RNA–Protein interactions for RNA: ENST00000580540.1

SREBF1-219, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-219ENST00000580540 TMEM78Q5T7P6 136 aa11.78□□□□□ -0.52
SREBF1-219ENST00000580540 TMEM88Q6PEY1 159 aa11.78□□□□□ -0.52
SREBF1-219ENST00000580540 HSD17B11Q8NBQ5 300 aa11.78□□□□□ -0.52
SREBF1-219ENST00000580540 TMEM263Q8WUH6 116 aaKnown RBP11.78□□□□□ -0.52
SREBF1-219ENST00000580540 ZNF503Q96F45 646 aa11.78□□□□□ -0.52
SREBF1-219ENST00000580540 VGLL1Q99990 258 aa11.78□□□□□ -0.52
SREBF1-219ENST00000580540 C7orf71A4D174 169 aa11.77□□□□□ -0.53
SREBF1-219ENST00000580540 F5H768 121 aa11.77□□□□□ -0.53
SREBF1-219ENST00000580540 GPX1P07203 203 aa11.77□□□□□ -0.53
SREBF1-219ENST00000580540 GIPP09681 153 aaPredicted RBP11.77□□□□□ -0.53
SREBF1-219ENST00000580540 P0DMU3 169 aa11.77□□□□□ -0.53
SREBF1-219ENST00000580540 FAM231AP0DMU4 169 aa11.77□□□□□ -0.53
SREBF1-219ENST00000580540 FAM231CP0DMU5 169 aa11.77□□□□□ -0.53
SREBF1-219ENST00000580540 M6PRP20645 277 aa11.77□□□□□ -0.53
SREBF1-219ENST00000580540 ZNF266Q14584 549 aa11.77□□□□□ -0.53
SREBF1-219ENST00000580540 C9orf47Q6ZRZ4 202 aa11.77□□□□□ -0.53
SREBF1-219ENST00000580540 RNASE8Q8TDE3 154 aaKnown RBP11.77□□□□□ -0.53
SREBF1-219ENST00000580540 FAM210BQ96KR6 192 aa11.77□□□□□ -0.53
SREBF1-219ENST00000580540 Q9H3A6 140 aa11.77□□□□□ -0.53
SREBF1-219ENST00000580540 SNURFLB1AK76 121 aa11.76□□□□□ -0.53
SREBF1-219ENST00000580540 HMGB3O15347 200 aaKnown RBP11.76□□□□□ -0.53
SREBF1-219ENST00000580540 CD300CQ08708 224 aa11.76□□□□□ -0.53
SREBF1-219ENST00000580540 BTN1A1Q13410 526 aa11.76□□□□□ -0.53
SREBF1-219ENST00000580540 UBE2DNLQ8IWF7 75 aa11.76□□□□□ -0.53
SREBF1-219ENST00000580540 INO80EQ8NBZ0 244 aaPredicted RBP11.76□□□□□ -0.53
SREBF1-219ENST00000580540 OR10G4Q8NGN3 311 aa11.76□□□□□ -0.53
SREBF1-219ENST00000580540 OR10G9Q8NGN4 311 aa11.76□□□□□ -0.53
SREBF1-219ENST00000580540 OR10G7Q8NGN6 311 aa11.76□□□□□ -0.53
SREBF1-219ENST00000580540 HYLS1Q96M11 299 aa11.76□□□□□ -0.53
SREBF1-219ENST00000580540 AQP10Q96PS8 301 aa11.76□□□□□ -0.53
SREBF1-219ENST00000580540 DNAH6Q9C0G6 4158 aa11.75□□□□□ -0.53
SREBF1-219ENST00000580540 FXYD6-FXYD2A0A087WZ82 144 aa11.75□□□□□ -0.53
SREBF1-219ENST00000580540 ATP5G1P05496 136 aa11.75□□□□□ -0.53
SREBF1-219ENST00000580540 ATP5G3P48201 142 aa11.75□□□□□ -0.53
SREBF1-219ENST00000580540 POM121L12Q8N7R1 296 aa11.75□□□□□ -0.53
SREBF1-219ENST00000580540 PYGO2Q9BRQ0 406 aa11.75□□□□□ -0.53
SREBF1-219ENST00000580540 DNAH10Q8IVF4 4471 aa11.75□□□□□ -0.53
SREBF1-219ENST00000580540 CBY3A6NI87 242 aa11.74□□□□□ -0.53
SREBF1-219ENST00000580540 KLLNB2CW77 178 aa11.74□□□□□ -0.53
SREBF1-219ENST00000580540 ZNF138P52744 262 aa11.74□□□□□ -0.53
SREBF1-219ENST00000580540 LYPD1Q8N2G4 141 aa11.74□□□□□ -0.53
SREBF1-219ENST00000580540 OR2T35Q8NGX2 323 aa11.74□□□□□ -0.53
SREBF1-219ENST00000580540 Q8TAT8 98 aa11.74□□□□□ -0.53
SREBF1-219ENST00000580540 ASB13Q8WXK3 278 aa11.74□□□□□ -0.53
SREBF1-219ENST00000580540 FAM19A4Q96LR4 140 aa11.74□□□□□ -0.53
SREBF1-219ENST00000580540 ZNF492Q9P255 531 aa11.74□□□□□ -0.53
SREBF1-219ENST00000580540 RPH3ALQ9UNE2 315 aa11.74□□□□□ -0.53
SREBF1-219ENST00000580540 GAGE12BA1L429 117 aa11.73□□□□□ -0.53
SREBF1-219ENST00000580540 PGPA6NDG6 321 aa11.73□□□□□ -0.53
SREBF1-219ENST00000580540 GAGE7O76087 117 aa11.73□□□□□ -0.53
SREBF1-219ENST00000580540 GAGE12FP0CL80 117 aa11.73□□□□□ -0.53
SREBF1-219ENST00000580540 GAGE12GP0CL81 117 aa11.73□□□□□ -0.53
SREBF1-219ENST00000580540 GAGE12IP0CL82 117 aa11.73□□□□□ -0.53
SREBF1-219ENST00000580540 ATP6V0CP27449 155 aa11.73□□□□□ -0.53
SREBF1-219ENST00000580540 PQLC2Q6ZP29 291 aa11.73□□□□□ -0.53
SREBF1-219ENST00000580540 ZNF324O75467 553 aaPredicted RBP11.72□□□□□ -0.53
SREBF1-219ENST00000580540 CRISP2P16562 243 aa11.72□□□□□ -0.53
SREBF1-219ENST00000580540 CDC34P49427 236 aaPredicted RBP11.72□□□□□ -0.53
SREBF1-219ENST00000580540 PRR9Q5T870 116 aa11.72□□□□□ -0.53
SREBF1-219ENST00000580540 ZFAND2AQ8N6M9 145 aa11.72□□□□□ -0.53
SREBF1-219ENST00000580540 CMTM2Q8TAZ6 248 aa11.72□□□□□ -0.53
SREBF1-219ENST00000580540 RXFP4Q8TDU9 374 aa11.72□□□□□ -0.53
SREBF1-219ENST00000580540 OTORQ9NRC9 128 aa11.72□□□□□ -0.53
SREBF1-219ENST00000580540 BIRC6Q9NR09 4857 aa11.72□□□□□ -0.53
SREBF1-219ENST00000580540 DIRC3C9JPN6 131 aa11.71□□□□□ -0.53
SREBF1-219ENST00000580540 M0R2N4 97 aa11.71□□□□□ -0.53
SREBF1-219ENST00000580540 RGS13O14921 159 aa11.71□□□□□ -0.53
SREBF1-219ENST00000580540 NUDT3O95989 172 aa11.71□□□□□ -0.53
SREBF1-219ENST00000580540 NMBP08949 121 aa11.71□□□□□ -0.53
SREBF1-219ENST00000580540 OR5I1Q13606 314 aa11.71□□□□□ -0.53
SREBF1-219ENST00000580540 FAM74A1Q5RGS3 127 aa11.71□□□□□ -0.53
SREBF1-219ENST00000580540 EIF4E3Q8N5X7 224 aaKnown RBP11.71□□□□□ -0.53
SREBF1-219ENST00000580540 C15orf53Q8NAA6 179 aa11.71□□□□□ -0.53
SREBF1-219ENST00000580540 OR2G3Q8NGZ4 309 aa11.71□□□□□ -0.53
SREBF1-219ENST00000580540 PSMG3Q9BT73 122 aaPredicted RBP11.71□□□□□ -0.53
SREBF1-219ENST00000580540 SH3BGRL3Q9H299 93 aa11.71□□□□□ -0.53
SREBF1-219ENST00000580540 GSN-AS1Q9NRJ2 163 aa11.71□□□□□ -0.53
SREBF1-219ENST00000580540 BORCS7-ASMTA0A0B4J1R7 106 aa11.7□□□□□ -0.54
SREBF1-219ENST00000580540 RNF222A6NCQ9 220 aa11.7□□□□□ -0.54
SREBF1-219ENST00000580540 ARL14EPLP0DKL9 152 aa11.7□□□□□ -0.54
SREBF1-219ENST00000580540 RPL7L1Q6DKI1 246 aaKnown RBP11.7□□□□□ -0.54
SREBF1-219ENST00000580540 Q6ZQT7 251 aa11.7□□□□□ -0.54
SREBF1-219ENST00000580540 ZNF680Q8NEM1 530 aa11.7□□□□□ -0.54
SREBF1-219ENST00000580540 TNFSF18Q9UNG2 199 aa11.7□□□□□ -0.54
SREBF1-219ENST00000580540 RBAKDNA6NC62 111 aa11.69□□□□□ -0.54
SREBF1-219ENST00000580540 MBP02144 154 aa11.69□□□□□ -0.54
SREBF1-219ENST00000580540 Q6ZTI0 123 aa11.69□□□□□ -0.54
SREBF1-219ENST00000580540 RAB24Q969Q5 203 aa11.69□□□□□ -0.54
SREBF1-219ENST00000580540 ARPC5LQ9BPX5 153 aa11.69□□□□□ -0.54
SREBF1-219ENST00000580540 ATG101Q9BSB4 218 aa11.69□□□□□ -0.54
SREBF1-219ENST00000580540 IGLV2-18A0A075B6J9 118 aa11.68□□□□□ -0.54
SREBF1-219ENST00000580540 IGHV1OR15-1A0A075B7D0 117 aa11.68□□□□□ -0.54
SREBF1-219ENST00000580540 STAG3L2P0CL84 134 aa11.68□□□□□ -0.54
SREBF1-219ENST00000580540 STAG3L3P0CL85 134 aa11.68□□□□□ -0.54
SREBF1-219ENST00000580540 SERF2P84101 59 aa11.68□□□□□ -0.54
SREBF1-219ENST00000580540 ANXA2RQ3ZCQ2 193 aa11.68□□□□□ -0.54
SREBF1-219ENST00000580540 MUC21Q5SSG8 566 aa11.68□□□□□ -0.54
SREBF1-219ENST00000580540 GOLT1AQ6ZVE7 132 aa11.68□□□□□ -0.54
SREBF1-219ENST00000580540 IQCF2Q8IXL9 164 aa11.68□□□□□ -0.54
SREBF1-219ENST00000580540 LINC00612Q8N6U2 182 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 106.1 ms