-222ENST00000601324 OR51G1Q8NGK1 321 aa2.61□□□□□ -1.99
VRK3-222ENST00000601324 COQ8AQ8NI60 647 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms