RNA–Protein interactions for RNA: ENST00000587228.5

GPATCH8-205, Transcript of G-patch domain containing 8, humanhuman

TSL 1 (best)

Gene GPATCH8, Length 4,713 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH8-205ENST00000587228 DPM2O94777 84 aa7.73□□□□□ -1.17
GPATCH8-205ENST00000587228 ELANEP08246 267 aa7.73□□□□□ -1.17
GPATCH8-205ENST00000587228 IGHV3-16A0A0C4DH30 117 aa7.73□□□□□ -1.17
GPATCH8-205ENST00000587228 F5H768 121 aa7.73□□□□□ -1.17
GPATCH8-205ENST00000587228 HAPLN4Q86UW8 402 aa7.73□□□□□ -1.17
GPATCH8-205ENST00000587228 CHTOPQ9Y3Y2 248 aaKnown RBP7.73□□□□□ -1.17
GPATCH8-205ENST00000587228 LINC00587B1AMM8 73 aa7.73□□□□□ -1.17
GPATCH8-205ENST00000587228 PLP1P60201 277 aa7.73□□□□□ -1.17
GPATCH8-205ENST00000587228 LAGE3Q14657 143 aa7.73□□□□□ -1.17
GPATCH8-205ENST00000587228 TRBV19A0A075B6N1 114 aa7.72□□□□□ -1.17
GPATCH8-205ENST00000587228 K7ERU9 68 aa7.72□□□□□ -1.17
GPATCH8-205ENST00000587228 LHBP01229 141 aa7.72□□□□□ -1.17
GPATCH8-205ENST00000587228 OR5A1Q8NGJ0 315 aa7.72□□□□□ -1.17
GPATCH8-205ENST00000587228 C10orf105Q8TEF2 133 aa7.72□□□□□ -1.17
GPATCH8-205ENST00000587228 CSTL1Q9H114 145 aa7.72□□□□□ -1.17
GPATCH8-205ENST00000587228 CENPVL3A0A0U1RRI6 287 aa7.72□□□□□ -1.17
GPATCH8-205ENST00000587228 IGLC1P0CG04 106 aa7.72□□□□□ -1.17
GPATCH8-205ENST00000587228 PLA2G5P39877 138 aa7.72□□□□□ -1.17
GPATCH8-205ENST00000587228 TRAV13-1A0A0B4J241 112 aa7.71□□□□□ -1.17
GPATCH8-205ENST00000587228 PSCAO43653 123 aa7.71□□□□□ -1.17
GPATCH8-205ENST00000587228 C21orf62-AS1Q17RA5 79 aa7.71□□□□□ -1.17
GPATCH8-205ENST00000587228 Q8NFD4 153 aa7.71□□□□□ -1.17
GPATCH8-205ENST00000587228 CYYR1Q96J86 154 aa7.71□□□□□ -1.17
GPATCH8-205ENST00000587228 TMEM242Q9NWH2 141 aa7.71□□□□□ -1.17
GPATCH8-205ENST00000587228 TRAV2A0A0B4J234 112 aa7.71□□□□□ -1.17
GPATCH8-205ENST00000587228 VCYO14598 125 aa7.71□□□□□ -1.17
GPATCH8-205ENST00000587228 C8orf49Q96NF6 230 aa7.71□□□□□ -1.17
GPATCH8-205ENST00000587228 PARD6GQ9BYG4 376 aaPredicted RBP7.71□□□□□ -1.17
GPATCH8-205ENST00000587228 MS4A6AQ9H2W1 248 aa7.71□□□□□ -1.17
GPATCH8-205ENST00000587228 MED12LQ86YW9 2145 aa7.71□□□□□ -1.17
GPATCH8-205ENST00000587228 DSCAMO60469 2012 aa7.71□□□□□ -1.18
GPATCH8-205ENST00000587228 LINC00158P58513 81 aa7.71□□□□□ -1.18
GPATCH8-205ENST00000587228 FAM90A2PQ658T7 463 aa7.71□□□□□ -1.18
GPATCH8-205ENST00000587228 FNDC4Q9H6D8 234 aaPredicted RBP7.71□□□□□ -1.18
GPATCH8-205ENST00000587228 A0A1B0GW64 132 aa7.71□□□□□ -1.18
GPATCH8-205ENST00000587228 COLCA2A8K830 154 aa7.71□□□□□ -1.18
GPATCH8-205ENST00000587228 DAD1P61803 113 aa7.71□□□□□ -1.18
GPATCH8-205ENST00000587228 SSBP2P81877 361 aaPredicted RBP7.71□□□□□ -1.18
GPATCH8-205ENST00000587228 MRPL27Q9P0M9 148 aaKnown RBP7.71□□□□□ -1.18
GPATCH8-205ENST00000587228 GAGE12BA1L429 117 aa7.7□□□□□ -1.18
GPATCH8-205ENST00000587228 ZNF815PA8K554 130 aa7.7□□□□□ -1.18
GPATCH8-205ENST00000587228 GAGE7O76087 117 aa7.7□□□□□ -1.18
GPATCH8-205ENST00000587228 GAGE12FP0CL80 117 aa7.7□□□□□ -1.18
GPATCH8-205ENST00000587228 GAGE12GP0CL81 117 aa7.7□□□□□ -1.18
GPATCH8-205ENST00000587228 GAGE12IP0CL82 117 aa7.7□□□□□ -1.18
GPATCH8-205ENST00000587228 SCGB1A1P11684 91 aa7.7□□□□□ -1.18
GPATCH8-205ENST00000587228 CKS1BP61024 79 aa7.7□□□□□ -1.18
GPATCH8-205ENST00000587228 MSMPQ1L6U9 139 aa7.7□□□□□ -1.18
GPATCH8-205ENST00000587228 PRRC2AP48634 2157 aaKnown RBP7.7□□□□□ -1.18
GPATCH8-205ENST00000587228 TYMSP04818 313 aa7.7□□□□□ -1.18
GPATCH8-205ENST00000587228 C1orf194Q5T5A4 169 aa7.7□□□□□ -1.18
GPATCH8-205ENST00000587228 OR11H6Q8NGC7 330 aa7.7□□□□□ -1.18
GPATCH8-205ENST00000587228 FN1P02751 2386 aaKnown RBP7.7□□□□□ -1.18
GPATCH8-205ENST00000587228 TMEM213A2RRL7 107 aa7.7□□□□□ -1.18
GPATCH8-205ENST00000587228 GAGE12JA6NER3 117 aa7.7□□□□□ -1.18
GPATCH8-205ENST00000587228 GAGE1Q13065 139 aa7.7□□□□□ -1.18
GPATCH8-205ENST00000587228 GAGE4Q13068 117 aa7.7□□□□□ -1.18
GPATCH8-205ENST00000587228 GAGE5Q13069 117 aa7.7□□□□□ -1.18
GPATCH8-205ENST00000587228 GAGE13Q4V321 117 aa7.7□□□□□ -1.18
GPATCH8-205ENST00000587228 MRAPQ8TCY5 172 aa7.7□□□□□ -1.18
GPATCH8-205ENST00000587228 TMEM190Q8WZ59 177 aa7.7□□□□□ -1.18
GPATCH8-205ENST00000587228 PCNX3Q9H6A9 2034 aa7.7□□□□□ -1.18
GPATCH8-205ENST00000587228 IGLC7A0M8Q6 106 aa7.7□□□□□ -1.18
GPATCH8-205ENST00000587228 IGKCP01834 107 aa7.7□□□□□ -1.18
GPATCH8-205ENST00000587228 HOXD3P31249 432 aaPredicted RBP7.7□□□□□ -1.18
GPATCH8-205ENST00000587228 DAZAP2Q15038 168 aaPredicted RBP7.7□□□□□ -1.18
GPATCH8-205ENST00000587228 TMEM256Q8N2U0 113 aa7.7□□□□□ -1.18
GPATCH8-205ENST00000587228 CHCHD1Q96BP2 118 aaKnown RBP7.7□□□□□ -1.18
GPATCH8-205ENST00000587228 LY96Q9Y6Y9 160 aa7.7□□□□□ -1.18
GPATCH8-205ENST00000587228 GGTLC3B5MD39 225 aa7.69□□□□□ -1.18
GPATCH8-205ENST00000587228 UBE2CO00762 179 aa7.69□□□□□ -1.18
GPATCH8-205ENST00000587228 NHP2Q9NX24 153 aaKnown RBP7.69□□□□□ -1.18
GPATCH8-205ENST00000587228 IGHV7-4-1A0A0J9YVY3 117 aa7.69□□□□□ -1.18
GPATCH8-205ENST00000587228 C9JQL5 133 aa7.69□□□□□ -1.18
GPATCH8-205ENST00000587228 F6UB75 175 aa7.69□□□□□ -1.18
GPATCH8-205ENST00000587228 PFN1P07737 140 aaKnown RBP7.69□□□□□ -1.18
GPATCH8-205ENST00000587228 POU2AF1Q16633 256 aa7.69□□□□□ -1.18
GPATCH8-205ENST00000587228 TEX43Q6ZNM6 134 aa7.69□□□□□ -1.18
GPATCH8-205ENST00000587228 SLC25A2Q9BXI2 301 aa7.69□□□□□ -1.18
GPATCH8-205ENST00000587228 CDKN1BP46527 198 aa7.69□□□□□ -1.18
GPATCH8-205ENST00000587228 ZNF491Q8N8L2 437 aa7.69□□□□□ -1.18
GPATCH8-205ENST00000587228 TMEM158Q8WZ71 300 aa7.69□□□□□ -1.18
GPATCH8-205ENST00000587228 CCL24O00175 119 aa7.69□□□□□ -1.18
GPATCH8-205ENST00000587228 ZFP36P26651 326 aaKnown RBP7.69□□□□□ -1.18
GPATCH8-205ENST00000587228 NPC2P61916 151 aa7.69□□□□□ -1.18
GPATCH8-205ENST00000587228 RBMY1BA6NDE4 496 aaKnown RBP7.68□□□□□ -1.18
GPATCH8-205ENST00000587228 RBMY1EA6NEQ0 496 aaKnown RBP7.68□□□□□ -1.18
GPATCH8-205ENST00000587228 RBMY1DP0C7P1 496 aaKnown RBP7.68□□□□□ -1.18
GPATCH8-205ENST00000587228 RBMY1A1P0DJD3 496 aaKnown RBP7.68□□□□□ -1.18
GPATCH8-205ENST00000587228 RBMY1CP0DJD4 496 aa7.68□□□□□ -1.18
GPATCH8-205ENST00000587228 PLNP26678 52 aa7.68□□□□□ -1.18
GPATCH8-205ENST00000587228 HIST1H2BLQ99880 126 aa7.68□□□□□ -1.18
GPATCH8-205ENST00000587228 IGHV1OR15-1A0A075B7D0 117 aa7.68□□□□□ -1.18
GPATCH8-205ENST00000587228 TRAV9-2A0A087WT02 112 aa7.68□□□□□ -1.18
GPATCH8-205ENST00000587228 H3BRN7 92 aa7.68□□□□□ -1.18
GPATCH8-205ENST00000587228 HLA-DMBP28068 263 aa7.68□□□□□ -1.18
GPATCH8-205ENST00000587228 PRR25Q96S07 402 aa7.68□□□□□ -1.18
GPATCH8-205ENST00000587228 DENND4AQ7Z401 1863 aa7.68□□□□□ -1.18
GPATCH8-205ENST00000587228 C6orf226Q5I0X4 101 aa7.68□□□□□ -1.18
GPATCH8-205ENST00000587228 RITA1Q96K30 269 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms