RNA–Protein interactions for RNA: ENST00000592395.5

TCF3-216, Transcript of transcription factor 3, humanhuman

TSL 5

Gene TCF3, Length 996 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-216ENST00000592395 C20orf144Q9BQM9 153 aa13.4□□□□□ -0.26
TCF3-216ENST00000592395 IGKV2-40A0A087WW87 121 aaPredicted RBP13.39□□□□□ -0.27
TCF3-216ENST00000592395 BCL2L11O43521 198 aa13.39□□□□□ -0.27
TCF3-216ENST00000592395 IGKV2D-40P01614 121 aaPredicted RBP13.39□□□□□ -0.27
TCF3-216ENST00000592395 ERCC8Q13216 396 aa13.39□□□□□ -0.27
TCF3-216ENST00000592395 FAM74A1Q5RGS3 127 aa13.39□□□□□ -0.27
TCF3-216ENST00000592395 AGPAT4-IT1Q9H0P7 198 aa13.39□□□□□ -0.27
TCF3-216ENST00000592395 OTORQ9NRC9 128 aa13.39□□□□□ -0.27
TCF3-216ENST00000592395 LOC102723971A0A1B0GUV8 181 aa13.38□□□□□ -0.27
TCF3-216ENST00000592395 CXorf1O96002 111 aa13.38□□□□□ -0.27
TCF3-216ENST00000592395 GCHFRP30047 84 aa13.38□□□□□ -0.27
TCF3-216ENST00000592395 TMEM78Q5T7P6 136 aa13.38□□□□□ -0.27
TCF3-216ENST00000592395 RXFP4Q8TDU9 374 aa13.38□□□□□ -0.27
TCF3-216ENST00000592395 PHLDA1Q8WV24 401 aaPredicted RBP13.38□□□□□ -0.27
TCF3-216ENST00000592395 CTXND1A0A1B0GTU2 59 aa13.37□□□□□ -0.27
TCF3-216ENST00000592395 RBAKDNA6NC62 111 aa13.37□□□□□ -0.27
TCF3-216ENST00000592395 SLC25A5P05141 298 aaKnown RBP13.37□□□□□ -0.27
TCF3-216ENST00000592395 KIR3DS1Q14943 382 aa13.37□□□□□ -0.27
TCF3-216ENST00000592395 GFI1BQ5VTD9 330 aa13.37□□□□□ -0.27
TCF3-216ENST00000592395 CEMP1Q6PRD7 247 aaPredicted RBP13.37□□□□□ -0.27
TCF3-216ENST00000592395 SSX7Q7RTT5 188 aa13.37□□□□□ -0.27
TCF3-216ENST00000592395 SUN5Q8TC36 379 aa13.37□□□□□ -0.27
TCF3-216ENST00000592395 FAM19A4Q96LR4 140 aa13.37□□□□□ -0.27
TCF3-216ENST00000592395 LINC01587Q99440 93 aa13.37□□□□□ -0.27
TCF3-216ENST00000592395 VGLL1Q99990 258 aa13.37□□□□□ -0.27
TCF3-216ENST00000592395 ZNF471Q9BX82 626 aaPredicted RBP13.37□□□□□ -0.27
TCF3-216ENST00000592395 CELA1Q9UNI1 258 aa13.37□□□□□ -0.27
TCF3-216ENST00000592395 CSMD3Q7Z407 3707 aa13.37□□□□□ -0.27
TCF3-216ENST00000592395 STARD9Q9P2P6 4700 aa13.37□□□□□ -0.27
TCF3-216ENST00000592395 hCG_2014768A0A024R1R8 64 aa13.36□□□□□ -0.27
TCF3-216ENST00000592395 PGPA6NDG6 321 aa13.36□□□□□ -0.27
TCF3-216ENST00000592395 ZNF705GA8MUZ8 300 aaPredicted RBP13.36□□□□□ -0.27
TCF3-216ENST00000592395 DIRC3C9JPN6 131 aa13.36□□□□□ -0.27
TCF3-216ENST00000592395 H7BYZ3 331 aa13.36□□□□□ -0.27
TCF3-216ENST00000592395 PFDN1O60925 122 aa13.36□□□□□ -0.27
TCF3-216ENST00000592395 EMP1P54849 157 aa13.36□□□□□ -0.27
TCF3-216ENST00000592395 TAS2R60P59551 318 aa13.36□□□□□ -0.27
TCF3-216ENST00000592395 ZNF726P1Q15940 193 aa13.36□□□□□ -0.27
TCF3-216ENST00000592395 TMUB2Q71RG4 321 aa13.36□□□□□ -0.27
TCF3-216ENST00000592395 ARL6IP6Q8N6S5 226 aa13.36□□□□□ -0.27
TCF3-216ENST00000592395 CMTM2Q8TAZ6 248 aa13.36□□□□□ -0.27
TCF3-216ENST00000592395 HYLS1Q96M11 299 aa13.36□□□□□ -0.27
TCF3-216ENST00000592395 TMEM167BQ9NRX6 74 aa13.36□□□□□ -0.27
TCF3-216ENST00000592395 ZNF492Q9P255 531 aa13.36□□□□□ -0.27
TCF3-216ENST00000592395 TEX48A0A1B0GUV7 120 aa13.35□□□□□ -0.27
TCF3-216ENST00000592395 J3KRW8 73 aa13.35□□□□□ -0.27
TCF3-216ENST00000592395 SEC11BP0C7V7 166 aa13.35□□□□□ -0.27
TCF3-216ENST00000592395 SPART-AS1P0CW21 52 aa13.35□□□□□ -0.27
TCF3-216ENST00000592395 CRISP2P16562 243 aa13.35□□□□□ -0.27
TCF3-216ENST00000592395 EIF5AP63241 154 aaKnown RBP13.35□□□□□ -0.27
TCF3-216ENST00000592395 AKAP14Q86UN6 197 aa13.35□□□□□ -0.27
TCF3-216ENST00000592395 KLK5Q9Y337 293 aaPredicted RBP13.35□□□□□ -0.27
TCF3-216ENST00000592395 TRBV7-9A0A0J9YWB2 115 aa13.34□□□□□ -0.27
TCF3-216ENST00000592395 KLLNB2CW77 178 aa13.34□□□□□ -0.27
TCF3-216ENST00000592395 C1QBP02746 253 aa13.34□□□□□ -0.27
TCF3-216ENST00000592395 NMBP08949 121 aa13.34□□□□□ -0.27
TCF3-216ENST00000592395 ZNF138P52744 262 aa13.34□□□□□ -0.27
TCF3-216ENST00000592395 MRPL18Q9H0U6 180 aaKnown RBP13.34□□□□□ -0.27
TCF3-216ENST00000592395 DKK2Q9UBU2 259 aa13.34□□□□□ -0.27
TCF3-216ENST00000592395 YTHDF2Q9Y5A9 579 aaKnown RBP13.34□□□□□ -0.27
TCF3-216ENST00000592395 TRAV12-3A0A0B4J271 114 aa13.33□□□□□ -0.28
TCF3-216ENST00000592395 C7orf71A4D174 169 aa13.33□□□□□ -0.28
TCF3-216ENST00000592395 C11orf94C9JXX5 98 aa13.33□□□□□ -0.28
TCF3-216ENST00000592395 PRM2P04554 102 aa13.33□□□□□ -0.28
TCF3-216ENST00000592395 C12orf74Q32Q52 190 aa13.33□□□□□ -0.28
TCF3-216ENST00000592395 Q6ZTC4 211 aa13.33□□□□□ -0.28
TCF3-216ENST00000592395 IQCF2Q8IXL9 164 aa13.33□□□□□ -0.28
TCF3-216ENST00000592395 NIPSNAP3BQ9BS92 247 aa13.33□□□□□ -0.28
TCF3-216ENST00000592395 RPH3ALQ9UNE2 315 aa13.33□□□□□ -0.28
TCF3-216ENST00000592395 UMAD1C9J7I0 102 aa13.32□□□□□ -0.28
TCF3-216ENST00000592395 GPX1P07203 203 aa13.32□□□□□ -0.28
TCF3-216ENST00000592395 HTN1P15515 57 aa13.32□□□□□ -0.28
TCF3-216ENST00000592395 AZU1P20160 251 aa13.32□□□□□ -0.28
TCF3-216ENST00000592395 FAM222AQ5U5X8 452 aa13.32□□□□□ -0.28
TCF3-216ENST00000592395 ZFAND2AQ8N6M9 145 aa13.32□□□□□ -0.28
TCF3-216ENST00000592395 C5orf17Q8NAS9 161 aa13.32□□□□□ -0.28
TCF3-216ENST00000592395 Q8TAT8 98 aa13.32□□□□□ -0.28
TCF3-216ENST00000592395 C16orf74Q96GX8 76 aa13.32□□□□□ -0.28
TCF3-216ENST00000592395 TENM2Q9NT68 2774 aa13.31□□□□□ -0.28
TCF3-216ENST00000592395 MAP1LC3B2A6NCE7 125 aa13.31□□□□□ -0.28
TCF3-216ENST00000592395 TPT1P13693 172 aaKnown RBP13.31□□□□□ -0.28
TCF3-216ENST00000592395 CD300CQ08708 224 aa13.31□□□□□ -0.28
TCF3-216ENST00000592395 BTN1A1Q13410 526 aa13.31□□□□□ -0.28
TCF3-216ENST00000592395 LGALSLQ3ZCW2 172 aaPredicted RBP13.31□□□□□ -0.28
TCF3-216ENST00000592395 ZNF493Q6ZR52 646 aa13.31□□□□□ -0.28
TCF3-216ENST00000592395 STOML3Q8TAV4 291 aa13.31□□□□□ -0.28
TCF3-216ENST00000592395 TMED6Q8WW62 240 aa13.31□□□□□ -0.28
TCF3-216ENST00000592395 PYGO2Q9BRQ0 406 aa13.31□□□□□ -0.28
TCF3-216ENST00000592395 MAP1LC3BQ9GZQ8 125 aa13.31□□□□□ -0.28
TCF3-216ENST00000592395 LENEPQ9Y5L5 61 aa13.31□□□□□ -0.28
TCF3-216ENST00000592395 KMT2CQ8NEZ4 4911 aaKnown RBP13.3□□□□□ -0.28
TCF3-216ENST00000592395 TRAV10A0A0B4J240 114 aa13.3□□□□□ -0.28
TCF3-216ENST00000592395 FGF8P55075 233 aaPredicted RBP13.3□□□□□ -0.28
TCF3-216ENST00000592395 GNG5P63218 68 aa13.3□□□□□ -0.28
TCF3-216ENST00000592395 GOLT1AQ6ZVE7 132 aa13.3□□□□□ -0.28
TCF3-216ENST00000592395 ZNF767PQ75MW2 155 aa13.3□□□□□ -0.28
TCF3-216ENST00000592395 TMEM263Q8WUH6 116 aaKnown RBP13.3□□□□□ -0.28
TCF3-216ENST00000592395 SERTM2A0A1B0GWG4 89 aa13.29□□□□□ -0.28
TCF3-216ENST00000592395 A0A1W2PRE2 83 aa13.29□□□□□ -0.28
TCF3-216ENST00000592395 PLAC8L1A1L4L8 177 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms