RNA–Protein interactions for RNA: ENST00000585333.1

TRIM47-202, Transcript of tripartite motif containing 47, humanhuman

TSL 3

Gene TRIM47, Length 595 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-202ENST00000585333 IGKV2-40A0A087WW87 121 aaPredicted RBP9.6□□□□□ -0.87
TRIM47-202ENST00000585333 A8MTW9 85 aa9.6□□□□□ -0.87
TRIM47-202ENST00000585333 C9JCJ5 164 aa9.6□□□□□ -0.87
TRIM47-202ENST00000585333 H3BMM0 161 aa9.6□□□□□ -0.87
TRIM47-202ENST00000585333 IGKV2D-40P01614 121 aaPredicted RBP9.6□□□□□ -0.87
TRIM47-202ENST00000585333 SRP19P09132 144 aaKnown RBP9.6□□□□□ -0.87
TRIM47-202ENST00000585333 CT45A10P0DMU9 189 aa9.6□□□□□ -0.87
TRIM47-202ENST00000585333 HLA-DMBP28068 263 aa9.6□□□□□ -0.87
TRIM47-202ENST00000585333 RPL35P42766 123 aaKnown RBP9.6□□□□□ -0.87
TRIM47-202ENST00000585333 GNG4P50150 75 aa9.6□□□□□ -0.87
TRIM47-202ENST00000585333 APOC4P55056 127 aa9.6□□□□□ -0.87
TRIM47-202ENST00000585333 GNG5P63218 68 aa9.6□□□□□ -0.87
TRIM47-202ENST00000585333 OR4B1Q8NGF8 309 aa9.6□□□□□ -0.87
TRIM47-202ENST00000585333 SMIM7Q9BQ49 75 aa9.6□□□□□ -0.87
TRIM47-202ENST00000585333 ZNF492Q9P255 531 aa9.6□□□□□ -0.87
TRIM47-202ENST00000585333 PSG8Q9UQ74 426 aa9.6□□□□□ -0.87
TRIM47-202ENST00000585333 LY96Q9Y6Y9 160 aa9.6□□□□□ -0.87
TRIM47-202ENST00000585333 KIR2DL5BA0A0G2JN68 375 aa9.59□□□□□ -0.87
TRIM47-202ENST00000585333 KIR2DL5BA0A0G2JPC4 375 aa9.59□□□□□ -0.87
TRIM47-202ENST00000585333 ZNF727A8MUV8 499 aa9.59□□□□□ -0.87
TRIM47-202ENST00000585333 A8MZ25 164 aa9.59□□□□□ -0.87
TRIM47-202ENST00000585333 CEBPGP53567 150 aa9.59□□□□□ -0.87
TRIM47-202ENST00000585333 APRG1Q8IVJ8 170 aa9.59□□□□□ -0.87
TRIM47-202ENST00000585333 KIR2DL5AQ8N109 375 aa9.59□□□□□ -0.87
TRIM47-202ENST00000585333 KIR2DL5BQ8NHK3 375 aa9.59□□□□□ -0.87
TRIM47-202ENST00000585333 NIPSNAP3BQ9BS92 247 aa9.59□□□□□ -0.87
TRIM47-202ENST00000585333 PARLQ9H300 379 aa9.59□□□□□ -0.87
TRIM47-202ENST00000585333 SRD5A3Q9H8P0 318 aa9.59□□□□□ -0.87
TRIM47-202ENST00000585333 C19orf73Q9NVV2 129 aa9.59□□□□□ -0.87
TRIM47-202ENST00000585333 PKD1L1Q8TDX9 2849 aa9.59□□□□□ -0.87
TRIM47-202ENST00000585333 MGAM2Q2M2H8 2515 aa9.58□□□□□ -0.88
TRIM47-202ENST00000585333 LOC102724200A0A096LPH7 203 aaPredicted RBP9.58□□□□□ -0.88
TRIM47-202ENST00000585333 UBE2CO00762 179 aa9.58□□□□□ -0.88
TRIM47-202ENST00000585333 CDKN1BP46527 198 aa9.58□□□□□ -0.88
TRIM47-202ENST00000585333 PRNTQ86SH4 94 aa9.58□□□□□ -0.88
TRIM47-202ENST00000585333 Q86TA4 180 aa9.58□□□□□ -0.88
TRIM47-202ENST00000585333 TRPT1Q86TN4 253 aaKnown RBP9.58□□□□□ -0.88
TRIM47-202ENST00000585333 BAGE2Q86Y30 109 aa9.58□□□□□ -0.88
TRIM47-202ENST00000585333 PRR25Q96S07 402 aa9.58□□□□□ -0.88
TRIM47-202ENST00000585333 C20orf144Q9BQM9 153 aa9.58□□□□□ -0.88
TRIM47-202ENST00000585333 AGPAT4-IT1Q9H0P7 198 aa9.58□□□□□ -0.88
TRIM47-202ENST00000585333 TRRAPQ9Y4A5 3859 aa9.57□□□□□ -0.88
TRIM47-202ENST00000585333 KNCNA6PVL3 124 aa9.57□□□□□ -0.88
TRIM47-202ENST00000585333 KRBOX1C9JBD0 128 aa9.57□□□□□ -0.88
TRIM47-202ENST00000585333 PRAC2D3DTV9 90 aa9.57□□□□□ -0.88
TRIM47-202ENST00000585333 LTAP01374 205 aa9.57□□□□□ -0.88
TRIM47-202ENST00000585333 SFTA3P0C7M3 94 aa9.57□□□□□ -0.88
TRIM47-202ENST00000585333 CRISP2P16562 243 aa9.57□□□□□ -0.88
TRIM47-202ENST00000585333 PNRC1Q12796 327 aaPredicted RBP9.57□□□□□ -0.88
TRIM47-202ENST00000585333 ZNF674Q2M3X9 581 aa9.57□□□□□ -0.88
TRIM47-202ENST00000585333 SMUG1Q53HV7 270 aa9.57□□□□□ -0.88
TRIM47-202ENST00000585333 TMEM183AQ8IXX5 376 aa9.57□□□□□ -0.88
TRIM47-202ENST00000585333 Q8N1Y9 231 aa9.57□□□□□ -0.88
TRIM47-202ENST00000585333 VGLL1Q99990 258 aa9.57□□□□□ -0.88
TRIM47-202ENST00000585333 TMEM218A2RU14 115 aa9.56□□□□□ -0.88
TRIM47-202ENST00000585333 F6UB75 175 aa9.56□□□□□ -0.88
TRIM47-202ENST00000585333 GPX1P07203 203 aa9.56□□□□□ -0.88
TRIM47-202ENST00000585333 KRTAP10-11P60412 298 aa9.56□□□□□ -0.88
TRIM47-202ENST00000585333 TMEM241Q24JQ0 296 aa9.56□□□□□ -0.88
TRIM47-202ENST00000585333 CENPWQ5EE01 88 aa9.56□□□□□ -0.88
TRIM47-202ENST00000585333 COX8CQ7Z4L0 72 aa9.56□□□□□ -0.88
TRIM47-202ENST00000585333 DEFB125Q8N687 156 aa9.56□□□□□ -0.88
TRIM47-202ENST00000585333 ASCL2Q99929 193 aa9.56□□□□□ -0.88
TRIM47-202ENST00000585333 SEC11CQ9BY50 192 aa9.56□□□□□ -0.88
TRIM47-202ENST00000585333 NAT8Q9UHE5 227 aa9.56□□□□□ -0.88
TRIM47-202ENST00000585333 VWFP04275 2813 aa9.55□□□□□ -0.88
TRIM47-202ENST00000585333 TRAV8-1A0A0A6YYK1 113 aa9.55□□□□□ -0.88
TRIM47-202ENST00000585333 F8W036 122 aa9.55□□□□□ -0.88
TRIM47-202ENST00000585333 INSP01308 110 aa9.55□□□□□ -0.88
TRIM47-202ENST00000585333 IGLV2-11P01706 119 aa9.55□□□□□ -0.88
TRIM47-202ENST00000585333 ERCC8Q13216 396 aa9.55□□□□□ -0.88
TRIM47-202ENST00000585333 TMEM256Q8N2U0 113 aa9.55□□□□□ -0.88
TRIM47-202ENST00000585333 CSTL1Q9H114 145 aa9.55□□□□□ -0.88
TRIM47-202ENST00000585333 TRAV34A0A0B4J273 112 aa9.54□□□□□ -0.88
TRIM47-202ENST00000585333 TRAV21A0A0B4J279 112 aa9.54□□□□□ -0.88
TRIM47-202ENST00000585333 IGHV4-30-4P0DP06 118 aa9.54□□□□□ -0.88
TRIM47-202ENST00000585333 SRSF3P84103 164 aaKnown RBP9.54□□□□□ -0.88
TRIM47-202ENST00000585333 GDF5OSQ5U4N7 250 aa9.54□□□□□ -0.88
TRIM47-202ENST00000585333 DAZAP1Q96EP5 407 aaKnown RBP9.54□□□□□ -0.88
TRIM47-202ENST00000585333 FAM19A4Q96LR4 140 aa9.54□□□□□ -0.88
TRIM47-202ENST00000585333 IGF2BP2-AS1Q96M15 143 aa9.54□□□□□ -0.88
TRIM47-202ENST00000585333 CITED4Q96RK1 184 aa9.54□□□□□ -0.88
TRIM47-202ENST00000585333 GOLT1BQ9Y3E0 138 aa9.54□□□□□ -0.88
TRIM47-202ENST00000585333 FABP5P3A8MUU1 101 aa9.53□□□□□ -0.88
TRIM47-202ENST00000585333 KLLNB2CW77 178 aa9.53□□□□□ -0.88
TRIM47-202ENST00000585333 IGKV3-20P01619 116 aa9.53□□□□□ -0.88
TRIM47-202ENST00000585333 ZNF705DP0CH99 300 aaPredicted RBP9.53□□□□□ -0.88
TRIM47-202ENST00000585333 ZNF705BP0CI00 300 aaPredicted RBP9.53□□□□□ -0.88
TRIM47-202ENST00000585333 FAM162BQ5T6X4 162 aa9.53□□□□□ -0.88
TRIM47-202ENST00000585333 AMTNQ6UX39 209 aa9.53□□□□□ -0.88
TRIM47-202ENST00000585333 Q8TAT8 98 aa9.53□□□□□ -0.88
TRIM47-202ENST00000585333 LINC00479Q96M42 142 aa9.53□□□□□ -0.88
TRIM47-202ENST00000585333 DERL1Q9BUN8 251 aa9.53□□□□□ -0.88
TRIM47-202ENST00000585333 XKRY2A2RUG3 117 aa9.52□□□□□ -0.89
TRIM47-202ENST00000585333 C7orf71A4D174 169 aa9.52□□□□□ -0.89
TRIM47-202ENST00000585333 CA1P00915 261 aaPredicted RBP9.52□□□□□ -0.89
TRIM47-202ENST00000585333 GCGP01275 180 aa9.52□□□□□ -0.89
TRIM47-202ENST00000585333 PFN1P07737 140 aaKnown RBP9.52□□□□□ -0.89
TRIM47-202ENST00000585333 MGST1P10620 155 aaKnown RBP9.52□□□□□ -0.89
TRIM47-202ENST00000585333 RPL35AP18077 110 aaKnown RBP9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms