RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 PDE6HQ13956 83 aa11.24□□□□□ -0.61
SKA2-209ENST00000583976 ICAM4Q14773 271 aa11.24□□□□□ -0.61
SKA2-209ENST00000583976 ZNF726P1Q15940 193 aa11.24□□□□□ -0.61
SKA2-209ENST00000583976 PQLC2Q6ZP29 291 aa11.24□□□□□ -0.61
SKA2-209ENST00000583976 IQCF2Q8IXL9 164 aa11.24□□□□□ -0.61
SKA2-209ENST00000583976 TMED6Q8WW62 240 aa11.24□□□□□ -0.61
SKA2-209ENST00000583976 AAMDCQ9H7C9 122 aa11.24□□□□□ -0.61
SKA2-209ENST00000583976 AMBPP02760 352 aa11.23□□□□□ -0.61
SKA2-209ENST00000583976 FHITP49789 147 aa11.23□□□□□ -0.61
SKA2-209ENST00000583976 C12orf74Q32Q52 190 aa11.23□□□□□ -0.61
SKA2-209ENST00000583976 OR8A1Q8NGG7 326 aa11.23□□□□□ -0.61
SKA2-209ENST00000583976 SLC35B3Q9H1N7 401 aa11.23□□□□□ -0.61
SKA2-209ENST00000583976 CTXND1A0A1B0GTU2 59 aa11.22□□□□□ -0.61
SKA2-209ENST00000583976 A0A1B0GVY2 172 aa11.22□□□□□ -0.61
SKA2-209ENST00000583976 DUSP14O95147 198 aaKnown RBP11.22□□□□□ -0.61
SKA2-209ENST00000583976 FGF8P55075 233 aaPredicted RBP11.22□□□□□ -0.61
SKA2-209ENST00000583976 NUTF2P61970 127 aaKnown RBP11.22□□□□□ -0.61
SKA2-209ENST00000583976 STOML3Q8TAV4 291 aa11.22□□□□□ -0.61
SKA2-209ENST00000583976 Q9H3A6 140 aa11.22□□□□□ -0.61
SKA2-209ENST00000583976 XCL2Q9UBD3 114 aa11.22□□□□□ -0.61
SKA2-209ENST00000583976 DEFB131BA0A096LNP1 70 aa11.21□□□□□ -0.61
SKA2-209ENST00000583976 CXorf1O96002 111 aa11.21□□□□□ -0.61
SKA2-209ENST00000583976 GCHFRP30047 84 aa11.21□□□□□ -0.61
SKA2-209ENST00000583976 SLC51BQ86UW2 128 aa11.21□□□□□ -0.61
SKA2-209ENST00000583976 OR10J6PQ8NGY7 276 aa11.21□□□□□ -0.61
SKA2-209ENST00000583976 FAM213BQ8TBF2 198 aa11.21□□□□□ -0.61
SKA2-209ENST00000583976 PPP1R14DQ9NXH3 145 aa11.21□□□□□ -0.61
SKA2-209ENST00000583976 PRELID1Q9Y255 219 aa11.21□□□□□ -0.61
SKA2-209ENST00000583976 PGPA6NDG6 321 aa11.2□□□□□ -0.62
SKA2-209ENST00000583976 MRPL53Q96EL3 112 aaKnown RBP11.2□□□□□ -0.62
SKA2-209ENST00000583976 TMPRSS5Q9H3S3 457 aa11.2□□□□□ -0.62
SKA2-209ENST00000583976 BOLA1Q9Y3E2 137 aa11.2□□□□□ -0.62
SKA2-209ENST00000583976 IGKV2-40A0A087WW87 121 aaPredicted RBP11.19□□□□□ -0.62
SKA2-209ENST00000583976 MAP1LC3B2A6NCE7 125 aa11.19□□□□□ -0.62
SKA2-209ENST00000583976 UMAD1C9J7I0 102 aa11.19□□□□□ -0.62
SKA2-209ENST00000583976 M0R2N4 97 aa11.19□□□□□ -0.62
SKA2-209ENST00000583976 M0R2Z0 102 aa11.19□□□□□ -0.62
SKA2-209ENST00000583976 IGKV2D-40P01614 121 aaPredicted RBP11.19□□□□□ -0.62
SKA2-209ENST00000583976 ERCC8Q13216 396 aa11.19□□□□□ -0.62
SKA2-209ENST00000583976 SPINK13Q1W4C9 94 aa11.19□□□□□ -0.62
SKA2-209ENST00000583976 AMTNQ6UX39 209 aa11.19□□□□□ -0.62
SKA2-209ENST00000583976 LYPD1Q8N2G4 141 aa11.19□□□□□ -0.62
SKA2-209ENST00000583976 CLUHP3Q96NS8 147 aa11.19□□□□□ -0.62
SKA2-209ENST00000583976 MAP1LC3BQ9GZQ8 125 aa11.19□□□□□ -0.62
SKA2-209ENST00000583976 RPH3ALQ9UNE2 315 aa11.19□□□□□ -0.62
SKA2-209ENST00000583976 HSPG2P98160 4391 aa11.19□□□□□ -0.62
SKA2-209ENST00000583976 A0A1B0GV50 99 aa11.18□□□□□ -0.62
SKA2-209ENST00000583976 RTL8CO15255 209 aa11.18□□□□□ -0.62
SKA2-209ENST00000583976 CSN1S1P47710 185 aa11.18□□□□□ -0.62
SKA2-209ENST00000583976 EIF5AL1Q6IS14 154 aaKnown RBP11.18□□□□□ -0.62
SKA2-209ENST00000583976 C1QTNF4Q9BXJ3 329 aa11.18□□□□□ -0.62
SKA2-209ENST00000583976 OTORQ9NRC9 128 aa11.18□□□□□ -0.62
SKA2-209ENST00000583976 TMEM167BQ9NRX6 74 aa11.18□□□□□ -0.62
SKA2-209ENST00000583976 IGHV3OR16-12A0A075B7B8 117 aa11.17□□□□□ -0.62
SKA2-209ENST00000583976 A8MTW9 85 aa11.17□□□□□ -0.62
SKA2-209ENST00000583976 EMP1P54849 157 aa11.17□□□□□ -0.62
SKA2-209ENST00000583976 FAM74A1Q5RGS3 127 aa11.17□□□□□ -0.62
SKA2-209ENST00000583976 LINC00336Q6ZUF6 198 aa11.17□□□□□ -0.62
SKA2-209ENST00000583976 CMTM2Q8TAZ6 248 aa11.17□□□□□ -0.62
SKA2-209ENST00000583976 SUN5Q8TC36 379 aa11.17□□□□□ -0.62
SKA2-209ENST00000583976 SFT2D1Q8WV19 159 aa11.17□□□□□ -0.62
SKA2-209ENST00000583976 TRAV12-2A0A075B6T6 113 aa11.16□□□□□ -0.62
SKA2-209ENST00000583976 NPIPB6E9PJ23 425 aa11.16□□□□□ -0.62
SKA2-209ENST00000583976 BOLA2-SMG1P6H3BVE0 249 aa11.16□□□□□ -0.62
SKA2-209ENST00000583976 J3KRW8 73 aa11.16□□□□□ -0.62
SKA2-209ENST00000583976 CT45A10P0DMU9 189 aa11.16□□□□□ -0.62
SKA2-209ENST00000583976 UBE2G2P60604 165 aa11.16□□□□□ -0.62
SKA2-209ENST00000583976 GNG5P63218 68 aa11.16□□□□□ -0.62
SKA2-209ENST00000583976 DPPA3Q6W0C5 159 aa11.16□□□□□ -0.62
SKA2-209ENST00000583976 POM121L12Q8N7R1 296 aa11.16□□□□□ -0.62
SKA2-209ENST00000583976 VGLL1Q99990 258 aa11.16□□□□□ -0.62
SKA2-209ENST00000583976 AGPAT4-IT1Q9H0P7 198 aa11.16□□□□□ -0.62
SKA2-209ENST00000583976 PRSS29PA6NIE9 313 aa11.15□□□□□ -0.62
SKA2-209ENST00000583976 SLC25A5P05141 298 aaKnown RBP11.15□□□□□ -0.62
SKA2-209ENST00000583976 H2AFB1P0C5Y9 115 aa11.15□□□□□ -0.62
SKA2-209ENST00000583976 SUMO1P63165 101 aaKnown RBP11.15□□□□□ -0.62
SKA2-209ENST00000583976 ZNF705AQ6ZN79 300 aaPredicted RBP11.15□□□□□ -0.62
SKA2-209ENST00000583976 RXFP4Q8TDU9 374 aa11.15□□□□□ -0.62
SKA2-209ENST00000583976 MBD3L1Q8WWY6 194 aa11.15□□□□□ -0.62
SKA2-209ENST00000583976 NDUFAF3Q9BU61 184 aa11.15□□□□□ -0.62
SKA2-209ENST00000583976 LRP1BQ9NZR2 4599 aa11.14□□□□□ -0.63
SKA2-209ENST00000583976 IGLV2-18A0A075B6J9 118 aa11.14□□□□□ -0.63
SKA2-209ENST00000583976 DIRC3C9JPN6 131 aa11.14□□□□□ -0.63
SKA2-209ENST00000583976 CRXO43186 299 aaPredicted RBP11.14□□□□□ -0.63
SKA2-209ENST00000583976 P0DMU3 169 aa11.14□□□□□ -0.63
SKA2-209ENST00000583976 FAM231AP0DMU4 169 aa11.14□□□□□ -0.63
SKA2-209ENST00000583976 FAM231CP0DMU5 169 aa11.14□□□□□ -0.63
SKA2-209ENST00000583976 SULT1A2P50226 295 aa11.14□□□□□ -0.63
SKA2-209ENST00000583976 RAB5CP51148 216 aa11.14□□□□□ -0.63
SKA2-209ENST00000583976 KIR3DS1Q14943 382 aa11.14□□□□□ -0.63
SKA2-209ENST00000583976 TMEM78Q5T7P6 136 aa11.14□□□□□ -0.63
SKA2-209ENST00000583976 ALKAL2Q6UX46 152 aa11.14□□□□□ -0.63
SKA2-209ENST00000583976 LINC00477Q96M19 166 aa11.14□□□□□ -0.63
SKA2-209ENST00000583976 YTHDF2Q9Y5A9 579 aaKnown RBP11.14□□□□□ -0.63
SKA2-209ENST00000583976 GGTLC3B5MD39 225 aa11.13□□□□□ -0.63
SKA2-209ENST00000583976 CDKN1BP46527 198 aa11.13□□□□□ -0.63
SKA2-209ENST00000583976 C9orf47Q6ZRZ4 202 aa11.13□□□□□ -0.63
SKA2-209ENST00000583976 GOLT1AQ6ZVE7 132 aa11.13□□□□□ -0.63
SKA2-209ENST00000583976 C1orf158Q8N1D5 194 aa11.13□□□□□ -0.63
SKA2-209ENST00000583976 Q8TAT8 98 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 341.2 ms