RNA–Protein interactions for RNA: ENST00000588323.1

VPS4B-203, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 3

Gene VPS4B, Length 463 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-203ENST00000588323 LGALS1P09382 135 aaKnown RBP1.79□□□□□ -2.12
VPS4B-203ENST00000588323 IL7P13232 177 aa1.79□□□□□ -2.12
VPS4B-203ENST00000588323 PPP1CCP36873 323 aaKnown RBP1.79□□□□□ -2.12
VPS4B-203ENST00000588323 ZNF140P52738 457 aaPredicted RBP1.79□□□□□ -2.12
VPS4B-203ENST00000588323 AKR1C2P52895 323 aa1.79□□□□□ -2.12
VPS4B-203ENST00000588323 NDUFA6P56556 154 aa1.79□□□□□ -2.12
VPS4B-203ENST00000588323 RBM11P57052 281 aaKnown RBP1.79□□□□□ -2.12
VPS4B-203ENST00000588323 TPPP2P59282 170 aa1.79□□□□□ -2.12
VPS4B-203ENST00000588323 RPS24P62847 133 aaKnown RBP1.79□□□□□ -2.12
VPS4B-203ENST00000588323 HLA-DRB3P79483 266 aa1.79□□□□□ -2.12
VPS4B-203ENST00000588323 TNFAIP6P98066 277 aaPredicted RBP1.79□□□□□ -2.12
VPS4B-203ENST00000588323 FABP5Q01469 135 aa1.79□□□□□ -2.12
VPS4B-203ENST00000588323 DEFA5Q01523 94 aa1.79□□□□□ -2.12
VPS4B-203ENST00000588323 MYL5Q02045 173 aa1.79□□□□□ -2.12
VPS4B-203ENST00000588323 IL15RAQ13261 267 aa1.79□□□□□ -2.12
VPS4B-203ENST00000588323 ENDOGQ14249 297 aaKnown RBP1.79□□□□□ -2.12
VPS4B-203ENST00000588323 HES1Q14469 280 aa1.79□□□□□ -2.12
VPS4B-203ENST00000588323 SLC25A34Q6PIV7 304 aa1.79□□□□□ -2.12
VPS4B-203ENST00000588323 ZNF705AQ6ZN79 300 aaPredicted RBP1.79□□□□□ -2.12
VPS4B-203ENST00000588323 Q6ZS92 163 aa1.79□□□□□ -2.12
VPS4B-203ENST00000588323 DAZ4Q86SG3 579 aaKnown RBP1.79□□□□□ -2.12
VPS4B-203ENST00000588323 GKN2Q86XP6 184 aa1.79□□□□□ -2.12
VPS4B-203ENST00000588323 FER1L6-AS1Q8NA97 138 aa1.79□□□□□ -2.12
VPS4B-203ENST00000588323 ZNF436-AS1Q8NC38 126 aaPredicted RBP1.79□□□□□ -2.12
VPS4B-203ENST00000588323 FDCSPQ8NFU4 85 aa1.79□□□□□ -2.12
VPS4B-203ENST00000588323 OR51T1Q8NGJ9 327 aa1.79□□□□□ -2.12
VPS4B-203ENST00000588323 OR4A5Q8NH83 315 aa1.79□□□□□ -2.12
VPS4B-203ENST00000588323 GPR146Q96CH1 333 aa1.79□□□□□ -2.12
VPS4B-203ENST00000588323 ADAT3Q96EY9 351 aaPredicted RBP1.79□□□□□ -2.12
VPS4B-203ENST00000588323 PRADC1Q9BSG0 188 aa1.79□□□□□ -2.12
VPS4B-203ENST00000588323 DERL1Q9BUN8 251 aa1.79□□□□□ -2.12
VPS4B-203ENST00000588323 TSSK6Q9BXA6 273 aa1.79□□□□□ -2.12
VPS4B-203ENST00000588323 SPANXDQ9BXN6 97 aa1.79□□□□□ -2.12
VPS4B-203ENST00000588323 CHST6Q9GZX3 395 aa1.79□□□□□ -2.12
VPS4B-203ENST00000588323 TMEM222Q9H0R3 208 aa1.79□□□□□ -2.12
VPS4B-203ENST00000588323 DAZ1Q9NQZ3 744 aaKnown RBP1.79□□□□□ -2.12
VPS4B-203ENST00000588323 SAR1AQ9NR31 198 aa1.79□□□□□ -2.12
VPS4B-203ENST00000588323 ZNF492Q9P255 531 aa1.79□□□□□ -2.12
VPS4B-203ENST00000588323 CYSLTR1Q9Y271 337 aa1.79□□□□□ -2.12
VPS4B-203ENST00000588323 WASHC3Q9Y3C0 194 aa1.79□□□□□ -2.12
VPS4B-203ENST00000588323 PXMP4Q9Y6I8 212 aa1.79□□□□□ -2.12
VPS4B-203ENST00000588323 TRIP11Q15643 1979 aa1.79□□□□□ -2.12
VPS4B-203ENST00000588323 SCN8AQ9UQD0 1980 aa1.79□□□□□ -2.12
VPS4B-203ENST00000588323 NUP214P35658 2090 aaPredicted RBP1.79□□□□□ -2.12
VPS4B-203ENST00000588323 ZGRF1Q86YA3 2104 aa1.79□□□□□ -2.12
VPS4B-203ENST00000588323 AKAP6Q13023 2319 aa1.79□□□□□ -2.12
VPS4B-203ENST00000588323 UNC13CQ8NB66 2214 aa1.78□□□□□ -2.12
VPS4B-203ENST00000588323 PLXNA2O75051 1894 aa1.78□□□□□ -2.12
VPS4B-203ENST00000588323 ZNF106Q9H2Y7 1883 aaKnown RBP1.78□□□□□ -2.12
VPS4B-203ENST00000588323 A0A087WUU8 490 aa1.78□□□□□ -2.12
VPS4B-203ENST00000588323 TMEM269A0A1B0GVZ9 245 aa1.78□□□□□ -2.12
VPS4B-203ENST00000588323 SIGLEC16A6NMB1 481 aa1.78□□□□□ -2.12
VPS4B-203ENST00000588323 OR4C45A6NMZ5 311 aa1.78□□□□□ -2.12
VPS4B-203ENST00000588323 GSTZ1O43708 216 aaPredicted RBP1.78□□□□□ -2.12
VPS4B-203ENST00000588323 LYZL6O75951 148 aa1.78□□□□□ -2.12
VPS4B-203ENST00000588323 APOC3P02656 99 aa1.78□□□□□ -2.12
VPS4B-203ENST00000588323 MT-ND4LP03901 98 aa1.78□□□□□ -2.12
VPS4B-203ENST00000588323 GYPCP04921 128 aa1.78□□□□□ -2.12
VPS4B-203ENST00000588323 HLA-DQB2P05538 268 aa1.78□□□□□ -2.12
VPS4B-203ENST00000588323 GPX1P07203 203 aa1.78□□□□□ -2.12
VPS4B-203ENST00000588323 CD14P08571 375 aa1.78□□□□□ -2.12
VPS4B-203ENST00000588323 SCTP09683 121 aa1.78□□□□□ -2.12
VPS4B-203ENST00000588323 TRAPPC2P0DI81 140 aa1.78□□□□□ -2.12
VPS4B-203ENST00000588323 TRAPPC2BP0DI82 140 aa1.78□□□□□ -2.12
VPS4B-203ENST00000588323 BCL2P10415 239 aa1.78□□□□□ -2.12
VPS4B-203ENST00000588323 PPIBP23284 216 aaKnown RBP1.78□□□□□ -2.12
VPS4B-203ENST00000588323 RPS3P23396 243 aaKnown RBP eCLIP1.78□□□□□ -2.12
VPS4B-203ENST00000588323 ATP6V0CP27449 155 aa1.78□□□□□ -2.12
VPS4B-203ENST00000588323 BRS3P32247 399 aa1.78□□□□□ -2.12
VPS4B-203ENST00000588323 GABRA3P34903 492 aa1.78□□□□□ -2.12
VPS4B-203ENST00000588323 CA7P43166 264 aa1.78□□□□□ -2.12
VPS4B-203ENST00000588323 POLR2HP52434 150 aaKnown RBP1.78□□□□□ -2.12
VPS4B-203ENST00000588323 CTBP2P56545 445 aa1.78□□□□□ -2.12
VPS4B-203ENST00000588323 SNRPD2P62316 118 aaKnown RBP1.78□□□□□ -2.12
VPS4B-203ENST00000588323 UBA52P62987 128 aaKnown RBP1.78□□□□□ -2.12
VPS4B-203ENST00000588323 MEF2BQ02080 365 aaPredicted RBP1.78□□□□□ -2.12
VPS4B-203ENST00000588323 HSD52Q0P140 79 aa1.78□□□□□ -2.12
VPS4B-203ENST00000588323 CCSMST1Q4G0I0 132 aa1.78□□□□□ -2.12
VPS4B-203ENST00000588323 MORN2Q502X0 79 aa1.78□□□□□ -2.12
VPS4B-203ENST00000588323 MEIG1Q5JSS6 88 aa1.78□□□□□ -2.12
VPS4B-203ENST00000588323 CLLU1Q5K131 121 aa1.78□□□□□ -2.12
VPS4B-203ENST00000588323 TMEM244Q5VVB8 128 aa1.78□□□□□ -2.12
VPS4B-203ENST00000588323 RPL22L1Q6P5R6 122 aaKnown RBP1.78□□□□□ -2.12
VPS4B-203ENST00000588323 ZNF880Q6PDB4 577 aa1.78□□□□□ -2.12
VPS4B-203ENST00000588323 GLIPR1L1Q6UWM5 242 aa1.78□□□□□ -2.12
VPS4B-203ENST00000588323 ZNF720Q7Z2F6 126 aa1.78□□□□□ -2.12
VPS4B-203ENST00000588323 C1orf158Q8N1D5 194 aa1.78□□□□□ -2.12
VPS4B-203ENST00000588323 SVBPQ8N300 66 aa1.78□□□□□ -2.12
VPS4B-203ENST00000588323 TEX29Q8N6K0 151 aa1.78□□□□□ -2.12
VPS4B-203ENST00000588323 PACRGLQ8N7B6 248 aa1.78□□□□□ -2.12
VPS4B-203ENST00000588323 ZNF615Q8N8J6 731 aa1.78□□□□□ -2.12
VPS4B-203ENST00000588323 ST20-AS1Q8NBB2 130 aa1.78□□□□□ -2.12
VPS4B-203ENST00000588323 APCDD1LQ8NCL9 501 aa1.78□□□□□ -2.12
VPS4B-203ENST00000588323 LY6G5BQ8NDX9 201 aa1.78□□□□□ -2.12
VPS4B-203ENST00000588323 WFDC11Q8NEX6 87 aa1.78□□□□□ -2.12
VPS4B-203ENST00000588323 OR11G2Q8NGC1 345 aa1.78□□□□□ -2.12
VPS4B-203ENST00000588323 SLC25A40Q8TBP6 338 aa1.78□□□□□ -2.12
VPS4B-203ENST00000588323 WFDC5Q8TCV5 224 aa1.78□□□□□ -2.12
VPS4B-203ENST00000588323 PP6455Q8WZ26 134 aa1.78□□□□□ -2.12
VPS4B-203ENST00000588323 KLK6Q92876 244 aa1.78□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms