RNA–Protein interactions for RNA: ENST00000595803.5

SHKBP1-209, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-209ENST00000595803 TRBV6-1A0A0K0K1D8 114 aa9.77□□□□□ -0.85
SHKBP1-209ENST00000595803 RBAKDNA6NC62 111 aa9.77□□□□□ -0.85
SHKBP1-209ENST00000595803 IZUMO1RA6ND01 250 aa9.77□□□□□ -0.85
SHKBP1-209ENST00000595803 SNAPINO95295 136 aa9.77□□□□□ -0.85
SHKBP1-209ENST00000595803 IGKV2D-40P01614 121 aaPredicted RBP9.77□□□□□ -0.85
SHKBP1-209ENST00000595803 IGLV1-51P01701 117 aa9.77□□□□□ -0.85
SHKBP1-209ENST00000595803 INSL3P51460 131 aa9.77□□□□□ -0.85
SHKBP1-209ENST00000595803 FLI1Q01543 452 aaPredicted RBP9.77□□□□□ -0.85
SHKBP1-209ENST00000595803 PNRC1Q12796 327 aaPredicted RBP9.77□□□□□ -0.85
SHKBP1-209ENST00000595803 CENPWQ5EE01 88 aa9.77□□□□□ -0.85
SHKBP1-209ENST00000595803 PSMG4Q5JS54 123 aa9.77□□□□□ -0.85
SHKBP1-209ENST00000595803 WFDC9Q8NEX5 89 aa9.77□□□□□ -0.85
SHKBP1-209ENST00000595803 OCC1Q8TAD7 63 aa9.77□□□□□ -0.85
SHKBP1-209ENST00000595803 LY96Q9Y6Y9 160 aa9.77□□□□□ -0.85
SHKBP1-209ENST00000595803 COL7A1Q02388 2944 aa9.76□□□□□ -0.85
SHKBP1-209ENST00000595803 RPL23P62829 140 aaKnown RBP9.76□□□□□ -0.85
SHKBP1-209ENST00000595803 ERCC8Q13216 396 aa9.76□□□□□ -0.85
SHKBP1-209ENST00000595803 ADIRFQ15847 76 aa9.76□□□□□ -0.85
SHKBP1-209ENST00000595803 BEAN1Q3B7T3 259 aa9.76□□□□□ -0.85
SHKBP1-209ENST00000595803 TMEM78Q5T7P6 136 aa9.76□□□□□ -0.85
SHKBP1-209ENST00000595803 EBLN2Q6P2I7 272 aa9.76□□□□□ -0.85
SHKBP1-209ENST00000595803 FAM24BQ8N5W8 94 aa9.76□□□□□ -0.85
SHKBP1-209ENST00000595803 CLRN3Q8NCR9 226 aa9.76□□□□□ -0.85
SHKBP1-209ENST00000595803 LINC00477Q96M19 166 aa9.76□□□□□ -0.85
SHKBP1-209ENST00000595803 VGLL1Q99990 258 aa9.76□□□□□ -0.85
SHKBP1-209ENST00000595803 ZFP30Q9Y2G7 519 aa9.76□□□□□ -0.85
SHKBP1-209ENST00000595803 TRAV8-1A0A0A6YYK1 113 aa9.75□□□□□ -0.85
SHKBP1-209ENST00000595803 IGLV2-11P01706 119 aa9.75□□□□□ -0.85
SHKBP1-209ENST00000595803 MGST1P10620 155 aaKnown RBP9.75□□□□□ -0.85
SHKBP1-209ENST00000595803 DEFB131AP59861 70 aa9.75□□□□□ -0.85
SHKBP1-209ENST00000595803 SAPCD1Q5SSQ6 148 aa9.75□□□□□ -0.85
SHKBP1-209ENST00000595803 OR8A1Q8NGG7 326 aa9.75□□□□□ -0.85
SHKBP1-209ENST00000595803 IGF2BP2-AS1Q96M15 143 aa9.75□□□□□ -0.85
SHKBP1-209ENST00000595803 NDFIP1Q9BT67 221 aa9.75□□□□□ -0.85
SHKBP1-209ENST00000595803 AGPAT4-IT1Q9H0P7 198 aa9.75□□□□□ -0.85
SHKBP1-209ENST00000595803 BIN3Q9NQY0 253 aa9.75□□□□□ -0.85
SHKBP1-209ENST00000595803 AURKAIP1Q9NWT8 199 aaPredicted RBP9.75□□□□□ -0.85
SHKBP1-209ENST00000595803 TRBV20OR9-2A0A075B6H5 130 aa9.74□□□□□ -0.85
SHKBP1-209ENST00000595803 PGPEP1LA6NFU8 196 aa9.74□□□□□ -0.85
SHKBP1-209ENST00000595803 G3V4G9 280 aa9.74□□□□□ -0.85
SHKBP1-209ENST00000595803 DUSP14O95147 198 aaKnown RBP9.74□□□□□ -0.85
SHKBP1-209ENST00000595803 LTAP01374 205 aa9.74□□□□□ -0.85
SHKBP1-209ENST00000595803 ZNF705DP0CH99 300 aaPredicted RBP9.74□□□□□ -0.85
SHKBP1-209ENST00000595803 ZNF705BP0CI00 300 aaPredicted RBP9.74□□□□□ -0.85
SHKBP1-209ENST00000595803 ZNF138P52744 262 aa9.74□□□□□ -0.85
SHKBP1-209ENST00000595803 HIST1H1AQ02539 215 aaPredicted RBP9.74□□□□□ -0.85
SHKBP1-209ENST00000595803 C9orf47Q6ZRZ4 202 aa9.74□□□□□ -0.85
SHKBP1-209ENST00000595803 Q86TA4 180 aa9.74□□□□□ -0.85
SHKBP1-209ENST00000595803 LINC01551Q86U37 167 aa9.74□□□□□ -0.85
SHKBP1-209ENST00000595803 TMEM183AQ8IXX5 376 aa9.74□□□□□ -0.85
SHKBP1-209ENST00000595803 MRAPQ8TCY5 172 aa9.74□□□□□ -0.85
SHKBP1-209ENST00000595803 SMIM12Q96EX1 92 aa9.74□□□□□ -0.85
SHKBP1-209ENST00000595803 B4DEV8 164 aa9.73□□□□□ -0.85
SHKBP1-209ENST00000595803 F6UB75 175 aa9.73□□□□□ -0.85
SHKBP1-209ENST00000595803 DEFB1P60022 68 aa9.73□□□□□ -0.85
SHKBP1-209ENST00000595803 NHLRC2Q8NBF2 726 aa9.73□□□□□ -0.85
SHKBP1-209ENST00000595803 PPP1R14DQ9NXH3 145 aa9.73□□□□□ -0.85
SHKBP1-209ENST00000595803 ZNF492Q9P255 531 aa9.73□□□□□ -0.85
SHKBP1-209ENST00000595803 ZNF256Q9Y2P7 627 aaPredicted RBP9.73□□□□□ -0.85
SHKBP1-209ENST00000595803 C7orf77A4D0Y5 90 aa9.72□□□□□ -0.85
SHKBP1-209ENST00000595803 NPIPB6E9PJ23 425 aa9.72□□□□□ -0.85
SHKBP1-209ENST00000595803 GCGP01275 180 aa9.72□□□□□ -0.85
SHKBP1-209ENST00000595803 IGLV2-8P01709 118 aa9.72□□□□□ -0.85
SHKBP1-209ENST00000595803 MT-ND4LP03901 98 aa9.72□□□□□ -0.85
SHKBP1-209ENST00000595803 IGLL1P15814 213 aa9.72□□□□□ -0.85
SHKBP1-209ENST00000595803 KPRPQ5T749 579 aaPredicted RBP9.72□□□□□ -0.85
SHKBP1-209ENST00000595803 FOXI2Q6ZQN5 318 aa9.72□□□□□ -0.85
SHKBP1-209ENST00000595803 PRR25Q96S07 402 aa9.72□□□□□ -0.85
SHKBP1-209ENST00000595803 ASCL2Q99929 193 aa9.72□□□□□ -0.85
SHKBP1-209ENST00000595803 GPR61Q9BZJ8 451 aa9.72□□□□□ -0.85
SHKBP1-209ENST00000595803 MAP6D1Q9H9H5 199 aa9.72□□□□□ -0.85
SHKBP1-209ENST00000595803 RPS10P5Q9NQ39 176 aa9.72□□□□□ -0.85
SHKBP1-209ENST00000595803 A0A0J9YX75 114 aa9.71□□□□□ -0.86
SHKBP1-209ENST00000595803 OR11H12B2RN74 326 aa9.71□□□□□ -0.86
SHKBP1-209ENST00000595803 OR5I1Q13606 314 aa9.71□□□□□ -0.86
SHKBP1-209ENST00000595803 RHEBQ15382 184 aa9.71□□□□□ -0.86
SHKBP1-209ENST00000595803 ATRAIDQ6UW56 229 aa9.71□□□□□ -0.86
SHKBP1-209ENST00000595803 OR4B1Q8NGF8 309 aa9.71□□□□□ -0.86
SHKBP1-209ENST00000595803 Q8TAT8 98 aa9.71□□□□□ -0.86
SHKBP1-209ENST00000595803 ISOC2Q96AB3 205 aa9.71□□□□□ -0.86
SHKBP1-209ENST00000595803 DAZAP1Q96EP5 407 aaKnown RBP9.71□□□□□ -0.86
SHKBP1-209ENST00000595803 MLST8Q9BVC4 326 aa9.71□□□□□ -0.86
SHKBP1-209ENST00000595803 SAV1Q9H4B6 383 aaPredicted RBP9.71□□□□□ -0.86
SHKBP1-209ENST00000595803 LENEPQ9Y5L5 61 aa9.71□□□□□ -0.86
SHKBP1-209ENST00000595803 KNCNA6PVL3 124 aa9.7□□□□□ -0.86
SHKBP1-209ENST00000595803 K7EN84 100 aa9.7□□□□□ -0.86
SHKBP1-209ENST00000595803 PPP1R2P9O14990 202 aa9.7□□□□□ -0.86
SHKBP1-209ENST00000595803 CT45A10P0DMU9 189 aa9.7□□□□□ -0.86
SHKBP1-209ENST00000595803 ERVFC1-1P60608 527 aa9.7□□□□□ -0.86
SHKBP1-209ENST00000595803 SMUG1Q53HV7 270 aa9.7□□□□□ -0.86
SHKBP1-209ENST00000595803 ACTL10Q5JWF8 245 aa9.7□□□□□ -0.86
SHKBP1-209ENST00000595803 PRR27Q6MZM9 219 aa9.7□□□□□ -0.86
SHKBP1-209ENST00000595803 C15orf54Q8N8G6 183 aa9.7□□□□□ -0.86
SHKBP1-209ENST00000595803 OR10G8Q8NGN5 311 aa9.7□□□□□ -0.86
SHKBP1-209ENST00000595803 ANAPC16Q96DE5 110 aa9.7□□□□□ -0.86
SHKBP1-209ENST00000595803 C8orf49Q96NF6 230 aa9.7□□□□□ -0.86
SHKBP1-209ENST00000595803 IGKV3-20P01619 116 aa9.69□□□□□ -0.86
SHKBP1-209ENST00000595803 RNF212Q495C1 297 aa9.69□□□□□ -0.86
SHKBP1-209ENST00000595803 GDF5OSQ5U4N7 250 aa9.69□□□□□ -0.86
SHKBP1-209ENST00000595803 APRG1Q8IVJ8 170 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 334 ms