RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 KRTAP10-1P60331 282 aa12.52□□□□□ -0.41
CCDC43-204ENST00000588687 IBA57Q5T440 356 aaKnown RBP12.52□□□□□ -0.41
CCDC43-204ENST00000588687 Q5VSD8 79 aa12.52□□□□□ -0.41
CCDC43-204ENST00000588687 Q6ZQT7 251 aa12.52□□□□□ -0.41
CCDC43-204ENST00000588687 Q6ZRG5 221 aa12.52□□□□□ -0.41
CCDC43-204ENST00000588687 ZFAND2AQ8N6M9 145 aa12.52□□□□□ -0.41
CCDC43-204ENST00000588687 AGPAT4-IT1Q9H0P7 198 aa12.52□□□□□ -0.41
CCDC43-204ENST00000588687 TMEM14CQ9P0S9 112 aa12.52□□□□□ -0.41
CCDC43-204ENST00000588687 TP53TG3Q9ULZ0 132 aa12.52□□□□□ -0.41
CCDC43-204ENST00000588687 ICOSQ9Y6W8 199 aa12.52□□□□□ -0.41
CCDC43-204ENST00000588687 CST7O76096 145 aa12.51□□□□□ -0.41
CCDC43-204ENST00000588687 INAFM2P0DMQ5 153 aa12.51□□□□□ -0.41
CCDC43-204ENST00000588687 RPL29P47914 159 aaKnown RBP12.51□□□□□ -0.41
CCDC43-204ENST00000588687 SPANXN2Q5MJ10 180 aa12.51□□□□□ -0.41
CCDC43-204ENST00000588687 TRIQKQ629K1 86 aa12.51□□□□□ -0.41
CCDC43-204ENST00000588687 OR1L4Q8NGR5 311 aa12.51□□□□□ -0.41
CCDC43-204ENST00000588687 PFDN5Q99471 154 aa12.51□□□□□ -0.41
CCDC43-204ENST00000588687 VGLL1Q99990 258 aa12.51□□□□□ -0.41
CCDC43-204ENST00000588687 A0A087WTM6 91 aa12.5□□□□□ -0.41
CCDC43-204ENST00000588687 PAX4O43316 350 aa12.5□□□□□ -0.41
CCDC43-204ENST00000588687 CRYBA4P53673 196 aa12.5□□□□□ -0.41
CCDC43-204ENST00000588687 PDE6HQ13956 83 aa12.5□□□□□ -0.41
CCDC43-204ENST00000588687 C9orf47Q6ZRZ4 202 aa12.5□□□□□ -0.41
CCDC43-204ENST00000588687 CHAC2Q8WUX2 184 aa12.5□□□□□ -0.41
CCDC43-204ENST00000588687 LINC00477Q96M19 166 aa12.5□□□□□ -0.41
CCDC43-204ENST00000588687 SLC39A9Q9NUM3 307 aa12.5□□□□□ -0.41
CCDC43-204ENST00000588687 UQCC1Q9NVA1 299 aa12.5□□□□□ -0.41
CCDC43-204ENST00000588687 MRPL16Q9NX20 251 aaKnown RBP12.5□□□□□ -0.41
CCDC43-204ENST00000588687 IGHV3-53P01767 116 aa12.49□□□□□ -0.41
CCDC43-204ENST00000588687 NMBP08949 121 aa12.49□□□□□ -0.41
CCDC43-204ENST00000588687 PYYP10082 97 aa12.49□□□□□ -0.41
CCDC43-204ENST00000588687 RNASE4P34096 147 aaKnown RBP12.49□□□□□ -0.41
CCDC43-204ENST00000588687 RAB31Q13636 194 aa12.49□□□□□ -0.41
CCDC43-204ENST00000588687 FHL2Q14192 279 aa12.49□□□□□ -0.41
CCDC43-204ENST00000588687 LYPD5Q6UWN5 251 aa12.49□□□□□ -0.41
CCDC43-204ENST00000588687 EXOC3-AS1Q8N2X6 119 aa12.49□□□□□ -0.41
CCDC43-204ENST00000588687 PRO0255Q9UI72 69 aa12.49□□□□□ -0.41
CCDC43-204ENST00000588687 IGKV2-40A0A087WW87 121 aaPredicted RBP12.48□□□□□ -0.41
CCDC43-204ENST00000588687 UBE2L5PA0A1B0GUS4 154 aa12.48□□□□□ -0.41
CCDC43-204ENST00000588687 FAM24AA6NFZ4 105 aa12.48□□□□□ -0.41
CCDC43-204ENST00000588687 MPDU1O75352 247 aa12.48□□□□□ -0.41
CCDC43-204ENST00000588687 IGKV2D-40P01614 121 aaPredicted RBP12.48□□□□□ -0.41
CCDC43-204ENST00000588687 HIST1H1EP10412 219 aaKnown RBP12.48□□□□□ -0.41
CCDC43-204ENST00000588687 CAV2P51636 162 aa12.48□□□□□ -0.41
CCDC43-204ENST00000588687 C20orf85Q9H1P6 137 aa12.48□□□□□ -0.41
CCDC43-204ENST00000588687 PRELID1Q9Y255 219 aa12.48□□□□□ -0.41
CCDC43-204ENST00000588687 LSM5Q9Y4Y9 91 aaKnown RBP12.48□□□□□ -0.41
CCDC43-204ENST00000588687 IGSF23A1L1A6 192 aa12.47□□□□□ -0.41
CCDC43-204ENST00000588687 L7N2F9 121 aa12.47□□□□□ -0.41
CCDC43-204ENST00000588687 INPP1P49441 399 aa12.47□□□□□ -0.41
CCDC43-204ENST00000588687 VAMP2P63027 116 aa12.47□□□□□ -0.41
CCDC43-204ENST00000588687 GCSAMLQ5JQS6 135 aa12.47□□□□□ -0.41
CCDC43-204ENST00000588687 NFE4Q86UQ8 179 aa12.47□□□□□ -0.41
CCDC43-204ENST00000588687 LYRM2Q9NU23 88 aaPredicted RBP12.47□□□□□ -0.41
CCDC43-204ENST00000588687 PTTG2Q9NZH5 202 aa12.47□□□□□ -0.41
CCDC43-204ENST00000588687 EREGO14944 169 aa12.46□□□□□ -0.41
CCDC43-204ENST00000588687 IL7P13232 177 aa12.46□□□□□ -0.41
CCDC43-204ENST00000588687 IL15RAQ13261 267 aa12.46□□□□□ -0.41
CCDC43-204ENST00000588687 WFDC10BQ8IUB3 73 aa12.46□□□□□ -0.41
CCDC43-204ENST00000588687 FAM167A-AS1Q96KT0 104 aa12.46□□□□□ -0.41
CCDC43-204ENST00000588687 C8orf49Q96NF6 230 aa12.46□□□□□ -0.41
CCDC43-204ENST00000588687 SLC25A2Q9BXI2 301 aa12.46□□□□□ -0.41
CCDC43-204ENST00000588687 IGHV1OR15-1A0A075B7D0 117 aa12.45□□□□□ -0.42
CCDC43-204ENST00000588687 GPX1P07203 203 aa12.45□□□□□ -0.42
CCDC43-204ENST00000588687 SULT1A1P50225 295 aa12.45□□□□□ -0.42
CCDC43-204ENST00000588687 BCAP31P51572 246 aa12.45□□□□□ -0.42
CCDC43-204ENST00000588687 BAXQ07812 192 aa12.45□□□□□ -0.42
CCDC43-204ENST00000588687 MRPL23Q16540 153 aaKnown RBP12.45□□□□□ -0.42
CCDC43-204ENST00000588687 ZNF492Q9P255 531 aa12.45□□□□□ -0.42
CCDC43-204ENST00000588687 HHLA3Q9XRX5 114 aa12.45□□□□□ -0.42
CCDC43-204ENST00000588687 CCDC160A6NGH7 325 aa12.44□□□□□ -0.42
CCDC43-204ENST00000588687 K7EQD1 137 aa12.44□□□□□ -0.42
CCDC43-204ENST00000588687 RGS13O14921 159 aa12.44□□□□□ -0.42
CCDC43-204ENST00000588687 PLA2G10O15496 165 aa12.44□□□□□ -0.42
CCDC43-204ENST00000588687 PRAF2O60831 178 aa12.44□□□□□ -0.42
CCDC43-204ENST00000588687 SLAQ13239 276 aa12.44□□□□□ -0.42
CCDC43-204ENST00000588687 ICAM4Q14773 271 aa12.44□□□□□ -0.42
CCDC43-204ENST00000588687 NEGR1Q7Z3B1 354 aa12.44□□□□□ -0.42
CCDC43-204ENST00000588687 C12orf45Q8N5I9 185 aaPredicted RBP12.44□□□□□ -0.42
CCDC43-204ENST00000588687 TMEM252Q8N6L7 170 aa12.44□□□□□ -0.42
CCDC43-204ENST00000588687 BLNKQ8WV28 456 aa12.44□□□□□ -0.42
CCDC43-204ENST00000588687 FRZBQ92765 325 aa12.44□□□□□ -0.42
CCDC43-204ENST00000588687 LY96Q9Y6Y9 160 aa12.44□□□□□ -0.42
CCDC43-204ENST00000588687 CENPXA8MT69 81 aa12.43□□□□□ -0.42
CCDC43-204ENST00000588687 FGF7P21781 194 aa12.43□□□□□ -0.42
CCDC43-204ENST00000588687 S100A11P31949 105 aa12.43□□□□□ -0.42
CCDC43-204ENST00000588687 ZNF846Q147U1 533 aa12.43□□□□□ -0.42
CCDC43-204ENST00000588687 CNPY1Q3B7I2 92 aa12.43□□□□□ -0.42
CCDC43-204ENST00000588687 Q8TAT8 98 aa12.43□□□□□ -0.42
CCDC43-204ENST00000588687 SEC22CQ9BRL7 303 aa12.43□□□□□ -0.42
CCDC43-204ENST00000588687 NPCDR1Q9BY65 106 aa12.43□□□□□ -0.42
CCDC43-204ENST00000588687 MSRB1Q9NZV6 116 aa12.43□□□□□ -0.42
CCDC43-204ENST00000588687 TIMM9Q9Y5J7 89 aa12.43□□□□□ -0.42
CCDC43-204ENST00000588687 FAM25EA8MYX2 175 aa12.42□□□□□ -0.42
CCDC43-204ENST00000588687 ZNF415Q09FC8 603 aa12.42□□□□□ -0.42
CCDC43-204ENST00000588687 TMEM78Q5T7P6 136 aa12.42□□□□□ -0.42
CCDC43-204ENST00000588687 FAM122CQ6P4D5 195 aa12.42□□□□□ -0.42
CCDC43-204ENST00000588687 IQCF2Q8IXL9 164 aa12.42□□□□□ -0.42
CCDC43-204ENST00000588687 ZNF479Q96JC4 524 aa12.42□□□□□ -0.42
CCDC43-204ENST00000588687 C2orf50Q96LR7 162 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 105.5 ms