RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 UBE2DNLQ8IWF7 75 aa7.33□□□□□ -1.24
VPS4B-207ENST00000591519 C15orf53Q8NAA6 179 aa7.33□□□□□ -1.24
VPS4B-207ENST00000591519 HSD17B11Q8NBQ5 300 aa7.33□□□□□ -1.24
VPS4B-207ENST00000591519 INO80EQ8NBZ0 244 aaPredicted RBP7.33□□□□□ -1.24
VPS4B-207ENST00000591519 TMEM208Q9BTX3 173 aa7.33□□□□□ -1.24
VPS4B-207ENST00000591519 ZNF586Q9NXT0 402 aa7.33□□□□□ -1.24
VPS4B-207ENST00000591519 RNF24Q9Y225 148 aa7.33□□□□□ -1.24
VPS4B-207ENST00000591519 IGLV2-18A0A075B6J9 118 aa7.32□□□□□ -1.24
VPS4B-207ENST00000591519 ZNF705GA8MUZ8 300 aaPredicted RBP7.32□□□□□ -1.24
VPS4B-207ENST00000591519 M0R2Z0 102 aa7.32□□□□□ -1.24
VPS4B-207ENST00000591519 INSP01308 110 aa7.32□□□□□ -1.24
VPS4B-207ENST00000591519 PRM2P04554 102 aa7.32□□□□□ -1.24
VPS4B-207ENST00000591519 IGLC2P0DOY2 106 aa7.32□□□□□ -1.24
VPS4B-207ENST00000591519 HTN3P15516 51 aa7.32□□□□□ -1.24
VPS4B-207ENST00000591519 PSG3Q16557 428 aa7.32□□□□□ -1.24
VPS4B-207ENST00000591519 SPINK13Q1W4C9 94 aa7.32□□□□□ -1.24
VPS4B-207ENST00000591519 SOHLH1Q5JUK2 328 aa7.32□□□□□ -1.24
VPS4B-207ENST00000591519 LCN15Q6UWW0 184 aa7.32□□□□□ -1.24
VPS4B-207ENST00000591519 ASB13Q8WXK3 278 aa7.32□□□□□ -1.24
VPS4B-207ENST00000591519 AQP10Q96PS8 301 aa7.32□□□□□ -1.24
VPS4B-207ENST00000591519 SLC25A2Q9BXI2 301 aa7.32□□□□□ -1.24
VPS4B-207ENST00000591519 ZNF331Q9NQX6 463 aaPredicted RBP7.32□□□□□ -1.24
VPS4B-207ENST00000591519 hCG_2014768A0A024R1R8 64 aa7.31□□□□□ -1.24
VPS4B-207ENST00000591519 PRAC2D3DTV9 90 aa7.31□□□□□ -1.24
VPS4B-207ENST00000591519 G3V3Q6 166 aa7.31□□□□□ -1.24
VPS4B-207ENST00000591519 ARPC5O15511 151 aa7.31□□□□□ -1.24
VPS4B-207ENST00000591519 OR7C2O60412 319 aa7.31□□□□□ -1.24
VPS4B-207ENST00000591519 OR10J4P0C629 311 aa7.31□□□□□ -1.24
VPS4B-207ENST00000591519 AZU1P20160 251 aa7.31□□□□□ -1.24
VPS4B-207ENST00000591519 RAB2AP61019 212 aa7.31□□□□□ -1.24
VPS4B-207ENST00000591519 RHOBP62745 196 aa7.31□□□□□ -1.24
VPS4B-207ENST00000591519 C1orf134Q5TEV5 83 aa7.31□□□□□ -1.24
VPS4B-207ENST00000591519 FAM122CQ6P4D5 195 aa7.31□□□□□ -1.24
VPS4B-207ENST00000591519 TMEM256Q8N2U0 113 aa7.31□□□□□ -1.24
VPS4B-207ENST00000591519 OR8A1Q8NGG7 326 aa7.31□□□□□ -1.24
VPS4B-207ENST00000591519 RPUSD4Q96CM3 377 aaKnown RBP7.31□□□□□ -1.24
VPS4B-207ENST00000591519 SLC50A1Q9BRV3 221 aa7.31□□□□□ -1.24
VPS4B-207ENST00000591519 PPP1R14DQ9NXH3 145 aa7.31□□□□□ -1.24
VPS4B-207ENST00000591519 TNFSF18Q9UNG2 199 aa7.31□□□□□ -1.24
VPS4B-207ENST00000591519 FUT9Q9Y231 359 aa7.31□□□□□ -1.24
VPS4B-207ENST00000591519 TIMM9Q9Y5J7 89 aa7.31□□□□□ -1.24
VPS4B-207ENST00000591519 PKHD1P08F94 4074 aa7.31□□□□□ -1.24
VPS4B-207ENST00000591519 PKD1P98161 4303 aa7.31□□□□□ -1.24
VPS4B-207ENST00000591519 RNF222A6NCQ9 220 aa7.3□□□□□ -1.24
VPS4B-207ENST00000591519 CBY3A6NI87 242 aa7.3□□□□□ -1.24
VPS4B-207ENST00000591519 BOLA2-SMG1P6H3BVE0 249 aa7.3□□□□□ -1.24
VPS4B-207ENST00000591519 HMGB3O15347 200 aaKnown RBP7.3□□□□□ -1.24
VPS4B-207ENST00000591519 HIST1H1EP10412 219 aaKnown RBP7.3□□□□□ -1.24
VPS4B-207ENST00000591519 CXCL2P19875 107 aa7.3□□□□□ -1.24
VPS4B-207ENST00000591519 ATP6V0CP27449 155 aa7.3□□□□□ -1.24
VPS4B-207ENST00000591519 TAS2R60P59551 318 aa7.3□□□□□ -1.24
VPS4B-207ENST00000591519 ZNF266Q14584 549 aa7.3□□□□□ -1.24
VPS4B-207ENST00000591519 ACOT6Q3I5F7 207 aaPredicted RBP7.3□□□□□ -1.24
VPS4B-207ENST00000591519 RPL7L1Q6DKI1 246 aaKnown RBP7.3□□□□□ -1.24
VPS4B-207ENST00000591519 EXOC3-AS1Q8N2X6 119 aa7.3□□□□□ -1.24
VPS4B-207ENST00000591519 FAM167A-AS1Q96KT0 104 aa7.3□□□□□ -1.24
VPS4B-207ENST00000591519 PAXXQ9BUH6 204 aa7.3□□□□□ -1.24
VPS4B-207ENST00000591519 MRPL32Q9BYC8 188 aaKnown RBP7.3□□□□□ -1.24
VPS4B-207ENST00000591519 PARD6GQ9BYG4 376 aaPredicted RBP7.3□□□□□ -1.24
VPS4B-207ENST00000591519 SH3BGRL3Q9H299 93 aa7.3□□□□□ -1.24
VPS4B-207ENST00000591519 OR51M1Q9H341 326 aa7.3□□□□□ -1.24
VPS4B-207ENST00000591519 TMEM14CQ9P0S9 112 aa7.3□□□□□ -1.24
VPS4B-207ENST00000591519 TRBV19A0A075B6N1 114 aa7.29□□□□□ -1.24
VPS4B-207ENST00000591519 TRAV12-2A0A075B6T6 113 aa7.29□□□□□ -1.24
VPS4B-207ENST00000591519 A0A1W2PPV4 95 aa7.29□□□□□ -1.24
VPS4B-207ENST00000591519 J3KRW8 73 aa7.29□□□□□ -1.24
VPS4B-207ENST00000591519 DEFB130BP0DP73 79 aa7.29□□□□□ -1.24
VPS4B-207ENST00000591519 DEFB130AP0DP74 79 aa7.29□□□□□ -1.24
VPS4B-207ENST00000591519 UBE2L3P68036 154 aaKnown RBP7.29□□□□□ -1.24
VPS4B-207ENST00000591519 GUK1Q16774 197 aa7.29□□□□□ -1.24
VPS4B-207ENST00000591519 ZNF493Q6ZR52 646 aa7.29□□□□□ -1.24
VPS4B-207ENST00000591519 BAP18Q8IXM2 172 aa7.29□□□□□ -1.24
VPS4B-207ENST00000591519 OR10G4Q8NGN3 311 aa7.29□□□□□ -1.24
VPS4B-207ENST00000591519 OR10G9Q8NGN4 311 aa7.29□□□□□ -1.24
VPS4B-207ENST00000591519 OR10G7Q8NGN6 311 aa7.29□□□□□ -1.24
VPS4B-207ENST00000591519 ZNRF2Q8NHG8 242 aa7.29□□□□□ -1.24
VPS4B-207ENST00000591519 SAT2Q96F10 170 aaPredicted RBP7.29□□□□□ -1.24
VPS4B-207ENST00000591519 LINC01587Q99440 93 aa7.29□□□□□ -1.24
VPS4B-207ENST00000591519 DNAH11Q96DT5 4516 aa7.28□□□□□ -1.24
VPS4B-207ENST00000591519 BORCS7-ASMTA0A0B4J1R7 106 aa7.28□□□□□ -1.24
VPS4B-207ENST00000591519 M0R3E3 92 aa7.28□□□□□ -1.24
VPS4B-207ENST00000591519 NDUFB4O95168 129 aa7.28□□□□□ -1.24
VPS4B-207ENST00000591519 ATP5G1P05496 136 aa7.28□□□□□ -1.24
VPS4B-207ENST00000591519 NBEAP1P0C6P0 100 aa7.28□□□□□ -1.24
VPS4B-207ENST00000591519 M6PRP20645 277 aa7.28□□□□□ -1.24
VPS4B-207ENST00000591519 CDKN1BP46527 198 aa7.28□□□□□ -1.24
VPS4B-207ENST00000591519 ATP5G3P48201 142 aa7.28□□□□□ -1.24
VPS4B-207ENST00000591519 ERCC8Q13216 396 aa7.28□□□□□ -1.24
VPS4B-207ENST00000591519 ICAM4Q14773 271 aa7.28□□□□□ -1.24
VPS4B-207ENST00000591519 KHDC3LQ587J8 217 aa7.28□□□□□ -1.24
VPS4B-207ENST00000591519 OR10J6PQ8NGY7 276 aa7.28□□□□□ -1.24
VPS4B-207ENST00000591519 RNF141Q8WVD5 230 aa7.28□□□□□ -1.24
VPS4B-207ENST00000591519 FXYD5Q96DB9 178 aa7.28□□□□□ -1.24
VPS4B-207ENST00000591519 ZNF503Q96F45 646 aa7.28□□□□□ -1.24
VPS4B-207ENST00000591519 PHYHIPLQ96FC7 376 aa7.28□□□□□ -1.24
VPS4B-207ENST00000591519 C20orf144Q9BQM9 153 aa7.28□□□□□ -1.24
VPS4B-207ENST00000591519 TIMM8BQ9Y5J9 83 aaPredicted RBP7.28□□□□□ -1.24
VPS4B-207ENST00000591519 F5H768 121 aa7.27□□□□□ -1.25
VPS4B-207ENST00000591519 TAS2R45P59539 299 aa7.27□□□□□ -1.25
VPS4B-207ENST00000591519 LINC00612Q8N6U2 182 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms