RNA–Protein interactions for RNA: ENST00000587170.1

CXXC1-208, Transcript of CXXC finger protein 1, humanhuman

TSL 2

Gene CXXC1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-208ENST00000587170 MCFD2Q8NI22 146 aa9.52□□□□□ -0.89
CXXC1-208ENST00000587170 RCL1Q9Y2P8 373 aaKnown RBP9.52□□□□□ -0.89
CXXC1-208ENST00000587170 V9GYH0 126 aa9.52□□□□□ -0.89
CXXC1-208ENST00000587170 J3QL48 77 aa9.51□□□□□ -0.89
CXXC1-208ENST00000587170 HAMPP81172 84 aa9.51□□□□□ -0.89
CXXC1-208ENST00000587170 MRPS26Q9BYN8 205 aaKnown RBP9.51□□□□□ -0.89
CXXC1-208ENST00000587170 HHLA3Q9XRX5 114 aa9.51□□□□□ -0.89
CXXC1-208ENST00000587170 FAT3Q8TDW7 4589 aa9.51□□□□□ -0.89
CXXC1-208ENST00000587170 LRCOL1A6NCL2 159 aa9.5□□□□□ -0.89
CXXC1-208ENST00000587170 KRTAP29-1A8MX34 341 aaPredicted RBP9.5□□□□□ -0.89
CXXC1-208ENST00000587170 M0R3E3 92 aa9.5□□□□□ -0.89
CXXC1-208ENST00000587170 MPDU1O75352 247 aa9.5□□□□□ -0.89
CXXC1-208ENST00000587170 EVI2AP22794 236 aa9.5□□□□□ -0.89
CXXC1-208ENST00000587170 TMBIM6P55061 237 aa9.5□□□□□ -0.89
CXXC1-208ENST00000587170 IQCF2Q8IXL9 164 aa9.5□□□□□ -0.89
CXXC1-208ENST00000587170 LINC00477Q96M19 166 aa9.5□□□□□ -0.89
CXXC1-208ENST00000587170 C8orf49Q96NF6 230 aa9.5□□□□□ -0.89
CXXC1-208ENST00000587170 DNAJC4Q9NNZ3 241 aa9.5□□□□□ -0.89
CXXC1-208ENST00000587170 MRPL16Q9NX20 251 aaKnown RBP9.5□□□□□ -0.89
CXXC1-208ENST00000587170 TRBV19A0A075B6N1 114 aa9.49□□□□□ -0.89
CXXC1-208ENST00000587170 IGLV5-52A0A0A0MRZ9 124 aa9.49□□□□□ -0.89
CXXC1-208ENST00000587170 K7EQD1 137 aa9.49□□□□□ -0.89
CXXC1-208ENST00000587170 NDUFB4O95168 129 aa9.49□□□□□ -0.89
CXXC1-208ENST00000587170 IGHV3-53P01767 116 aa9.49□□□□□ -0.89
CXXC1-208ENST00000587170 C1QBP02746 253 aa9.49□□□□□ -0.89
CXXC1-208ENST00000587170 PDE6HQ13956 83 aa9.49□□□□□ -0.89
CXXC1-208ENST00000587170 PRR9Q5T870 116 aa9.49□□□□□ -0.89
CXXC1-208ENST00000587170 C9orf47Q6ZRZ4 202 aa9.49□□□□□ -0.89
CXXC1-208ENST00000587170 C10orf126Q8N4M7 172 aa9.49□□□□□ -0.89
CXXC1-208ENST00000587170 ZFAND2AQ8N6M9 145 aa9.49□□□□□ -0.89
CXXC1-208ENST00000587170 MRPL32Q9BYC8 188 aaKnown RBP9.49□□□□□ -0.89
CXXC1-208ENST00000587170 AGPAT4-IT1Q9H0P7 198 aa9.49□□□□□ -0.89
CXXC1-208ENST00000587170 TP53TG3Q9ULZ0 132 aa9.49□□□□□ -0.89
CXXC1-208ENST00000587170 PRELID1Q9Y255 219 aa9.49□□□□□ -0.89
CXXC1-208ENST00000587170 TRAV5A0A0B4J249 113 aa9.48□□□□□ -0.89
CXXC1-208ENST00000587170 C7orf66A4D0T2 115 aa9.48□□□□□ -0.89
CXXC1-208ENST00000587170 PRAF2O60831 178 aa9.48□□□□□ -0.89
CXXC1-208ENST00000587170 CAMLGP49069 296 aa9.48□□□□□ -0.89
CXXC1-208ENST00000587170 ERCC8Q13216 396 aa9.48□□□□□ -0.89
CXXC1-208ENST00000587170 PFDN5Q99471 154 aa9.48□□□□□ -0.89
CXXC1-208ENST00000587170 TMEM14CQ9P0S9 112 aa9.48□□□□□ -0.89
CXXC1-208ENST00000587170 PKHD1L1Q86WI1 4243 aa9.47□□□□□ -0.89
CXXC1-208ENST00000587170 IGHV1OR15-1A0A075B7D0 117 aa9.47□□□□□ -0.89
CXXC1-208ENST00000587170 H3BMQ9 156 aa9.47□□□□□ -0.89
CXXC1-208ENST00000587170 NDUFB6O95139 128 aa9.47□□□□□ -0.89
CXXC1-208ENST00000587170 GPX1P07203 203 aa9.47□□□□□ -0.89
CXXC1-208ENST00000587170 CRYGDP07320 174 aa9.47□□□□□ -0.89
CXXC1-208ENST00000587170 SRIP30626 198 aa9.47□□□□□ -0.89
CXXC1-208ENST00000587170 RNASE4P34096 147 aaKnown RBP9.47□□□□□ -0.89
CXXC1-208ENST00000587170 IAH1Q2TAA2 248 aaPredicted RBP9.47□□□□□ -0.89
CXXC1-208ENST00000587170 PYDC2Q56P42 97 aa9.47□□□□□ -0.89
CXXC1-208ENST00000587170 Q6ZRG5 221 aa9.47□□□□□ -0.89
CXXC1-208ENST00000587170 Q6ZSA8 131 aa9.47□□□□□ -0.89
CXXC1-208ENST00000587170 OR10G4Q8NGN3 311 aa9.47□□□□□ -0.89
CXXC1-208ENST00000587170 OR1L4Q8NGR5 311 aa9.47□□□□□ -0.89
CXXC1-208ENST00000587170 TRBV7-9A0A0J9YWB2 115 aa9.46□□□□□ -0.9
CXXC1-208ENST00000587170 ORM1P02763 201 aa9.46□□□□□ -0.9
CXXC1-208ENST00000587170 TIRAPP58753 221 aa9.46□□□□□ -0.9
CXXC1-208ENST00000587170 ZNF415Q09FC8 603 aa9.46□□□□□ -0.9
CXXC1-208ENST00000587170 VWC2Q2TAL6 325 aa9.46□□□□□ -0.9
CXXC1-208ENST00000587170 MIC13Q5XKP0 118 aa9.46□□□□□ -0.9
CXXC1-208ENST00000587170 Q6ZQT7 251 aa9.46□□□□□ -0.9
CXXC1-208ENST00000587170 NRARPQ7Z6K4 114 aa9.46□□□□□ -0.9
CXXC1-208ENST00000587170 FAM30AQ9NZY2 134 aa9.46□□□□□ -0.9
CXXC1-208ENST00000587170 WDR83OSQ9Y284 106 aa9.46□□□□□ -0.9
CXXC1-208ENST00000587170 RGS13O14921 159 aa9.45□□□□□ -0.9
CXXC1-208ENST00000587170 SCGB1D2O95969 90 aa9.45□□□□□ -0.9
CXXC1-208ENST00000587170 MBPP02686 304 aaPredicted RBP9.45□□□□□ -0.9
CXXC1-208ENST00000587170 HIST1H1EP10412 219 aaKnown RBP9.45□□□□□ -0.9
CXXC1-208ENST00000587170 RPL29P47914 159 aaKnown RBP9.45□□□□□ -0.9
CXXC1-208ENST00000587170 RAB31Q13636 194 aa9.45□□□□□ -0.9
CXXC1-208ENST00000587170 Q8N814 137 aa9.45□□□□□ -0.9
CXXC1-208ENST00000587170 CHAC2Q8WUX2 184 aa9.45□□□□□ -0.9
CXXC1-208ENST00000587170 ARPC5LQ9BPX5 153 aa9.45□□□□□ -0.9
CXXC1-208ENST00000587170 TRGV4A0A0C4DH28 118 aa9.44□□□□□ -0.9
CXXC1-208ENST00000587170 PLA2G1BP04054 148 aaKnown RBP9.44□□□□□ -0.9
CXXC1-208ENST00000587170 GYPEP15421 78 aa9.44□□□□□ -0.9
CXXC1-208ENST00000587170 LINC01556Q5JQF7 62 aa9.44□□□□□ -0.9
CXXC1-208ENST00000587170 C12orf45Q8N5I9 185 aaPredicted RBP9.44□□□□□ -0.9
CXXC1-208ENST00000587170 PCNPQ8WW12 178 aaKnown RBP9.44□□□□□ -0.9
CXXC1-208ENST00000587170 RASL10AQ92737 203 aa9.44□□□□□ -0.9
CXXC1-208ENST00000587170 ZNF479Q96JC4 524 aa9.44□□□□□ -0.9
CXXC1-208ENST00000587170 TXNDC17Q9BRA2 123 aa9.44□□□□□ -0.9
CXXC1-208ENST00000587170 SRRQ9GZT4 340 aa9.44□□□□□ -0.9
CXXC1-208ENST00000587170 C11orf1Q9H5F2 150 aa9.44□□□□□ -0.9
CXXC1-208ENST00000587170 SLC39A9Q9NUM3 307 aa9.44□□□□□ -0.9
CXXC1-208ENST00000587170 ZNF492Q9P255 531 aa9.44□□□□□ -0.9
CXXC1-208ENST00000587170 IGKV2-40A0A087WW87 121 aaPredicted RBP9.43□□□□□ -0.9
CXXC1-208ENST00000587170 C9JCJ5 164 aa9.43□□□□□ -0.9
CXXC1-208ENST00000587170 E5RGE8 158 aa9.43□□□□□ -0.9
CXXC1-208ENST00000587170 IGKV2D-40P01614 121 aaPredicted RBP9.43□□□□□ -0.9
CXXC1-208ENST00000587170 SFTA3P0C7M3 94 aa9.43□□□□□ -0.9
CXXC1-208ENST00000587170 TMEM78Q5T7P6 136 aa9.43□□□□□ -0.9
CXXC1-208ENST00000587170 EXOC3-AS1Q8N2X6 119 aa9.43□□□□□ -0.9
CXXC1-208ENST00000587170 MITD1Q8WV92 249 aa9.43□□□□□ -0.9
CXXC1-208ENST00000587170 UQCC1Q9NVA1 299 aa9.43□□□□□ -0.9
CXXC1-208ENST00000587170 FLVCR2Q9UPI3 526 aa9.43□□□□□ -0.9
CXXC1-208ENST00000587170 NAP1L6A6NFF2 107 aa9.42□□□□□ -0.9
CXXC1-208ENST00000587170 IBA57-AS1B1ANH7 110 aa9.42□□□□□ -0.9
CXXC1-208ENST00000587170 PSCAO43653 123 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms