RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 TVP23CQ96ET8 276 aa8.42□□□□□ -1.06
VMP1-207ENST00000588131 FMC1Q96HJ9 113 aa8.42□□□□□ -1.06
VMP1-207ENST00000588131 NIPSNAP3BQ9BS92 247 aa8.42□□□□□ -1.06
VMP1-207ENST00000588131 AGPAT4-IT1Q9H0P7 198 aa8.42□□□□□ -1.06
VMP1-207ENST00000588131 SDF2L1Q9HCN8 221 aa8.42□□□□□ -1.06
VMP1-207ENST00000588131 AURKAIP1Q9NWT8 199 aaPredicted RBP8.42□□□□□ -1.06
VMP1-207ENST00000588131 RBAKDNA6NC62 111 aa8.41□□□□□ -1.06
VMP1-207ENST00000588131 NPIPB6E9PJ23 425 aa8.41□□□□□ -1.06
VMP1-207ENST00000588131 LTAP01374 205 aa8.41□□□□□ -1.06
VMP1-207ENST00000588131 S100A9P06702 114 aaKnown RBP8.41□□□□□ -1.06
VMP1-207ENST00000588131 GNG4P50150 75 aa8.41□□□□□ -1.06
VMP1-207ENST00000588131 INSL3P51460 131 aa8.41□□□□□ -1.06
VMP1-207ENST00000588131 RPL23P62829 140 aaKnown RBP8.41□□□□□ -1.06
VMP1-207ENST00000588131 HIST1H1AQ02539 215 aaPredicted RBP8.41□□□□□ -1.06
VMP1-207ENST00000588131 BEAN1Q3B7T3 259 aa8.41□□□□□ -1.06
VMP1-207ENST00000588131 ODF3L2Q3SX64 289 aa8.41□□□□□ -1.06
VMP1-207ENST00000588131 C9orf47Q6ZRZ4 202 aa8.41□□□□□ -1.06
VMP1-207ENST00000588131 BAGE2Q86Y30 109 aa8.41□□□□□ -1.06
VMP1-207ENST00000588131 OCC1Q8TAD7 63 aa8.41□□□□□ -1.06
VMP1-207ENST00000588131 MCRIP2Q9BUT9 160 aaKnown RBP8.41□□□□□ -1.06
VMP1-207ENST00000588131 GPR61Q9BZJ8 451 aa8.41□□□□□ -1.06
VMP1-207ENST00000588131 KNCNA6PVL3 124 aa8.4□□□□□ -1.06
VMP1-207ENST00000588131 K7EN84 100 aa8.4□□□□□ -1.06
VMP1-207ENST00000588131 CD7P09564 240 aa8.4□□□□□ -1.06
VMP1-207ENST00000588131 ADIRFQ15847 76 aa8.4□□□□□ -1.06
VMP1-207ENST00000588131 LINC01551Q86U37 167 aa8.4□□□□□ -1.06
VMP1-207ENST00000588131 OR10J6PQ8NGY7 276 aa8.4□□□□□ -1.06
VMP1-207ENST00000588131 SAV1Q9H4B6 383 aaPredicted RBP8.4□□□□□ -1.06
VMP1-207ENST00000588131 A0A0J9YX75 114 aa8.39□□□□□ -1.07
VMP1-207ENST00000588131 FBLL1A6NHQ2 334 aaKnown RBP8.39□□□□□ -1.07
VMP1-207ENST00000588131 M0R036 132 aa8.39□□□□□ -1.07
VMP1-207ENST00000588131 CT45A10P0DMU9 189 aa8.39□□□□□ -1.07
VMP1-207ENST00000588131 OR5I1Q13606 314 aa8.39□□□□□ -1.07
VMP1-207ENST00000588131 TMEM78Q5T7P6 136 aa8.39□□□□□ -1.07
VMP1-207ENST00000588131 ATRAIDQ6UW56 229 aa8.39□□□□□ -1.07
VMP1-207ENST00000588131 FOXI2Q6ZQN5 318 aa8.39□□□□□ -1.07
VMP1-207ENST00000588131 APRG1Q8IVJ8 170 aa8.39□□□□□ -1.07
VMP1-207ENST00000588131 C8orf49Q96NF6 230 aa8.39□□□□□ -1.07
VMP1-207ENST00000588131 MLST8Q9BVC4 326 aa8.39□□□□□ -1.07
VMP1-207ENST00000588131 ZNF492Q9P255 531 aa8.39□□□□□ -1.07
VMP1-207ENST00000588131 LY96Q9Y6Y9 160 aa8.39□□□□□ -1.07
VMP1-207ENST00000588131 WIPF1O43516 503 aa8.38□□□□□ -1.07
VMP1-207ENST00000588131 MGST1P10620 155 aaKnown RBP8.38□□□□□ -1.07
VMP1-207ENST00000588131 ZNF138P52744 262 aa8.38□□□□□ -1.07
VMP1-207ENST00000588131 PNRC1Q12796 327 aaPredicted RBP8.38□□□□□ -1.07
VMP1-207ENST00000588131 EBLN2Q6P2I7 272 aa8.38□□□□□ -1.07
VMP1-207ENST00000588131 TMEM183AQ8IXX5 376 aa8.38□□□□□ -1.07
VMP1-207ENST00000588131 SVBPQ8N300 66 aa8.38□□□□□ -1.07
VMP1-207ENST00000588131 CLRN3Q8NCR9 226 aa8.38□□□□□ -1.07
VMP1-207ENST00000588131 ISOC2Q96AB3 205 aa8.38□□□□□ -1.07
VMP1-207ENST00000588131 PRR25Q96S07 402 aa8.38□□□□□ -1.07
VMP1-207ENST00000588131 WFDC10AQ9H1F0 79 aa8.38□□□□□ -1.07
VMP1-207ENST00000588131 C19orf73Q9NVV2 129 aa8.38□□□□□ -1.07
VMP1-207ENST00000588131 ZFP30Q9Y2G7 519 aa8.38□□□□□ -1.07
VMP1-207ENST00000588131 CMYA5Q8N3K9 4069 aa8.38□□□□□ -1.07
VMP1-207ENST00000588131 OR11H12B2RN74 326 aa8.37□□□□□ -1.07
VMP1-207ENST00000588131 J3QL48 77 aa8.37□□□□□ -1.07
VMP1-207ENST00000588131 SNAPINO95295 136 aa8.37□□□□□ -1.07
VMP1-207ENST00000588131 GCGP01275 180 aa8.37□□□□□ -1.07
VMP1-207ENST00000588131 IGKV3-20P01619 116 aa8.37□□□□□ -1.07
VMP1-207ENST00000588131 SMCPP49901 116 aaPredicted RBP8.37□□□□□ -1.07
VMP1-207ENST00000588131 OXLD1Q5BKU9 147 aa8.37□□□□□ -1.07
VMP1-207ENST00000588131 ACTL10Q5JWF8 245 aa8.37□□□□□ -1.07
VMP1-207ENST00000588131 PRR31Q5SQ13 230 aa8.37□□□□□ -1.07
VMP1-207ENST00000588131 LINC00322Q6ZN03 302 aaPredicted RBP8.37□□□□□ -1.07
VMP1-207ENST00000588131 SMIM12Q96EX1 92 aa8.37□□□□□ -1.07
VMP1-207ENST00000588131 ZC2HC1AQ96GY0 325 aa8.37□□□□□ -1.07
VMP1-207ENST00000588131 FAM19A4Q96LR4 140 aa8.37□□□□□ -1.07
VMP1-207ENST00000588131 LINC00477Q96M19 166 aa8.37□□□□□ -1.07
VMP1-207ENST00000588131 PPP1R14DQ9NXH3 145 aa8.37□□□□□ -1.07
VMP1-207ENST00000588131 ANK2Q01484 3957 aa8.37□□□□□ -1.07
VMP1-207ENST00000588131 C7orf77A4D0Y5 90 aa8.36□□□□□ -1.07
VMP1-207ENST00000588131 RBMY1BA6NDE4 496 aaKnown RBP8.36□□□□□ -1.07
VMP1-207ENST00000588131 RBMY1EA6NEQ0 496 aaKnown RBP8.36□□□□□ -1.07
VMP1-207ENST00000588131 H3BMM0 161 aa8.36□□□□□ -1.07
VMP1-207ENST00000588131 DUSP14O95147 198 aaKnown RBP8.36□□□□□ -1.07
VMP1-207ENST00000588131 RBMY1DP0C7P1 496 aaKnown RBP8.36□□□□□ -1.07
VMP1-207ENST00000588131 HLA-DRB4P13762 266 aa8.36□□□□□ -1.07
VMP1-207ENST00000588131 CRIP1P50238 77 aa8.36□□□□□ -1.07
VMP1-207ENST00000588131 ZNF80P51504 273 aaPredicted RBP8.36□□□□□ -1.07
VMP1-207ENST00000588131 SAPCD1Q5SSQ6 148 aa8.36□□□□□ -1.07
VMP1-207ENST00000588131 PRR9Q5T870 116 aa8.36□□□□□ -1.07
VMP1-207ENST00000588131 PRR27Q6MZM9 219 aa8.36□□□□□ -1.07
VMP1-207ENST00000588131 OR4B1Q8NGF8 309 aa8.36□□□□□ -1.07
VMP1-207ENST00000588131 NDFIP1Q9BT67 221 aa8.36□□□□□ -1.07
VMP1-207ENST00000588131 HLA-DRB4X5D2U9 266 aa8.36□□□□□ -1.07
VMP1-207ENST00000588131 A8MTW9 85 aa8.35□□□□□ -1.07
VMP1-207ENST00000588131 J3KRW8 73 aa8.35□□□□□ -1.07
VMP1-207ENST00000588131 CMC4P56277 68 aaPredicted RBP8.35□□□□□ -1.07
VMP1-207ENST00000588131 KIR3DS1Q14943 382 aa8.35□□□□□ -1.07
VMP1-207ENST00000588131 RNF212Q495C1 297 aa8.35□□□□□ -1.07
VMP1-207ENST00000588131 AMTNQ6UX39 209 aa8.35□□□□□ -1.07
VMP1-207ENST00000588131 COX8CQ7Z4L0 72 aa8.35□□□□□ -1.07
VMP1-207ENST00000588131 ZFAND2AQ8N6M9 145 aa8.35□□□□□ -1.07
VMP1-207ENST00000588131 FAM110AQ9BQ89 295 aa8.35□□□□□ -1.07
VMP1-207ENST00000588131 RNASE7Q9H1E1 156 aaKnown RBP8.35□□□□□ -1.07
VMP1-207ENST00000588131 TRRAPQ9Y4A5 3859 aa8.35□□□□□ -1.07
VMP1-207ENST00000588131 SCO1O75880 301 aa8.34□□□□□ -1.07
VMP1-207ENST00000588131 CRISP2P16562 243 aa8.34□□□□□ -1.07
VMP1-207ENST00000588131 FXYD7P58549 80 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms