RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 PAX4O43316 350 aa9.85□□□□□ -0.83
SDF2-202ENST00000585428 NXPH4O95158 308 aa9.85□□□□□ -0.83
SDF2-202ENST00000585428 NMBP08949 121 aa9.85□□□□□ -0.83
SDF2-202ENST00000585428 CRISP2P16562 243 aa9.85□□□□□ -0.83
SDF2-202ENST00000585428 RNASE4P34096 147 aaKnown RBP9.85□□□□□ -0.83
SDF2-202ENST00000585428 RPL29P47914 159 aaKnown RBP9.85□□□□□ -0.83
SDF2-202ENST00000585428 TCL1AP56279 114 aa9.85□□□□□ -0.83
SDF2-202ENST00000585428 VWC2Q2TAL6 325 aa9.85□□□□□ -0.83
SDF2-202ENST00000585428 SPANXN2Q5MJ10 180 aa9.85□□□□□ -0.83
SDF2-202ENST00000585428 OR1L4Q8NGR5 311 aa9.85□□□□□ -0.83
SDF2-202ENST00000585428 ST6GAL2Q96JF0 529 aa9.85□□□□□ -0.83
SDF2-202ENST00000585428 SDHCQ99643 169 aaPredicted RBP9.85□□□□□ -0.83
SDF2-202ENST00000585428 TMEM14CQ9P0S9 112 aa9.85□□□□□ -0.83
SDF2-202ENST00000585428 EREGO14944 169 aa9.84□□□□□ -0.83
SDF2-202ENST00000585428 MPDU1O75352 247 aa9.84□□□□□ -0.83
SDF2-202ENST00000585428 SLAQ13239 276 aa9.84□□□□□ -0.83
SDF2-202ENST00000585428 BTN1A1Q13410 526 aa9.84□□□□□ -0.83
SDF2-202ENST00000585428 FHL2Q14192 279 aa9.84□□□□□ -0.83
SDF2-202ENST00000585428 IBA57Q5T440 356 aaKnown RBP9.84□□□□□ -0.83
SDF2-202ENST00000585428 C9orf47Q6ZRZ4 202 aa9.84□□□□□ -0.83
SDF2-202ENST00000585428 C12orf45Q8N5I9 185 aaPredicted RBP9.84□□□□□ -0.83
SDF2-202ENST00000585428 PFDN5Q99471 154 aa9.84□□□□□ -0.83
SDF2-202ENST00000585428 C20orf85Q9H1P6 137 aa9.84□□□□□ -0.83
SDF2-202ENST00000585428 SLC39A9Q9NUM3 307 aa9.84□□□□□ -0.83
SDF2-202ENST00000585428 PRO0255Q9UI72 69 aa9.84□□□□□ -0.83
SDF2-202ENST00000585428 TP53TG3Q9ULZ0 132 aa9.84□□□□□ -0.83
SDF2-202ENST00000585428 HHLA3Q9XRX5 114 aa9.84□□□□□ -0.83
SDF2-202ENST00000585428 PRELID1Q9Y255 219 aa9.84□□□□□ -0.83
SDF2-202ENST00000585428 ICOSQ9Y6W8 199 aa9.84□□□□□ -0.83
SDF2-202ENST00000585428 FAM24AA6NFZ4 105 aa9.83□□□□□ -0.84
SDF2-202ENST00000585428 L7N2F9 121 aa9.83□□□□□ -0.84
SDF2-202ENST00000585428 CST7O76096 145 aa9.83□□□□□ -0.84
SDF2-202ENST00000585428 HIST1H1EP10412 219 aaKnown RBP9.83□□□□□ -0.84
SDF2-202ENST00000585428 INPP1P49441 399 aa9.83□□□□□ -0.84
SDF2-202ENST00000585428 CRYBA4P53673 196 aa9.83□□□□□ -0.84
SDF2-202ENST00000585428 KRTAP10-1P60331 282 aa9.83□□□□□ -0.84
SDF2-202ENST00000585428 ERVFC1-1P60608 527 aa9.83□□□□□ -0.84
SDF2-202ENST00000585428 VAMP2P63027 116 aa9.83□□□□□ -0.84
SDF2-202ENST00000585428 CNPY1Q3B7I2 92 aa9.83□□□□□ -0.84
SDF2-202ENST00000585428 Q6ZQT7 251 aa9.83□□□□□ -0.84
SDF2-202ENST00000585428 NFE4Q86UQ8 179 aa9.83□□□□□ -0.84
SDF2-202ENST00000585428 ZFAND2AQ8N6M9 145 aa9.83□□□□□ -0.84
SDF2-202ENST00000585428 UQCC1Q9NVA1 299 aa9.83□□□□□ -0.84
SDF2-202ENST00000585428 PTTG2Q9NZH5 202 aa9.83□□□□□ -0.84
SDF2-202ENST00000585428 A0A087WTM6 91 aa9.82□□□□□ -0.84
SDF2-202ENST00000585428 A6NHS1 94 aa9.82□□□□□ -0.84
SDF2-202ENST00000585428 CENPXA8MT69 81 aa9.82□□□□□ -0.84
SDF2-202ENST00000585428 PRAF2O60831 178 aa9.82□□□□□ -0.84
SDF2-202ENST00000585428 GPX1P07203 203 aa9.82□□□□□ -0.84
SDF2-202ENST00000585428 BCAP31P51572 246 aa9.82□□□□□ -0.84
SDF2-202ENST00000585428 PDE6HQ13956 83 aa9.82□□□□□ -0.84
SDF2-202ENST00000585428 MRPL23Q16540 153 aaKnown RBP9.82□□□□□ -0.84
SDF2-202ENST00000585428 TRIQKQ629K1 86 aa9.82□□□□□ -0.84
SDF2-202ENST00000585428 EXOC3-AS1Q8N2X6 119 aa9.82□□□□□ -0.84
SDF2-202ENST00000585428 MRPL32Q9BYC8 188 aaKnown RBP9.82□□□□□ -0.84
SDF2-202ENST00000585428 TIMM9Q9Y5J7 89 aa9.82□□□□□ -0.84
SDF2-202ENST00000585428 TRAV9-2A0A087WT02 112 aa9.81□□□□□ -0.84
SDF2-202ENST00000585428 K7EP13 123 aa9.81□□□□□ -0.84
SDF2-202ENST00000585428 CCSO14618 274 aa9.81□□□□□ -0.84
SDF2-202ENST00000585428 S100A11P31949 105 aa9.81□□□□□ -0.84
SDF2-202ENST00000585428 CAV2P51636 162 aa9.81□□□□□ -0.84
SDF2-202ENST00000585428 IL15RAQ13261 267 aa9.81□□□□□ -0.84
SDF2-202ENST00000585428 Q5VSD8 79 aa9.81□□□□□ -0.84
SDF2-202ENST00000585428 NEGR1Q7Z3B1 354 aa9.81□□□□□ -0.84
SDF2-202ENST00000585428 IQCF2Q8IXL9 164 aa9.81□□□□□ -0.84
SDF2-202ENST00000585428 VGLL1Q99990 258 aa9.81□□□□□ -0.84
SDF2-202ENST00000585428 LSM5Q9Y4Y9 91 aaKnown RBP9.81□□□□□ -0.84
SDF2-202ENST00000585428 IGHV1OR15-1A0A075B7D0 117 aa9.8□□□□□ -0.84
SDF2-202ENST00000585428 IFNA5P01569 189 aa9.8□□□□□ -0.84
SDF2-202ENST00000585428 IGHV3-53P01767 116 aa9.8□□□□□ -0.84
SDF2-202ENST00000585428 DNAH10OSP0CZ25 163 aa9.8□□□□□ -0.84
SDF2-202ENST00000585428 PYYP10082 97 aa9.8□□□□□ -0.84
SDF2-202ENST00000585428 SULT1A1P50225 295 aa9.8□□□□□ -0.84
SDF2-202ENST00000585428 ZNF846Q147U1 533 aa9.8□□□□□ -0.84
SDF2-202ENST00000585428 PRR9Q5T870 116 aa9.8□□□□□ -0.84
SDF2-202ENST00000585428 C8orf49Q96NF6 230 aa9.8□□□□□ -0.84
SDF2-202ENST00000585428 RBM38Q9H0Z9 239 aaKnown RBP9.8□□□□□ -0.84
SDF2-202ENST00000585428 MRPL16Q9NX20 251 aaKnown RBP9.8□□□□□ -0.84
SDF2-202ENST00000585428 ZNF492Q9P255 531 aa9.8□□□□□ -0.84
SDF2-202ENST00000585428 CCDC160A6NGH7 325 aa9.79□□□□□ -0.84
SDF2-202ENST00000585428 RGS13O14921 159 aa9.79□□□□□ -0.84
SDF2-202ENST00000585428 PLA2G10O15496 165 aa9.79□□□□□ -0.84
SDF2-202ENST00000585428 ICAM4Q14773 271 aa9.79□□□□□ -0.84
SDF2-202ENST00000585428 TMEM252Q8N6L7 170 aa9.79□□□□□ -0.84
SDF2-202ENST00000585428 BLNKQ8WV28 456 aa9.79□□□□□ -0.84
SDF2-202ENST00000585428 FRZBQ92765 325 aa9.79□□□□□ -0.84
SDF2-202ENST00000585428 C2orf50Q96LR7 162 aa9.79□□□□□ -0.84
SDF2-202ENST00000585428 LYRM2Q9NU23 88 aaPredicted RBP9.79□□□□□ -0.84
SDF2-202ENST00000585428 LY96Q9Y6Y9 160 aa9.79□□□□□ -0.84
SDF2-202ENST00000585428 VPS13BQ7Z7G8 4022 aa9.78□□□□□ -0.84
SDF2-202ENST00000585428 IGKV2-40A0A087WW87 121 aaPredicted RBP9.78□□□□□ -0.84
SDF2-202ENST00000585428 TRBV7-9A0A0J9YWB2 115 aa9.78□□□□□ -0.84
SDF2-202ENST00000585428 IGSF23A1L1A6 192 aa9.78□□□□□ -0.84
SDF2-202ENST00000585428 FAM25EA8MYX2 175 aa9.78□□□□□ -0.84
SDF2-202ENST00000585428 K7EQD1 137 aa9.78□□□□□ -0.84
SDF2-202ENST00000585428 IGKV2D-40P01614 121 aaPredicted RBP9.78□□□□□ -0.84
SDF2-202ENST00000585428 IL7P13232 177 aa9.78□□□□□ -0.84
SDF2-202ENST00000585428 ATP6V1FQ16864 119 aa9.78□□□□□ -0.84
SDF2-202ENST00000585428 TMEM78Q5T7P6 136 aa9.78□□□□□ -0.84
SDF2-202ENST00000585428 FAM167A-AS1Q96KT0 104 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms