RNA–Protein interactions for RNA: ENST00000590239.5

DDX39A-211, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 565 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-211ENST00000590239 TMEM78Q5T7P6 136 aa11.24□□□□□ -0.61
DDX39A-211ENST00000590239 APRG1Q8IVJ8 170 aa11.24□□□□□ -0.61
DDX39A-211ENST00000590239 LINC00479Q96M42 142 aa11.24□□□□□ -0.61
DDX39A-211ENST00000590239 DERL1Q9BUN8 251 aa11.24□□□□□ -0.61
DDX39A-211ENST00000590239 AGPAT4-IT1Q9H0P7 198 aa11.24□□□□□ -0.61
DDX39A-211ENST00000590239 PARLQ9H300 379 aa11.24□□□□□ -0.61
DDX39A-211ENST00000590239 PPP1R14DQ9NXH3 145 aa11.24□□□□□ -0.61
DDX39A-211ENST00000590239 HLA-DRB4X5D2U9 266 aa11.24□□□□□ -0.61
DDX39A-211ENST00000590239 NOTCH1P46531 2555 aa11.23□□□□□ -0.61
DDX39A-211ENST00000590239 TRAV8-1A0A0A6YYK1 113 aa11.23□□□□□ -0.61
DDX39A-211ENST00000590239 TRAV34A0A0B4J273 112 aa11.23□□□□□ -0.61
DDX39A-211ENST00000590239 TMEM218A2RU14 115 aa11.23□□□□□ -0.61
DDX39A-211ENST00000590239 KNCNA6PVL3 124 aa11.23□□□□□ -0.61
DDX39A-211ENST00000590239 A8MTW9 85 aa11.23□□□□□ -0.61
DDX39A-211ENST00000590239 H3BMM0 161 aa11.23□□□□□ -0.61
DDX39A-211ENST00000590239 ZNF705DP0CH99 300 aaPredicted RBP11.23□□□□□ -0.61
DDX39A-211ENST00000590239 ZNF705BP0CI00 300 aaPredicted RBP11.23□□□□□ -0.61
DDX39A-211ENST00000590239 PRB4P10163 310 aaPredicted RBP11.23□□□□□ -0.61
DDX39A-211ENST00000590239 ZNF138P52744 262 aa11.23□□□□□ -0.61
DDX39A-211ENST00000590239 KRTAP10-11P60412 298 aa11.23□□□□□ -0.61
DDX39A-211ENST00000590239 ERCC8Q13216 396 aa11.23□□□□□ -0.61
DDX39A-211ENST00000590239 ACTL10Q5JWF8 245 aa11.23□□□□□ -0.61
DDX39A-211ENST00000590239 GDF5OSQ5U4N7 250 aa11.23□□□□□ -0.61
DDX39A-211ENST00000590239 Q8N1Y9 231 aa11.23□□□□□ -0.61
DDX39A-211ENST00000590239 CITED4Q96RK1 184 aa11.23□□□□□ -0.61
DDX39A-211ENST00000590239 PSG8Q9UQ74 426 aa11.23□□□□□ -0.61
DDX39A-211ENST00000590239 LENEPQ9Y5L5 61 aa11.23□□□□□ -0.61
DDX39A-211ENST00000590239 TRBV7-9A0A0J9YWB2 115 aa11.22□□□□□ -0.61
DDX39A-211ENST00000590239 ZNF124Q15973 351 aa11.22□□□□□ -0.61
DDX39A-211ENST00000590239 KPRPQ5T749 579 aaPredicted RBP11.22□□□□□ -0.61
DDX39A-211ENST00000590239 Q86TA4 180 aa11.22□□□□□ -0.61
DDX39A-211ENST00000590239 ODF3Q96PU9 254 aa11.22□□□□□ -0.61
DDX39A-211ENST00000590239 SMIM7Q9BQ49 75 aa11.22□□□□□ -0.61
DDX39A-211ENST00000590239 ZNF492Q9P255 531 aa11.22□□□□□ -0.61
DDX39A-211ENST00000590239 ZFP30Q9Y2G7 519 aa11.22□□□□□ -0.61
DDX39A-211ENST00000590239 CMYA5Q8N3K9 4069 aa11.21□□□□□ -0.61
DDX39A-211ENST00000590239 ZNF727A8MUV8 499 aa11.21□□□□□ -0.61
DDX39A-211ENST00000590239 C9JCJ5 164 aa11.21□□□□□ -0.61
DDX39A-211ENST00000590239 LTAP01374 205 aa11.21□□□□□ -0.61
DDX39A-211ENST00000590239 CT45A10P0DMU9 189 aa11.21□□□□□ -0.61
DDX39A-211ENST00000590239 GNG4P50150 75 aa11.21□□□□□ -0.61
DDX39A-211ENST00000590239 ZNF674Q2M3X9 581 aa11.21□□□□□ -0.61
DDX39A-211ENST00000590239 CENPWQ5EE01 88 aa11.21□□□□□ -0.61
DDX39A-211ENST00000590239 SAPCD1Q5SSQ6 148 aa11.21□□□□□ -0.61
DDX39A-211ENST00000590239 PRNTQ86SH4 94 aa11.21□□□□□ -0.61
DDX39A-211ENST00000590239 SGK494Q96LW2 274 aa11.21□□□□□ -0.61
DDX39A-211ENST00000590239 IGF2BP2-AS1Q96M15 143 aa11.21□□□□□ -0.61
DDX39A-211ENST00000590239 PRR25Q96S07 402 aa11.21□□□□□ -0.61
DDX39A-211ENST00000590239 MGAM2Q2M2H8 2515 aa11.2□□□□□ -0.62
DDX39A-211ENST00000590239 TRBV20OR9-2A0A075B6H5 130 aa11.2□□□□□ -0.62
DDX39A-211ENST00000590239 TRPT1Q86TN4 253 aaKnown RBP11.2□□□□□ -0.62
DDX39A-211ENST00000590239 BAGE2Q86Y30 109 aa11.2□□□□□ -0.62
DDX39A-211ENST00000590239 STHQ8IWL8 128 aa11.2□□□□□ -0.62
DDX39A-211ENST00000590239 OR4B1Q8NGF8 309 aa11.2□□□□□ -0.62
DDX39A-211ENST00000590239 Q8TAT8 98 aa11.2□□□□□ -0.62
DDX39A-211ENST00000590239 SMIM12Q96EX1 92 aa11.2□□□□□ -0.62
DDX39A-211ENST00000590239 FAM19A4Q96LR4 140 aa11.2□□□□□ -0.62
DDX39A-211ENST00000590239 NDFIP1Q9BT67 221 aa11.2□□□□□ -0.62
DDX39A-211ENST00000590239 WFDC10AQ9H1F0 79 aa11.2□□□□□ -0.62
DDX39A-211ENST00000590239 LY96Q9Y6Y9 160 aa11.2□□□□□ -0.62
DDX39A-211ENST00000590239 AMTNQ6UX39 209 aa11.19□□□□□ -0.62
DDX39A-211ENST00000590239 DEFB125Q8N687 156 aa11.19□□□□□ -0.62
DDX39A-211ENST00000590239 TVP23CQ96ET8 276 aa11.19□□□□□ -0.62
DDX39A-211ENST00000590239 SEC11CQ9BY50 192 aa11.19□□□□□ -0.62
DDX39A-211ENST00000590239 KRBOX1C9JBD0 128 aa11.18□□□□□ -0.62
DDX39A-211ENST00000590239 F8W036 122 aa11.18□□□□□ -0.62
DDX39A-211ENST00000590239 IGKV3-20P01619 116 aa11.18□□□□□ -0.62
DDX39A-211ENST00000590239 CRISP2P16562 243 aa11.18□□□□□ -0.62
DDX39A-211ENST00000590239 TSPOP30536 169 aa11.18□□□□□ -0.62
DDX39A-211ENST00000590239 LEPP41159 167 aa11.18□□□□□ -0.62
DDX39A-211ENST00000590239 TMEM241Q24JQ0 296 aa11.18□□□□□ -0.62
DDX39A-211ENST00000590239 C10orf91Q5T1B1 145 aa11.18□□□□□ -0.62
DDX39A-211ENST00000590239 COX8CQ7Z4L0 72 aa11.18□□□□□ -0.62
DDX39A-211ENST00000590239 TMEM183AQ8IXX5 376 aa11.18□□□□□ -0.62
DDX39A-211ENST00000590239 NIPSNAP3BQ9BS92 247 aa11.18□□□□□ -0.62
DDX39A-211ENST00000590239 MLST8Q9BVC4 326 aa11.18□□□□□ -0.62
DDX39A-211ENST00000590239 IGLV2-8P01709 118 aa11.17□□□□□ -0.62
DDX39A-211ENST00000590239 SRD5A3Q9H8P0 318 aa11.17□□□□□ -0.62
DDX39A-211ENST00000590239 NAT8Q9UHE5 227 aa11.17□□□□□ -0.62
DDX39A-211ENST00000590239 RBMY1BA6NDE4 496 aaKnown RBP11.16□□□□□ -0.62
DDX39A-211ENST00000590239 RBMY1EA6NEQ0 496 aaKnown RBP11.16□□□□□ -0.62
DDX39A-211ENST00000590239 AMBPP02760 352 aa11.16□□□□□ -0.62
DDX39A-211ENST00000590239 RBMY1DP0C7P1 496 aaKnown RBP11.16□□□□□ -0.62
DDX39A-211ENST00000590239 ADCYAP1P18509 176 aa11.16□□□□□ -0.62
DDX39A-211ENST00000590239 NUTF2P61970 127 aaKnown RBP11.16□□□□□ -0.62
DDX39A-211ENST00000590239 MORN3Q6PF18 240 aaPredicted RBP11.16□□□□□ -0.62
DDX39A-211ENST00000590239 ZFAND2AQ8N6M9 145 aa11.16□□□□□ -0.62
DDX39A-211ENST00000590239 OCC1Q8TAD7 63 aa11.16□□□□□ -0.62
DDX39A-211ENST00000590239 CARHSP1Q9Y2V2 147 aaKnown RBP11.16□□□□□ -0.62
DDX39A-211ENST00000590239 KLLNB2CW77 178 aa11.15□□□□□ -0.62
DDX39A-211ENST00000590239 CDKN1BP46527 198 aa11.15□□□□□ -0.62
DDX39A-211ENST00000590239 SMUG1Q53HV7 270 aa11.15□□□□□ -0.62
DDX39A-211ENST00000590239 C8orf49Q96NF6 230 aa11.15□□□□□ -0.62
DDX39A-211ENST00000590239 ASCL2Q99929 193 aa11.15□□□□□ -0.62
DDX39A-211ENST00000590239 TUBA4BQ9H853 241 aa11.15□□□□□ -0.62
DDX39A-211ENST00000590239 SDF2L1Q9HCN8 221 aa11.15□□□□□ -0.62
DDX39A-211ENST00000590239 BIN3Q9NQY0 253 aa11.15□□□□□ -0.62
DDX39A-211ENST00000590239 AGRNO00468 2067 aa11.15□□□□□ -0.63
DDX39A-211ENST00000590239 PGPEP1LA6NFU8 196 aa11.14□□□□□ -0.63
DDX39A-211ENST00000590239 A8MZ25 164 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms