RNA–Protein interactions for RNA: ENST00000594387.1

IRF3-208, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-208ENST00000594387 RXFP4Q8TDU9 374 aa12.33□□□□□ -0.44
IRF3-208ENST00000594387 WFDC1Q9HC57 220 aa12.33□□□□□ -0.44
IRF3-208ENST00000594387 CBY3A6NI87 242 aa12.32□□□□□ -0.44
IRF3-208ENST00000594387 F5H768 121 aa12.32□□□□□ -0.44
IRF3-208ENST00000594387 ATP5G1P05496 136 aa12.32□□□□□ -0.44
IRF3-208ENST00000594387 RNASE4P34096 147 aaKnown RBP12.32□□□□□ -0.44
IRF3-208ENST00000594387 ATP5G3P48201 142 aa12.32□□□□□ -0.44
IRF3-208ENST00000594387 KIR3DS1Q14943 382 aa12.32□□□□□ -0.44
IRF3-208ENST00000594387 HSD17B11Q8NBQ5 300 aa12.32□□□□□ -0.44
IRF3-208ENST00000594387 OR10G4Q8NGN3 311 aa12.32□□□□□ -0.44
IRF3-208ENST00000594387 OR10G9Q8NGN4 311 aa12.32□□□□□ -0.44
IRF3-208ENST00000594387 OR10G7Q8NGN6 311 aa12.32□□□□□ -0.44
IRF3-208ENST00000594387 CMTM2Q8TAZ6 248 aa12.32□□□□□ -0.44
IRF3-208ENST00000594387 PHYHIPLQ96FC7 376 aa12.32□□□□□ -0.44
IRF3-208ENST00000594387 AQP10Q96PS8 301 aa12.32□□□□□ -0.44
IRF3-208ENST00000594387 Q9H3A6 140 aa12.32□□□□□ -0.44
IRF3-208ENST00000594387 NOP10Q9NPE3 64 aaKnown RBP12.32□□□□□ -0.44
IRF3-208ENST00000594387 IGKV2-40A0A087WW87 121 aaPredicted RBP12.31□□□□□ -0.44
IRF3-208ENST00000594387 IGKV2D-40P01614 121 aaPredicted RBP12.31□□□□□ -0.44
IRF3-208ENST00000594387 MBP02144 154 aa12.31□□□□□ -0.44
IRF3-208ENST00000594387 NMBP08949 121 aa12.31□□□□□ -0.44
IRF3-208ENST00000594387 POM121L12Q8N7R1 296 aa12.31□□□□□ -0.44
IRF3-208ENST00000594387 C15orf53Q8NAA6 179 aa12.31□□□□□ -0.44
IRF3-208ENST00000594387 RNASE8Q8TDE3 154 aaKnown RBP12.31□□□□□ -0.44
IRF3-208ENST00000594387 RYR2Q92736 4967 aa12.3□□□□□ -0.44
IRF3-208ENST00000594387 BORCS7-ASMTA0A0B4J1R7 106 aa12.3□□□□□ -0.44
IRF3-208ENST00000594387 PLAC8L1A1L4L8 177 aa12.3□□□□□ -0.44
IRF3-208ENST00000594387 ZNF138P52744 262 aa12.3□□□□□ -0.44
IRF3-208ENST00000594387 TMEM88Q6PEY1 159 aa12.3□□□□□ -0.44
IRF3-208ENST00000594387 ZNF680Q8NEM1 530 aa12.3□□□□□ -0.44
IRF3-208ENST00000594387 PSMG3Q9BT73 122 aaPredicted RBP12.3□□□□□ -0.44
IRF3-208ENST00000594387 ZNF492Q9P255 531 aa12.3□□□□□ -0.44
IRF3-208ENST00000594387 FXYD6-FXYD2A0A087WZ82 144 aa12.29□□□□□ -0.44
IRF3-208ENST00000594387 RBAKDNA6NC62 111 aa12.29□□□□□ -0.44
IRF3-208ENST00000594387 KLLNB2CW77 178 aa12.29□□□□□ -0.44
IRF3-208ENST00000594387 RGS13O14921 159 aa12.29□□□□□ -0.44
IRF3-208ENST00000594387 CRISP2P16562 243 aa12.29□□□□□ -0.44
IRF3-208ENST00000594387 CDC34P49427 236 aaPredicted RBP12.29□□□□□ -0.44
IRF3-208ENST00000594387 RAB2AP61019 212 aa12.29□□□□□ -0.44
IRF3-208ENST00000594387 SERF2P84101 59 aa12.29□□□□□ -0.44
IRF3-208ENST00000594387 EIF4E3Q8N5X7 224 aaKnown RBP12.29□□□□□ -0.44
IRF3-208ENST00000594387 OR2T35Q8NGX2 323 aa12.29□□□□□ -0.44
IRF3-208ENST00000594387 HYLS1Q96M11 299 aa12.29□□□□□ -0.44
IRF3-208ENST00000594387 VGLL1Q99990 258 aa12.29□□□□□ -0.44
IRF3-208ENST00000594387 TRBV7-9A0A0J9YWB2 115 aa12.28□□□□□ -0.44
IRF3-208ENST00000594387 PGPA6NDG6 321 aa12.28□□□□□ -0.44
IRF3-208ENST00000594387 GNPNAT1Q96EK6 184 aaPredicted RBP12.28□□□□□ -0.44
IRF3-208ENST00000594387 ZNF503Q96F45 646 aa12.28□□□□□ -0.44
IRF3-208ENST00000594387 FAM19A4Q96LR4 140 aa12.28□□□□□ -0.44
IRF3-208ENST00000594387 OTORQ9NRC9 128 aa12.28□□□□□ -0.44
IRF3-208ENST00000594387 CD300CQ08708 224 aa12.27□□□□□ -0.45
IRF3-208ENST00000594387 BTN1A1Q13410 526 aa12.27□□□□□ -0.45
IRF3-208ENST00000594387 OR2G3Q8NGZ4 309 aa12.27□□□□□ -0.45
IRF3-208ENST00000594387 ARPC5LQ9BPX5 153 aa12.27□□□□□ -0.45
IRF3-208ENST00000594387 ATG101Q9BSB4 218 aa12.27□□□□□ -0.45
IRF3-208ENST00000594387 RPH3ALQ9UNE2 315 aa12.27□□□□□ -0.45
IRF3-208ENST00000594387 ALMS1Q8TCU4 4167 aa12.26□□□□□ -0.45
IRF3-208ENST00000594387 DIRC3C9JPN6 131 aa12.26□□□□□ -0.45
IRF3-208ENST00000594387 HMGB3O15347 200 aaKnown RBP12.26□□□□□ -0.45
IRF3-208ENST00000594387 ATP6V0CP27449 155 aa12.26□□□□□ -0.45
IRF3-208ENST00000594387 RNF212Q495C1 297 aa12.26□□□□□ -0.45
IRF3-208ENST00000594387 LINC00467Q9BRT7 94 aa12.26□□□□□ -0.45
IRF3-208ENST00000594387 GAGE12BA1L429 117 aa12.25□□□□□ -0.45
IRF3-208ENST00000594387 ZNF324O75467 553 aaPredicted RBP12.25□□□□□ -0.45
IRF3-208ENST00000594387 GAGE7O76087 117 aa12.25□□□□□ -0.45
IRF3-208ENST00000594387 NUDT3O95989 172 aa12.25□□□□□ -0.45
IRF3-208ENST00000594387 GAGE12FP0CL80 117 aa12.25□□□□□ -0.45
IRF3-208ENST00000594387 GAGE12GP0CL81 117 aa12.25□□□□□ -0.45
IRF3-208ENST00000594387 GAGE12IP0CL82 117 aa12.25□□□□□ -0.45
IRF3-208ENST00000594387 OR5I1Q13606 314 aa12.25□□□□□ -0.45
IRF3-208ENST00000594387 ANXA2RQ3ZCQ2 193 aa12.25□□□□□ -0.45
IRF3-208ENST00000594387 Q5BKY6 102 aa12.25□□□□□ -0.45
IRF3-208ENST00000594387 ARL6IP6Q8N6S5 226 aa12.25□□□□□ -0.45
IRF3-208ENST00000594387 ACTR3CQ9C0K3 210 aaPredicted RBP12.25□□□□□ -0.45
IRF3-208ENST00000594387 TNFSF18Q9UNG2 199 aa12.25□□□□□ -0.45
IRF3-208ENST00000594387 LENEPQ9Y5L5 61 aa12.25□□□□□ -0.45
IRF3-208ENST00000594387 SACSQ9NZJ4 4579 aa12.25□□□□□ -0.45
IRF3-208ENST00000594387 IGHV1OR15-1A0A075B7D0 117 aa12.24□□□□□ -0.45
IRF3-208ENST00000594387 K7EQM0 130 aa12.24□□□□□ -0.45
IRF3-208ENST00000594387 EIF3GO75821 320 aaKnown RBP eCLIP12.24□□□□□ -0.45
IRF3-208ENST00000594387 DAZ2Q13117 558 aaKnown RBP12.24□□□□□ -0.45
IRF3-208ENST00000594387 ZFAND2AQ8N6M9 145 aa12.24□□□□□ -0.45
IRF3-208ENST00000594387 Q8TAT8 98 aa12.24□□□□□ -0.45
IRF3-208ENST00000594387 RAB24Q969Q5 203 aa12.24□□□□□ -0.45
IRF3-208ENST00000594387 GSN-AS1Q9NRJ2 163 aa12.24□□□□□ -0.45
IRF3-208ENST00000594387 TRGV2A0A075B6R0 118 aa12.23□□□□□ -0.45
IRF3-208ENST00000594387 TAAR5O14804 337 aa12.23□□□□□ -0.45
IRF3-208ENST00000594387 CXorf1O96002 111 aa12.23□□□□□ -0.45
IRF3-208ENST00000594387 STAG3L2P0CL84 134 aa12.23□□□□□ -0.45
IRF3-208ENST00000594387 STAG3L3P0CL85 134 aa12.23□□□□□ -0.45
IRF3-208ENST00000594387 ARL14EPLP0DKL9 152 aa12.23□□□□□ -0.45
IRF3-208ENST00000594387 TMED6Q8WW62 240 aa12.23□□□□□ -0.45
IRF3-208ENST00000594387 TMEM167BQ9NRX6 74 aa12.23□□□□□ -0.45
IRF3-208ENST00000594387 PLECQ15149 4684 aaKnown RBP12.22□□□□□ -0.45
IRF3-208ENST00000594387 IBA57Q5T440 356 aaKnown RBP12.22□□□□□ -0.45
IRF3-208ENST00000594387 RPL7L1Q6DKI1 246 aaKnown RBP12.22□□□□□ -0.45
IRF3-208ENST00000594387 FAM159AQ6UWV7 190 aa12.22□□□□□ -0.45
IRF3-208ENST00000594387 IQCF2Q8IXL9 164 aa12.22□□□□□ -0.45
IRF3-208ENST00000594387 NDFIP1Q9BT67 221 aa12.22□□□□□ -0.45
IRF3-208ENST00000594387 HYDINQ4G0P3 5121 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms