RNA–Protein interactions for RNA: ENST00000588210.1

CCDC43-203, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC43, Length 2,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-203ENST00000588210 TRBV19A0A075B6N1 114 aa11.38□□□□□ -0.59
CCDC43-203ENST00000588210 H3BUX3 64 aa11.38□□□□□ -0.59
CCDC43-203ENST00000588210 LINC00614P0C842 121 aa11.38□□□□□ -0.59
CCDC43-203ENST00000588210 TSPOP30536 169 aa11.38□□□□□ -0.59
CCDC43-203ENST00000588210 KRTAP24-1Q3LI83 254 aa11.38□□□□□ -0.59
CCDC43-203ENST00000588210 CCDC144NLQ6NUI1 221 aa11.38□□□□□ -0.59
CCDC43-203ENST00000588210 BPIFA4PQ86YQ2 179 aa11.38□□□□□ -0.59
CCDC43-203ENST00000588210 CLEC5AQ9NY25 188 aa11.38□□□□□ -0.59
CCDC43-203ENST00000588210 VPREB3Q9UKI3 123 aa11.38□□□□□ -0.59
CCDC43-203ENST00000588210 ZFP30Q9Y2G7 519 aa11.38□□□□□ -0.59
CCDC43-203ENST00000588210 IGHV1-24A0A0C4DH33 117 aa11.37□□□□□ -0.59
CCDC43-203ENST00000588210 CHEK1O14757 476 aa11.37□□□□□ -0.59
CCDC43-203ENST00000588210 TIMM23O14925 209 aa11.37□□□□□ -0.59
CCDC43-203ENST00000588210 NPSP0C0P6 89 aa11.37□□□□□ -0.59
CCDC43-203ENST00000588210 TFPI2P48307 235 aa11.37□□□□□ -0.59
CCDC43-203ENST00000588210 SPATA12Q7Z6I5 190 aa11.37□□□□□ -0.59
CCDC43-203ENST00000588210 LYPD1Q8N2G4 141 aa11.37□□□□□ -0.59
CCDC43-203ENST00000588210 GATD1Q8NB37 220 aa11.37□□□□□ -0.59
CCDC43-203ENST00000588210 OR4F17Q8NGA8 305 aa11.37□□□□□ -0.59
CCDC43-203ENST00000588210 CNIH1O95406 144 aa11.37□□□□□ -0.59
CCDC43-203ENST00000588210 HLA-DRB1P01911 266 aa11.37□□□□□ -0.59
CCDC43-203ENST00000588210 PRR31Q5SQ13 230 aa11.37□□□□□ -0.59
CCDC43-203ENST00000588210 SIGLEC15Q6ZMC9 328 aa11.37□□□□□ -0.59
CCDC43-203ENST00000588210 STPG4Q8N801 248 aa11.37□□□□□ -0.59
CCDC43-203ENST00000588210 PIFOQ8TCI5 191 aa11.37□□□□□ -0.59
CCDC43-203ENST00000588210 SH2D7A6NKC9 451 aaPredicted RBP11.36□□□□□ -0.59
CCDC43-203ENST00000588210 ZNF785A8K8V0 405 aa11.36□□□□□ -0.59
CCDC43-203ENST00000588210 NBR2O15453 112 aa11.36□□□□□ -0.59
CCDC43-203ENST00000588210 IGLL1P15814 213 aa11.36□□□□□ -0.59
CCDC43-203ENST00000588210 ZC2HC1AQ96GY0 325 aa11.36□□□□□ -0.59
CCDC43-203ENST00000588210 M0QZ24 198 aa11.36□□□□□ -0.59
CCDC43-203ENST00000588210 MRPS12O15235 138 aaKnown RBP11.36□□□□□ -0.59
CCDC43-203ENST00000588210 NDUFA3O95167 84 aa11.36□□□□□ -0.59
CCDC43-203ENST00000588210 CD24P25063 80 aa11.36□□□□□ -0.59
CCDC43-203ENST00000588210 ZNF491Q8N8L2 437 aa11.36□□□□□ -0.59
CCDC43-203ENST00000588210 CFHR4Q92496 578 aa11.36□□□□□ -0.59
CCDC43-203ENST00000588210 RNF125Q96EQ8 232 aa11.36□□□□□ -0.59
CCDC43-203ENST00000588210 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.35□□□□□ -0.59
CCDC43-203ENST00000588210 SYS1-DBNDD2H3BUS1 97 aa11.35□□□□□ -0.59
CCDC43-203ENST00000588210 K7EQM0 130 aa11.35□□□□□ -0.59
CCDC43-203ENST00000588210 OR5AL1P0C617 328 aa11.35□□□□□ -0.59
CCDC43-203ENST00000588210 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.35□□□□□ -0.59
CCDC43-203ENST00000588210 NPBQ8NG41 125 aa11.35□□□□□ -0.59
CCDC43-203ENST00000588210 A0A1B0GUT8 65 aa11.34□□□□□ -0.59
CCDC43-203ENST00000588210 WI2-2373I1.2A0A1W2PRP0 233 aa11.34□□□□□ -0.59
CCDC43-203ENST00000588210 NDUFB8O95169 186 aa11.34□□□□□ -0.59
CCDC43-203ENST00000588210 LEPROTL1O95214 131 aa11.34□□□□□ -0.59
CCDC43-203ENST00000588210 PSG3Q16557 428 aa11.34□□□□□ -0.59
CCDC43-203ENST00000588210 PSG8Q9UQ74 426 aa11.34□□□□□ -0.59
CCDC43-203ENST00000588210 FBN1P35555 2871 aaKnown RBP11.34□□□□□ -0.59
CCDC43-203ENST00000588210 ATRQ13535 2644 aa11.34□□□□□ -0.59
CCDC43-203ENST00000588210 A0A1B0GW15 77 aa11.34□□□□□ -0.59
CCDC43-203ENST00000588210 OR4C46A6NHA9 309 aa11.34□□□□□ -0.59
CCDC43-203ENST00000588210 RIGQ13278 110 aa11.34□□□□□ -0.59
CCDC43-203ENST00000588210 LY6EQ16553 131 aa11.34□□□□□ -0.59
CCDC43-203ENST00000588210 C17orf77Q96MU5 243 aa11.34□□□□□ -0.59
CCDC43-203ENST00000588210 MDFIQ99750 246 aa11.34□□□□□ -0.59
CCDC43-203ENST00000588210 TRAV30A0A087WSZ9 112 aa11.33□□□□□ -0.6
CCDC43-203ENST00000588210 IL4P05112 153 aa11.33□□□□□ -0.6
CCDC43-203ENST00000588210 Q6AWC8 147 aa11.33□□□□□ -0.6
CCDC43-203ENST00000588210 S100A7AQ86SG5 101 aa11.33□□□□□ -0.6
CCDC43-203ENST00000588210 ZNF414Q96IQ9 312 aa11.33□□□□□ -0.6
CCDC43-203ENST00000588210 ST20Q9HBF5 79 aa11.33□□□□□ -0.6
CCDC43-203ENST00000588210 A6NDX4 124 aa11.32□□□□□ -0.6
CCDC43-203ENST00000588210 PDE6HQ13956 83 aa11.32□□□□□ -0.6
CCDC43-203ENST00000588210 LINC00173Q6ZV60 143 aa11.32□□□□□ -0.6
CCDC43-203ENST00000588210 ARMS2P0C7Q2 107 aa11.32□□□□□ -0.6
CCDC43-203ENST00000588210 FAM106CPP0CH98 169 aa11.32□□□□□ -0.6
CCDC43-203ENST00000588210 IGLV11-55A0A075B6I3 123 aa11.31□□□□□ -0.6
CCDC43-203ENST00000588210 TMEM89A2RUT3 159 aa11.31□□□□□ -0.6
CCDC43-203ENST00000588210 NPIPB5A8MRT5 1133 aa11.31□□□□□ -0.6
CCDC43-203ENST00000588210 PET117Q6UWS5 81 aa11.31□□□□□ -0.6
CCDC43-203ENST00000588210 ORAOV1Q8WV07 137 aa11.31□□□□□ -0.6
CCDC43-203ENST00000588210 TMEM191AQ9H0A3 160 aa11.31□□□□□ -0.6
CCDC43-203ENST00000588210 HINT1P49773 126 aaPredicted RBP11.31□□□□□ -0.6
CCDC43-203ENST00000588210 C5orf64Q2M2E5 130 aa11.31□□□□□ -0.6
CCDC43-203ENST00000588210 SERTM2A0A1B0GWG4 89 aa11.3□□□□□ -0.6
CCDC43-203ENST00000588210 GNG7O60262 68 aa11.3□□□□□ -0.6
CCDC43-203ENST00000588210 FCGR2BP31994 310 aaPredicted RBP11.3□□□□□ -0.6
CCDC43-203ENST00000588210 CRIP1P50238 77 aa11.3□□□□□ -0.6
CCDC43-203ENST00000588210 TMEM219Q86XT9 240 aa11.3□□□□□ -0.6
CCDC43-203ENST00000588210 FANCD2OSQ96PS1 177 aa11.3□□□□□ -0.6
CCDC43-203ENST00000588210 MAP1LC3CQ9BXW4 147 aa11.3□□□□□ -0.6
CCDC43-203ENST00000588210 HSPB8Q9UJY1 196 aa11.3□□□□□ -0.6
CCDC43-203ENST00000588210 NDUFA7O95182 113 aa11.29□□□□□ -0.6
CCDC43-203ENST00000588210 MFAP4P55083 255 aa11.29□□□□□ -0.6
CCDC43-203ENST00000588210 AAMDCQ9H7C9 122 aa11.29□□□□□ -0.6
CCDC43-203ENST00000588210 M0R3E3 92 aa11.29□□□□□ -0.6
CCDC43-203ENST00000588210 EBI3Q14213 229 aa11.29□□□□□ -0.6
CCDC43-203ENST00000588210 HES1Q14469 280 aa11.29□□□□□ -0.6
CCDC43-203ENST00000588210 ZNF493Q6ZR52 646 aa11.29□□□□□ -0.6
CCDC43-203ENST00000588210 F8W735 103 aaPredicted RBP11.28□□□□□ -0.6
CCDC43-203ENST00000588210 CT45A10P0DMU9 189 aa11.28□□□□□ -0.6
CCDC43-203ENST00000588210 ZNF138P52744 262 aa11.28□□□□□ -0.6
CCDC43-203ENST00000588210 FBLN7Q53RD9 439 aa11.28□□□□□ -0.6
CCDC43-203ENST00000588210 ARPC1AQ92747 370 aa11.28□□□□□ -0.6
CCDC43-203ENST00000588210 ASCL2Q99929 193 aa11.28□□□□□ -0.6
CCDC43-203ENST00000588210 NPFFR1Q9GZQ6 430 aa11.28□□□□□ -0.6
CCDC43-203ENST00000588210 PPP1R14DQ9NXH3 145 aa11.28□□□□□ -0.6
CCDC43-203ENST00000588210 TMEM11P17152 192 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 300.8 ms