RNA–Protein interactions for RNA: ENST00000597776.1

LSM4-205, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, human

TSL 2

Gene LSM4, Length 446 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LSM4-205	ENST00000597776	MRPL53	Q96EL3	112 aa	Known RBP	7.25	□□□□□ -1.25
LSM4-205	ENST00000597776	C2orf50	Q96LR7	162 aa		7.25	□□□□□ -1.25
LSM4-205	ENST00000597776	AGPAT4-IT1	Q9H0P7	198 aa		7.25	□□□□□ -1.25
LSM4-205	ENST00000597776	FUT9	Q9Y231	359 aa		7.25	□□□□□ -1.25
LSM4-205	ENST00000597776	KLF12	Q9Y4X4	402 aa		7.25	□□□□□ -1.25
LSM4-205	ENST00000597776	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	7.24	□□□□□ -1.25
LSM4-205	ENST00000597776		A0A1W2PPQ1	181 aa		7.24	□□□□□ -1.25
LSM4-205	ENST00000597776	KLLN	B2CW77	178 aa		7.24	□□□□□ -1.25
LSM4-205	ENST00000597776	ZNF324	O75467	553 aa	Predicted RBP	7.24	□□□□□ -1.25
LSM4-205	ENST00000597776	IGKV2D-40	P01614	121 aa	Predicted RBP	7.24	□□□□□ -1.25
LSM4-205	ENST00000597776	PVALB	P20472	110 aa	Predicted RBP	7.24	□□□□□ -1.25
LSM4-205	ENST00000597776	SULT1A1	P50225	295 aa		7.24	□□□□□ -1.25
LSM4-205	ENST00000597776	LINC00315	P59091	139 aa		7.24	□□□□□ -1.25
LSM4-205	ENST00000597776	RAB32	Q13637	225 aa		7.24	□□□□□ -1.25
LSM4-205	ENST00000597776	PRR9	Q5T870	116 aa		7.24	□□□□□ -1.25
LSM4-205	ENST00000597776		Q6ZQT7	251 aa		7.24	□□□□□ -1.25
LSM4-205	ENST00000597776		Q8N1X5	172 aa		7.24	□□□□□ -1.25
LSM4-205	ENST00000597776	C12orf45	Q8N5I9	185 aa	Predicted RBP	7.24	□□□□□ -1.25
LSM4-205	ENST00000597776	TMEM252	Q8N6L7	170 aa		7.24	□□□□□ -1.25
LSM4-205	ENST00000597776	ZNF680	Q8NEM1	530 aa		7.24	□□□□□ -1.25
LSM4-205	ENST00000597776	FAM19A4	Q96LR4	140 aa		7.24	□□□□□ -1.25
LSM4-205	ENST00000597776	SCRT2	Q9NQ03	307 aa		7.24	□□□□□ -1.25
LSM4-205	ENST00000597776	LYRM2	Q9NU23	88 aa	Predicted RBP	7.24	□□□□□ -1.25
LSM4-205	ENST00000597776	TMEM14C	Q9P0S9	112 aa		7.24	□□□□□ -1.25
LSM4-205	ENST00000597776	TIMM9	Q9Y5J7	89 aa		7.24	□□□□□ -1.25
LSM4-205	ENST00000597776	IGHV3-53	P01767	116 aa		7.23	□□□□□ -1.25
LSM4-205	ENST00000597776	HIST1H1E	P10412	219 aa	Known RBP	7.23	□□□□□ -1.25
LSM4-205	ENST00000597776	S100A11	P31949	105 aa		7.23	□□□□□ -1.25
LSM4-205	ENST00000597776	FUS	P35637	526 aa	Known RBP eCLIP	7.23	□□□□□ -1.25
LSM4-205	ENST00000597776	HBG1	P69891	147 aa		7.23	□□□□□ -1.25
LSM4-205	ENST00000597776	HBG2	P69892	147 aa		7.23	□□□□□ -1.25
LSM4-205	ENST00000597776	ICAM4	Q14773	271 aa		7.23	□□□□□ -1.25
LSM4-205	ENST00000597776	FAM122C	Q6P4D5	195 aa		7.23	□□□□□ -1.25
LSM4-205	ENST00000597776	STX12	Q86Y82	276 aa		7.23	□□□□□ -1.25
LSM4-205	ENST00000597776	EIF4E3	Q8N5X7	224 aa	Known RBP	7.23	□□□□□ -1.25
LSM4-205	ENST00000597776	LINC00477	Q96M19	166 aa		7.23	□□□□□ -1.25
LSM4-205	ENST00000597776	VGLL1	Q99990	258 aa		7.23	□□□□□ -1.25
LSM4-205	ENST00000597776	SLC25A2	Q9BXI2	301 aa		7.23	□□□□□ -1.25
LSM4-205	ENST00000597776	GPN1	Q9HCN4	374 aa	Predicted RBP	7.23	□□□□□ -1.25
LSM4-205	ENST00000597776	TP53TG3	Q9ULZ0	132 aa		7.23	□□□□□ -1.25
LSM4-205	ENST00000597776	PRELID1	Q9Y255	219 aa		7.23	□□□□□ -1.25
LSM4-205	ENST00000597776	SPINK4	O60575	86 aa		7.22	□□□□□ -1.25
LSM4-205	ENST00000597776	NXPH4	O95158	308 aa		7.22	□□□□□ -1.25
LSM4-205	ENST00000597776	GPX1	P07203	203 aa		7.22	□□□□□ -1.25
LSM4-205	ENST00000597776	H2AFB2	P0C5Z0	115 aa		7.22	□□□□□ -1.25
LSM4-205	ENST00000597776	BTF3	P20290	206 aa	Known RBP	7.22	□□□□□ -1.25
LSM4-205	ENST00000597776	TCL1A	P56279	114 aa		7.22	□□□□□ -1.25
LSM4-205	ENST00000597776	IL15RA	Q13261	267 aa		7.22	□□□□□ -1.25
LSM4-205	ENST00000597776	PDE6H	Q13956	83 aa		7.22	□□□□□ -1.25
LSM4-205	ENST00000597776	ANXA2R	Q3ZCQ2	193 aa		7.22	□□□□□ -1.25
LSM4-205	ENST00000597776		Q6ZRN7	208 aa	Predicted RBP	7.22	□□□□□ -1.25
LSM4-205	ENST00000597776	C9orf47	Q6ZRZ4	202 aa		7.22	□□□□□ -1.25
LSM4-205	ENST00000597776	ZFAND2A	Q8N6M9	145 aa		7.22	□□□□□ -1.25
LSM4-205	ENST00000597776	THAP6	Q8TBB0	222 aa		7.22	□□□□□ -1.25
LSM4-205	ENST00000597776	CHAC2	Q8WUX2	184 aa		7.22	□□□□□ -1.25
LSM4-205	ENST00000597776	FAM167A-AS1	Q96KT0	104 aa		7.22	□□□□□ -1.25
LSM4-205	ENST00000597776	C18orf15	Q96N68	181 aa		7.22	□□□□□ -1.25
LSM4-205	ENST00000597776	LINC00467	Q9BRT7	94 aa		7.22	□□□□□ -1.25
LSM4-205	ENST00000597776	NPCDR1	Q9BY65	106 aa		7.22	□□□□□ -1.25
LSM4-205	ENST00000597776	MRPL16	Q9NX20	251 aa	Known RBP	7.22	□□□□□ -1.25
LSM4-205	ENST00000597776	RGS13	O14921	159 aa		7.21	□□□□□ -1.26
LSM4-205	ENST00000597776	SIVA1	O15304	175 aa		7.21	□□□□□ -1.26
LSM4-205	ENST00000597776	PAX4	O43316	350 aa		7.21	□□□□□ -1.26
LSM4-205	ENST00000597776	MPDU1	O75352	247 aa		7.21	□□□□□ -1.26
LSM4-205	ENST00000597776	CRISP2	P16562	243 aa		7.21	□□□□□ -1.26
LSM4-205	ENST00000597776	MIR17HG	Q75NE6	70 aa		7.21	□□□□□ -1.26
LSM4-205	ENST00000597776		Q8TAT8	98 aa		7.21	□□□□□ -1.26
LSM4-205	ENST00000597776	ST6GAL2	Q96JF0	529 aa		7.21	□□□□□ -1.26
LSM4-205	ENST00000597776	AAMDC	Q9H7C9	122 aa		7.21	□□□□□ -1.26
LSM4-205	ENST00000597776	TNFRSF18	Q9Y5U5	241 aa		7.21	□□□□□ -1.26
LSM4-205	ENST00000597776	ICOS	Q9Y6W8	199 aa		7.21	□□□□□ -1.26
LSM4-205	ENST00000597776	OR10J4	P0C629	311 aa		7.2	□□□□□ -1.26
LSM4-205	ENST00000597776	NBEAP1	P0C6P0	100 aa		7.2	□□□□□ -1.26
LSM4-205	ENST00000597776	NHLH2	Q02577	135 aa		7.2	□□□□□ -1.26
LSM4-205	ENST00000597776	ATP6V1F	Q16864	119 aa		7.2	□□□□□ -1.26
LSM4-205	ENST00000597776	IBA57	Q5T440	356 aa	Known RBP	7.2	□□□□□ -1.26
LSM4-205	ENST00000597776	TMEM78	Q5T7P6	136 aa		7.2	□□□□□ -1.26
LSM4-205	ENST00000597776	IGHV1OR15-1	A0A075B7D0	117 aa		7.19	□□□□□ -1.26
LSM4-205	ENST00000597776	FAM240B	A0A1B0GVZ2	78 aa		7.19	□□□□□ -1.26
LSM4-205	ENST00000597776	SIX6	O95475	246 aa		7.19	□□□□□ -1.26
LSM4-205	ENST00000597776	NMB	P08949	121 aa		7.19	□□□□□ -1.26
LSM4-205	ENST00000597776	CRYBA4	P53673	196 aa		7.19	□□□□□ -1.26
LSM4-205	ENST00000597776	MUC21	Q5SSG8	566 aa		7.19	□□□□□ -1.26
LSM4-205	ENST00000597776	OR5C1	Q8NGR4	320 aa		7.19	□□□□□ -1.26
LSM4-205	ENST00000597776	FXYD5	Q96DB9	178 aa		7.19	□□□□□ -1.26
LSM4-205	ENST00000597776	PHYHIPL	Q96FC7	376 aa		7.19	□□□□□ -1.26
LSM4-205	ENST00000597776	C8orf49	Q96NF6	230 aa		7.19	□□□□□ -1.26
LSM4-205	ENST00000597776	ARPC5L	Q9BPX5	153 aa		7.19	□□□□□ -1.26
LSM4-205	ENST00000597776	ZNF492	Q9P255	531 aa		7.19	□□□□□ -1.26
LSM4-205	ENST00000597776	PRO0255	Q9UI72	69 aa		7.19	□□□□□ -1.26
LSM4-205	ENST00000597776	PRAF2	O60831	178 aa		7.18	□□□□□ -1.26
LSM4-205	ENST00000597776	ZNF138	P52744	262 aa		7.18	□□□□□ -1.26
LSM4-205	ENST00000597776	ZNF415	Q09FC8	603 aa		7.18	□□□□□ -1.26
LSM4-205	ENST00000597776	FHL2	Q14192	279 aa		7.18	□□□□□ -1.26
LSM4-205	ENST00000597776	LRRC37A5P	Q49AS3	106 aa		7.18	□□□□□ -1.26
LSM4-205	ENST00000597776	PAXX	Q9BUH6	204 aa		7.18	□□□□□ -1.26
LSM4-205	ENST00000597776	CCDC32	Q9BV29	185 aa		7.18	□□□□□ -1.26
LSM4-205	ENST00000597776	OR51M1	Q9H341	326 aa		7.18	□□□□□ -1.26
LSM4-205	ENST00000597776	OR5AC2	Q9NZP5	309 aa		7.18	□□□□□ -1.26
LSM4-205	ENST00000597776	HHLA3	Q9XRX5	114 aa		7.18	□□□□□ -1.26

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